From owner-acedb@net.bio.net Sun May 02 16:47:00 1999 Path: biosci!GREENGENES.CIT.CORNELL.EDU!matthews From: matthews@GREENGENES.CIT.CORNELL.EDU ("Dave Matthews") Newsgroups: bionet.software.acedb Subject: Re: case-sensitive searching Date: 2 May 1999 10:47:01 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 16 Sender: daemon@net.bio.net Distribution: world Message-ID: <9905021741.AA25959@greengenes.cit.cornell.edu> NNTP-Posting-Host: net.bio.net > To: acedb@net.bio.net > From: matthews@greengenes.cit.cornell.edu ("Dave Matthews") > Subject: case-sensitive searching > Date: 26 Apr 1999 20:12:22 -0700 For those who read my complaint and may have been concerned about this deficiency: The ace development team has been very responsive and helpful. A provisional fix has already been provided, ftp://ncbi.nlm.nih.gov//repository/acedb/test/source.4_7.test.tar.gz Beware that this is experimental unsupported code -- doesn't even compile on all platforms. But it is working robustly for me. So I believe the next release will be fixed for the case-sensitivity problem. Thanks guys! - Dave From owner-acedb@net.bio.net Mon May 03 08:12:00 1999 Path: biosci!AELIAN.GEOG.NOTTINGHAM.AC.UK!fua65 From: fua65@AELIAN.GEOG.NOTTINGHAM.AC.UK (rwegyua) Newsgroups: bionet.software.acedb Subject: Quick Money. Date: 3 May 1999 02:12:43 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 53 Sender: daemon@net.bio.net Distribution: world Message-ID: <199905031650UAA1656@bumretde.munkuey.mit.edu.tw> NNTP-Posting-Host: net.bio.net Hello. This is the answer to : $$$ QUICK MONEY $$$ PLEASE READ THE FOLLOWING VERY CAREFULLY. PRINT OUT THIS MESSAGE AND FOLLOW EACH STEP TO YOUR FINANCIAL FREEDOM. This is the opportunity of a lifetime, so read on ! ! Here is a chance to make $1,500 to $30,000 dollars by spending 30 minutes of your time. I know what you are probably saying because I said the same thing. 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We honor all remove requests. 356nd69e-fc156k-d5trea5 sW 356nd From owner-acedb@net.bio.net Mon May 03 12:45:00 1999 Path: biosci!news.stanford.edu!newsfeed.stanford.edu!uchinews2!newsswitch.lcs.mit.edu!sunqbc.risq.qc.ca!newsfeed.nacamar.de!newsfeed.nacamar.de!news-fra.pop.de!diablo.dera.gov.uk!server1.netnews.ja.net!hgmp.mrc.ac.uk!biosci From: mieg@alpha.crbm.cnrs-mop.fr (Danielle et jean Thierry-Mieg) Newsgroups: bionet.software.acedb Subject: maps Date: 3 May 1999 14:39:51 +0100 Organization: MRC Human Genome Mapping Project Resource Centre Lines: 31 Message-ID: <199905031339.PAA17053@alpha.crbm.cnrs-mop.fr> NNTP-Posting-Host: mercury.hgmp.mrc.ac.uk X-Trace: niobium.hgmp.mrc.ac.uk 925738792 3436 193.62.192.80 (3 May 1999 13:39:52 GMT) X-Complaints-To: news@hgmp.mrc.ac.uk NNTP-Posting-Date: 3 May 1999 13:39:52 GMT X-Received: from mserv1.dl.ac.uk (root@mserv1.dl.ac.uk [148.79.160.65]) by hgmp.mrc.ac.uk (8.9.3/8.9.3) with ESMTP id OAA01744 for ; Mon, 3 May 1999 14:39:49 +0100 (BST) X-Received: from xerxes.crbm.cnrs-mop.fr (root@xerxes.crbm.cnrs-mop.fr [193.49.189.10]) by mserv1.dl.ac.uk with ESMTP id OAA08313 (8.8.8/5.4[ref postmaster@dl.ac.uk] for dl.ac.uk from mieg@alpha.crbm.cnrs-mop.fr); Mon, 3 May 1999 14:39:57 +0100 (BST) X-Precedence: first-class X-Received: from eta.crbm.cnrs-mop.fr (IDENT:root@eta [193.49.189.67]) by xerxes.crbm.cnrs-mop.fr (8.9.1a/jtpda-5.3.1) with ESMTP id PAA26212 for ; Mon, 3 May 1999 15:39:48 +0200 X-Received: from alpha.crbm.cnrs-mop.fr (alpha.crbm.cnrs-mop.fr [193.49.189.71]) by eta.crbm.cnrs-mop.fr (8.9.1a/jtpda-5.3.1) with ESMTP id PAA05853 for ; Mon, 3 May 1999 15:39:48 +0200 X-Received: from (mieg@localhost) by alpha.crbm.cnrs-mop.fr (8.9.3/jtpda-5.3.1) id PAA17053 for acedb@dl.ac.uk; Mon, 3 May 1999 15:39:47 +0200 (MET DST) X-To: acedb@dl.ac.uk i can explain maps simply the model says ?Map Contains ?ZZZ XREF Map ?ZZZ Map ?Map #map_position the data says zzz z1 map II Position 2.3 zzz z2 map II Position 4.3 reading this and displaying map II will show the map with the 2 zzz objects on it if GMAP is selected as the preferred display for class ZZZ in options.wrm, zzz objects will show by defautl on the map editing the map object II itself will allow better centerring etc and one should also taylor the View, using the View button of tha map display --- From owner-acedb@net.bio.net Mon May 03 13:14:00 1999 Reply-To: "Norman" From: "Norman" Newsgroups: bionet.software.acedb Subject: NEW AND CHEAP SOFTWARES! Date: Mon, 3 May 1999 16:06:46 +0400 Lines: 12 X-Priority: 3 X-MSMail-Priority: Normal X-Newsreader: Microsoft Outlook Express 5.00.2314.1300 X-MimeOLE: Produced By Microsoft MimeOLE V5.00.2314.1300 NNTP-Posting-Host: dialup29.sia.telecom.lt Message-ID: <372dae13@news.takas.lt> X-Trace: 3 May 1999 16:09:23 +0100, dialup29.sia.telecom.lt Path: biosci!rutgers!rockyd.rockefeller.edu!news-nysernet-5.sprintlink.net!news-east1.sprintlink.net!news-peer-europe.sprintlink.net!news.sprintlink.net!news.algonet.se!algonet!masternews.telia.net!news.takas.lt!dialup29.sia.telecom.lt We have professional cracked full English version softwares We can make custom Cd's with softwares by your request. We also have a big collection over one million of the new graphic, animation, musics, multimedia, projection, engineering, video programs. If you wish we will give you our website. We also can send some files over Internet up to 54MB. Please reply to: cdzcd@usa.net Fax: +441716917580 From owner-acedb@net.bio.net Tue May 04 12:35:00 1999 Path: biosci!news.stanford.edu!newsfeed.stanford.edu!newsfeed.concentric.net!feed1.news.rcn.net!rcn!news.maxwell.syr.edu!news-was.dfn.de!news-han1.dfn.de!news.gwdg.de!not-for-mail From: Mark Wilkinson Newsgroups: bionet.software.acedb Subject: Re: maps Date: Tue, 04 May 1999 13:51:19 +0200 Organization: MPIZ-Koeln Lines: 23 Message-ID: <372EDF37.268D5621@cheerful.com> References: <199905031339.PAA17053@alpha.crbm.cnrs-mop.fr> NNTP-Posting-Host: pczs01.mpiz-koeln.mpg.de Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.51 [en] (WinNT; I) X-Accept-Language: en Danielle et jean Thierry-Mieg wrote: > i can explain maps simply Um.... but I am not as smart as you think I am :-) It is not clear to me if ACEdb is able to *create* maps based *entirely* on two-point/multi-point recombination data, or if you must, by hand, assign a map position for a locus, and enter the recombination data just for the interest of other investigators (i.e. the recombination data is not actually 'used' by ACEdb to make the map but is just there for information)... I have a lot to learn... is there a website which deals with the map models in greater detail? Also the grid models are confusing me... is there a website dealing with those? Mark Curator, Dragondb - the soon-to-be Antirrhinum majus database :-) From owner-acedb@net.bio.net Sat May 08 13:15:00 1999 Path: biosci!ALLOYMAIL.COM!redrider From: redrider@ALLOYMAIL.COM ("Charlie") Newsgroups: bionet.software.acedb Subject: No regrets Date: 8 May 1999 07:15:26 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 19 Sender: daemon@net.bio.net Distribution: world Message-ID: <199905081407.XAA08544@news> NNTP-Posting-Host: net.bio.net Office chairs and furniture at just above dealer cost it is now available to you. You won't find lower prices. All products shipped directly to you from the distributor with giant savings. Just reply to: mailto:vikk@indiasite.com?subject=WHOLESALE to receive our free information. /\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\ If you wish to be removed reply to: mailto:redrider@alloymail.com?subject=remove /\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\/\ From owner-acedb@net.bio.net Tue May 11 08:35:00 1999 Path: biosci!news.stanford.edu!newsfeed.stanford.edu!logbridge.uoregon.edu!newspeer1.nac.net!newspeer.monmouth.com!news-was.dfn.de!news-han1.dfn.de!news.gwdg.de!not-for-mail From: Mark Wilkinson Newsgroups: bionet.software.acedb Subject: Public NNTP server carrying b.s.acedb? Date: Tue, 11 May 1999 10:26:56 +0200 Organization: MPIZ-Koeln Lines: 16 Message-ID: <3737E9CF.CBE75F3A@cheerful.com> NNTP-Posting-Host: pczs01.mpiz-koeln.mpg.de Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.51 [en] (WinNT; I) X-Accept-Language: en Hi Group, I am wondering if anyone knows of a publically accessible NNTP server which carries this group - I have become aware that the NNTP server that I am using now has almost NO traffic, so I am sure that I am missing most or all of the conversations in this group... if you have any suggestions please mail DIRECTLY TO ME since I probably will never see your response to this newsgroup using my NNTP server... thanks in advance! Mark DRAGONdb curator markw@cheerful.com From owner-acedb@net.bio.net Tue May 11 10:25:00 1999 Path: biosci!agate!newsfeed.berkeley.edu!newsfeed.tli.de!newsfeed1.uni2.dk!news.net.uni-c.dk!news.daimi.au.dk!lassehp From: lassehp@imv.au.dk (Lasse =?ISO-8859-1?Q?Hiller=F8e?= Petersen) Newsgroups: bionet.software.acedb Subject: Using AceDB for non-biology data? Date: Tue, 11 May 1999 13:08:18 +0200 Organization: Information & Media Science, University of Aarhus Lines: 10 Message-ID: NNTP-Posting-Host: brage.imv.aau.dk Mime-Version: 1.0 Content-Type: text/plain; charset=ISO-8859-1 Content-Transfer-Encoding: 8bit X-Trace: xinwen.daimi.au.dk 926421218 2906566 255.255.255.255 (11 May 1999 11:13:38 GMT) X-Complaints-To: news@daimi.au.dk NNTP-Posting-Date: 11 May 1999 11:13:38 GMT X-Newsreader: MT-NewsWatcher 2.4.4 I became aware of AceDB because of an article on it by Lincoln Stein. It seems to me, that AceDB might be very good for storing and retrieving various types of data, including bibliographic records and directory type information. Does anyone have experience with this, and has anyone written software for this usage, for example having AceDB as a database backend for an LDAP server, or simply some code to export selected records in LDIF format? -Lasse From owner-acedb@net.bio.net Wed May 12 17:35:00 1999 Path: biosci!news.stanford.edu!newsfeed.stanford.edu!news.ems.psu.edu!news.cis.ohio-state.edu!nntp.service.ohio-state.edu!not-for-mail From: "W. Bill Ge" Newsgroups: bionet.software.acedb Subject: problems installing Aceclient Date: Wed, 12 May 1999 14:25:19 -0400 Organization: OSU Lines: 64 Message-ID: <3739C78F.1DDF5B3F@postbox.acs.ohio-state.edu> Reply-To: ge.10@osu.edu NNTP-Posting-Host: megatron.med.ohio-state.edu Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Trace: charm.magnus.acs.ohio-state.edu 926533848 14886 140.254.61.115 (12 May 1999 18:30:48 GMT) X-Complaints-To: usenet@charm.magnus.acs.ohio-state.edu NNTP-Posting-Date: 12 May 1999 18:30:48 GMT X-Mailer: Mozilla 4.07 [en] (X11; I; Linux 2.0.36 i686) Dear all: I have the following error message while installing Aceclient. Is it normal? How can I resolve it? Other related issues I need to be careful? The folowing is the output from 'make test': SIX'; export DEFINE INC; \ cd libace && make acelib -e make[1]: Entering directory `/AceDB/Aceclient/libace' cc -c -DPOSIX messclean.c messubs.c: In function `messerror': In file included from messclean.c:26: messubs.c:356: conflicting types for `sys_errlist' /usr/include/stdio.h:221: previous declaration of `sys_errlist' make[1]: *** [messclean.o] Error 1 make[1]: Leaving directory `/AceDB/Aceclient/libace' make: *** [libace/libacecl.a] Error 2 Similar output from 'make': [megatron ]# make mkdir ./blib mkdir ./blib/lib mkdir ./blib/arch mkdir ./blib/arch/auto mkdir ./blib/arch/auto/Aceclient mkdir ./blib/lib/auto mkdir ./blib/lib/auto/Aceclient mkdir ./blib/man3 cp AceTag.pm ./blib/lib/AceTag.pm cp Aceclient.pm ./blib/lib/Aceclient.pm AutoSplitting ./blib/lib/Aceclient.pm (./blib/lib/auto/Aceclient) cp AceTagSet.pm ./blib/lib/AceTagSet.pm cp AceTagClient.pm ./blib/lib/AceTagClient.pm DEFINE='-DPOSIX'; export DEFINE INC; \ cd libace && make acelib -e make[1]: Entering directory `/AceDB/Aceclient/libace' cc -c -DPOSIX aceclient.c cc -DACEDB -DPOSIX -c aceclientlib.c -o aceclientlib.o cc -c -DPOSIX rpcace_clnt.c rpcace_clnt.c: In function `ace_server_1': rpcace_clnt.c:18: warning: passing arg 3 from incompatible pointer type rpcace_clnt.c:18: warning: passing arg 4 from incompatible pointer type rpcace_clnt.c:18: warning: passing arg 5 from incompatible pointer type rpcace_clnt.c:18: warning: passing arg 6 from incompatible pointer type cc -c -DPOSIX rpcace_xdr.c cc -c -DPOSIX freesubs.c cc -c -DPOSIX freeout.c cc -c -DPOSIX messclean.c messubs.c: In function `messerror': In file included from messclean.c:26: messubs.c:356: conflicting types for `sys_errlist' /usr/include/stdio.h:221: previous declaration of `sys_errlist' make[1]: *** [messclean.o] Error 1 make[1]: Leaving directory `/AceDB/Aceclient/libace' make: *** [libace/libacecl.a] Error 2 Thanks in advance! Bill From owner-acedb@net.bio.net Thu May 13 02:46:00 1999 Path: biosci!rutgers!rockyd.rockefeller.edu!news-nysernet-5.sprintlink.net!news-east1.sprintlink.net!news-peer-europe.sprintlink.net!news.sprintlink.net!howland.erols.net!newsfeed.concentric.net!global-news-master From: gayle@wdoutlet.com Newsgroups: bionet.software,bionet.software.acedb,bionet.software.gcg Subject: Want to buy Computer Products at Wholesale Prices?? Date: 12 May 1999 20:40:13 PDT Organization: Concentric Internet Services Lines: 3 Message-ID: <7hdhit$8sc@chronicle.concentric.net> NNTP-Posting-Host: ts004d16.aus-tx.concentric.net Xref: biosci bionet.software:23435 bionet.software.acedb:2329 bionet.software.gcg:3517 To add your name to my daily Wholesale Price list for computer software and hardware deals, please e-mail me and request to be added to the list. The list is E-mailed daily and contains incredible deals on Legitimate Software and Hardware. 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It is time you get your share of the action 800 242-0363 Ex 8212 From owner-acedb@net.bio.net Tue May 18 05:02:00 1999 Path: biosci!AOL.COM!4o14363 From: 4o14363@AOL.COM Newsgroups: bionet.software.acedb Subject: THE RULES HAVE CHANGED! Date: 17 May 1999 23:02:24 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 37 Sender: daemon@net.bio.net Distribution: world Message-ID: <199905180600.IAA22589@inet.nllecc.nedlloyd.nl> NNTP-Posting-Host: net.bio.net NET-DETECTIVE-4.0 "EASY WAY TO FIND OUT ANYTHING ABOUT ANYONE" http://3465215261/3568952145232/ NET DETECTIVE 4.0 TAKES YOU BEYOND WHAT SEARCH ENGINES CAN DO! Net Detective is an amazing new tool that allows you to find EVERYTHING you ever wanted to know about your EMPLOYEES, FRIENDS, RELATIVES, SPOUSE, NEIGHBORS, even your BOSS! You can check out ANYONE, ANYTIME, ANYWHERE, right on the internet... Here's the best part: With our new INSTANT DELIVERY-SECURE ORDER SYSTEM you can have this amazing tool in your hands in less than 60 seconds and you can be doing your own on-line investigations IMMEDIATELY. To find out more about what NET DETECTIVE 4.0 can do for YOU! CLICK HERE: http://3465215261/3568952145232/ Thanks, Gayle McNeil McNeil Software Security Software Developers Since 1995 REMOVES jason9091@excite.com From owner-acedb@net.bio.net Tue May 18 16:15:00 1999 Path: biosci!news.stanford.edu!newsfeed.stanford.edu!newsfeed.berkeley.edu!newsfeed.ecrc.net!news.belnet.be!news.vub.ac.be!bigben!gbottu From: gbottu@bigben.vub.ac.be (Guy Bottu) Newsgroups: bionet.software.acedb Subject: Where is the FAQ ? Date: 18 May 1999 16:54:41 GMT Organization: Brussels Free Universities VUB/ULB Lines: 6 Message-ID: <7hs60h$5dm$1@mach.vub.ac.be> NNTP-Posting-Host: bigben.vub.ac.be X-Newsreader: TIN [version 1.2 PL2] I take at regular intervals a look at this Newslist and I have the impression that it is a long time ago since the FAQ sheat appeared. Is this possible or did I just miss it ? Dr. Guy Bottu From owner-acedb@net.bio.net Wed May 19 10:35:00 1999 Path: biosci!news.stanford.edu!newsfeed.stanford.edu!arclight.uoregon.edu!news-xfer.newsread.com!netaxs.com!newsread.com!news.maxwell.syr.edu!nntp2.dejanews.com!nnrp1.dejanews.com!not-for-mail From: sbedberg@my-dejanews.com Newsgroups: bionet.software.acedb Subject: Re: Using AceDB for non-biology data? Date: Wed, 19 May 1999 11:22:22 GMT Organization: Deja.com - Share what you know. Learn what you don't. Lines: 33 Message-ID: <7hu6tc$rfd$1@nnrp1.deja.com> References: NNTP-Posting-Host: 169.237.8.30 X-Article-Creation-Date: Wed May 19 11:16:32 1999 GMT X-Http-User-Agent: Mozilla/4.05 [en] (WinNT; I) X-Http-Proxy: 1.0 x26.deja.com:80 (Squid/1.1.22) for client 169.237.8.30 In article , lassehp@imv.au.dk (Lasse =?ISO-8859-1?Q?Hiller=F8e?= Petersen) wrote: > I became aware of AceDB because of an article on it by Lincoln Stein. It > seems to me, that AceDB might be very good for storing and retrieving > various types of data, including bibliographic records and directory type > information. > > Does anyone have experience with this, and has anyone written software for > this usage, for example having AceDB as a database backend for an LDAP > server, or simply some code to export selected records in LDIF format? > > -Lasse Actually, I was thinking along the same lines...AceDB looked like a good way to store hierarchical directory info, epsecially since I want a fairly complex data structure including personal biographies, pictures, publications lists, and curriculum vitae. As soon as I have the time, I'll be trying it out. --== Sent via Deja.com http://www.deja.com/ ==-- ---Share what you know. Learn what you don't.--- From owner-acedb@net.bio.net Wed May 19 15:57:00 1999 Path: biosci!sb-roscoff.fr!est From: est@sb-roscoff.fr (laminaria.EST) Newsgroups: bionet.software.acedb Subject: how to use blixem from acedb? Date: 19 May 1999 09:57:15 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 15 Sender: daemon@net.bio.net Distribution: world Message-ID: <9905191651.AA27801@olrik.sb-roscoff> NNTP-Posting-Host: net.bio.net Dear acedb users, I am building an EST database using ACEDB. I have many short sequences and by using MSPcrunch, I have been able to get the different homologies in my database. Now I would like to be able to see the blast alignments for example by using blixem. How can I do that? Is there a build in function? I could save the blast result files in a folder and creat a pick_me_to_call class with a short script using blixem and MSPcrunch to crucnh on the fly. But Blixem requires a sequence file. Do I need to dump the sequences before blixeming them or can blixem use the ACEDB sequence? Thank you for reading my message. Florent Crepineau Station Biologique de Roscoff, FRANCE crepinau@sb-roscoff.fr From owner-acedb@net.bio.net Thu May 20 14:03:00 1999 Path: biosci!sb-roscoff.fr!est From: est@sb-roscoff.fr (laminaria.EST) Newsgroups: bionet.software.acedb Subject: consed2ace Date: 20 May 1999 08:03:49 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 12 Sender: daemon@net.bio.net Distribution: world Message-ID: <9905201458.AA15435@olrik.sb-roscoff> NNTP-Posting-Host: net.bio.net Dear ACEdb users, I am using phred/phrap/consed and TIGRassembler. Recently there was this paper on CAF and the various tools which go with this format. In the paper, the authors presented a script that transform a consed database to ace format through CAF. However I have not been able to find this script. Does anybody know where I could find it? Or is the phrap2ace script from the CAF package the same? Thank you for reading my message. Florent Crepineau Station Biologique de Roscoff France From owner-acedb@net.bio.net Fri May 21 12:38:00 1999 Path: biosci!MINDSPRING.COM!bretu213 From: bretu213@MINDSPRING.COM Newsgroups: bionet.software.acedb Subject: Homeworkers Needed ! Date: 21 May 1999 06:38:41 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 147 Sender: daemon@net.bio.net Distribution: world Message-ID: <199905211338.GAA28851@net.bio.net> NNTP-Posting-Host: net.bio.net Dear Future Associate, You Can Work At Home & Set Your Own Hours. Start earning Big Money in a short time NO Newspaper Advertising! Your job will be to stuff and mail envelopes for our company. You will receive $.25 for each and every envelope you stuff and mail out. Just follow our simple instructions and you will be making money as easy as 1… 2… 3 For example stuff and mail 200 envelopes and you will receive $50.00. 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There are no quotas to meet, and there no contracts to sign. You can work as much, or as little as you want. Payment for each envelope you send out is Guaranteed! Here is what you will receive when you get your first Package. Inside you will find 100 envelopes, 100 labels and 100 sales letters ready to stuff and mail As soon as you are done with stuffing and mailing these first letters, your payment will arrive shortly, thereafter. All you have to do is to order more free supplies and stuff and mail more envelopes to make more money. Our sales literature which you will be stuffing and mailing will contain information outlining our highly informative manuals that we are advertising nationwide. As a free gift you will receive a special manual valued at $24.95, absolutely free, just for joining our Home Mailers Program. Plus you will get your own special code number, so that we will know how much you are to get paid. And to make re-ordering of more envelopes, that our company supplies very simple for you. We are giving you this free bonus because we want you to be confident in our company and to ensure that we will be doing business with you for a long time. Benefits Of This Job: 1. You do not have to quit your present job, to earn more money at home 2. You can make between $2,500 to $4,500 a month depending on the amount of time you are willing to spend stuffing and mailing envelopes 3. This is a great opportunity for the students, mothers, disabled persons or those who are home bodies. To secure your position and to show us that you are serious about earning extra income at home we require a one-time registration fee of $35.00. This fee covers the cost of your initial start up package, which includes 100 envelopes, 100 labels and 100 sales letters and a manual, your registration fee will be refunded back to you shortly thereafter. Money Back Guarantee! We guarantee that as soon as you stuff and mail your first 300 envelopes You will be paid $75.00 and your registration fee will be refunded. Many of you wonder why it is necessary to pay a deposit to get a job. It is because we are looking for people that seriously want to work from home. * If 3.000 people told us they wanted to start working from home and we sent out 3.000 packages free to every one. And then half of the people decided not to work, this would be a potential loss of more than $60,000 in supply's and shipping that we have sent out to people that don't want to work We have instituted this policy to make sure that you really want to work and at least finish your first package. To Get Started Today Please Enclose Your Registration Fee of $35 Check,Cash Or Money Order and fill out the application below and mail to: AHWA CO 425 S Fairfax Blvd., STE 306 Los Angeles, CA 90036 Name_____________________________________________________ Address___________________________________________________ City____________________________________ State______________ Zip Code________________ Telephone Number(s)_________________________________________ E-mail Address______________________________________________ For all orders, please allow seven (7) days for delivery and up to 10 days. Cash and Money Orders will result in faster shipping of your package. From owner-acedb@net.bio.net Fri May 21 14:10:00 1999 Path: biosci!HOTBOT.COM!moods From: moods@HOTBOT.COM ("Billy") Newsgroups: bionet.software.acedb Subject: LOOKING FOR THE PERFECT OPPORTUNITY? Date: 21 May 1999 08:09:59 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 22 Sender: daemon@net.bio.net Distribution: world Message-ID: <199905211506.QAA29005@gatekeeper.prl.philips.co.uk> NNTP-Posting-Host: net.bio.net LOOKING FOR THE PERFECT OPPORTUNITY? Do you want to bring in the money you have been looking for, while working at home. Make money while you sleep. No selling. This program is the best in it's field, Very little competition. Free website for you to use, plus many more benefits. How does $40,000 with only 8 people under you sound? For more information please call 410-692-9900 ext. 1002 ********************************************************************* Please remove at mailto:jerryq800@yahoo.com?subject=remove ********************************************************************* From owner-acedb@net.bio.net Thu May 27 05:30:00 1999 Path: biosci!CLARAMAIL.COM!dunbar From: dunbar@CLARAMAIL.COM ("Dave") Newsgroups: bionet.software.acedb Subject: Need more business? Date: 26 May 1999 23:30:33 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 42 Sender: daemon@net.bio.net Distribution: world Message-ID: Reply-To: dunbar@claramail.com NNTP-Posting-Host: net.bio.net NEED BULK EMAIL FOR YOUR BUSINESS? FBK Enterprises has all of the solutions that you need to advertise your business on the Internet. Choose from targeted or non-targeted email lists. Don't be fooled by the other bulk email companies that don't deliver what they promised. WE ARE THE REAL THING!! We have been in business for 4 years and are reliable 24 hours a day, 7 days a week, 365 days a year. ABSOLUTELY NO DOWNTIME!!!!!! Call today at 401-433-5811 We accept Visa, Mastercard, American Express, and checks by fax. ASK ABOUT OUR VOICE MAIL BOXES THAT YOU CAN USE IN YOUR BULK EMAIL AD. CUSTOMIZE YOUR OWN MESSAGE THEN CALL AND RETRIEVE ALL OF YOUR RESPONSES. To be removed from mailing list, please reply to mailto:mannymlittle@yahoo.com From owner-acedb@net.bio.net Thu May 27 06:42:00 1999 Path: biosci!rutgers!nntp.upenn.edu!newsserver.jvnc.net!198.138.0.5!newshub.northeast.verio.net!news-out.cwix.com!newsfeed.cwix.com!202.54.1.25!news.vsnl.net.in!not-for-mail From: "Anisha" Newsgroups: bionet.software.acedb Subject: YOUNG BEAUTIFUL MODEL AVAILABLE Date: Thu, 27 May 1999 13:04:11 +0530 Organization: VSNL Lines: 175 Message-ID: <7ik0h6$je8$1@news.vsnl.net.in> NNTP-Posting-Host: ppp-185-238.bng.vsnl.net.in Mime-Version: 1.0 Content-Type: multipart/related; boundary="----=_NextPart_000_023C_01BEA841.69E4DE60"; type="multipart/alternative" X-Trace: news.vsnl.net.in 927827302 19912 203.197.185.238 (27 May 1999 17:48:22 GMT) X-Complaints-To: postmaster@news.vsnl.net.in NNTP-Posting-Date: 27 May 1999 17:48:22 GMT X-Newsreader: Microsoft Outlook Express 4.72.2106.4 X-MimeOLE: Produced By Microsoft MimeOLE V4.72.2106.4 This is a multi-part message in MIME format. ------=_NextPart_000_023C_01BEA841.69E4DE60 Content-Type: multipart/alternative; boundary="----=_NextPart_001_023D_01BEA841.69E4DE60" ------=_NextPart_001_023D_01BEA841.69E4DE60 Content-Type: text/plain; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable Hi!=20 My name is Anisha.=20 I am 24 yrs old beautiful model from Paris, I would like to accompany you (discerning gentlemen) for dining, entertainment and pleasure in Europe.=20 I've long black hair and dark eyes,a slim good figure with beautiful = face=20 I am well educated, sociable, polite and fun to be with.=20 If you'd like to arrange a liaison, you can contact me at : =20 ------=_NextPart_001_023D_01BEA841.69E4DE60 Content-Type: text/html; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable
 

Hi!
My name is Anisha.
I am 24 yrs old beautiful model = from=20 Paris,
I would like to accompany you (discerning gentlemen) for=20 dining,
entertainment and pleasure in Europe.
I've long black = hair and=20 dark eyes,a slim good figure with beautiful face
I am well educated, = sociable, polite and fun to be with.=20

If you'd like to arrange a liaison, you can contact me at :

=20

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AFFFFABRRRQB/9k= ------=_NextPart_000_023C_01BEA841.69E4DE60-- From owner-acedb@net.bio.net Thu May 27 20:38:00 1999 Path: biosci!CS.Arizona.EDU!noao!math.arizona.edu!news.Arizona.EDU!not-for-mail From: Nirav Merchant Newsgroups: bionet.software.acedb Subject: Xace and DU 4.0E error Date: Thu, 27 May 1999 14:14:05 -0700 Organization: Arizona Research Labs, University of Arizona Lines: 19 Message-ID: <374DB59D.A9C5A73D@arl.arizona.edu_no_spam> NNTP-Posting-Host: ila.neurobio.arizona.edu Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.5 [en] (WinNT; I) X-Accept-Language: en Greetings, We recently upgraded our Alpha machines to 4.0E [from 4.0B], the xace interface seems to be crashing with the error "Floating Exception" ...it initializes finds the database directory and attempts to open a window and crashes. We are using the current version of xace and it ran flawless in 4.0B DU. I also tried using the console, different X emulators, VNC and got the same results. Tace seems to run just fine ..is this a X window specific issue ?. Any idea what could go wrong ? Thanks for your time. regards, Nirav From owner-acedb@net.bio.net Fri May 28 12:57:00 1999 Path: biosci!sb-roscoff.fr!est From: est@sb-roscoff.fr (laminaria.EST) Newsgroups: bionet.software.acedb Subject: Blixem_X in the ?Method Date: 28 May 1999 06:57:06 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 10 Sender: daemon@net.bio.net Distribution: world Message-ID: <9905281351.AA16662@olrik.sb-roscoff> NNTP-Posting-Host: net.bio.net Dear ACEDB users, I wrote a few days ago about using blixem from ACEDB. With the help of Nicolas Pollet I have managed to get a blixem display of my blast results from the sequence window but unfortunatly, there is no locally maintained EMBL or swissprot database here, thus efetch is unable to find the sequences and as a result there are hyphens instead of amino acids in the blixem window display! What I understood is that it is in the ?Method model that blixem is defined (eg : Blixem_X for BLASTX method). How can I change the setting. I tried to change the blixem_script in wscripts but it is not the solution. What I would like to do is to store all my MSP crunched blast results in a folder and change Blixem_X that way it takes sequences from this folder and not from a local database. Is that possible? Or should I rather change the model and add a Pick_me_to_call function and change the BLASTX. Thank you for reading my message. Florent From owner-acedb@net.bio.net Fri May 28 15:20:00 1999 From: Springbok@Eudoramail.com Newsgroups: bionet.software.acedb Subject: Go to IAMSTUCK.COM and sort out software problems Date: Fri, 28 May 1999 16:08:15 GMT Organization: UUNET Internet Africa Lines: 3 Message-ID: <374eb201.173955932@ct-news.iafrica.com> NNTP-Posting-Host: cpt-ts531-204.mweb.co.za X-Trace: nnrp01.ops.uunet.co.za 927907691 54503 196.2.56.204 (28 May 1999 16:08:11 GMT) X-Complaints-To: abuse@iafrica.com NNTP-Posting-Date: 28 May 1999 16:08:11 GMT X-Newsreader: Forte Free Agent 1.11/32.235 Path: biosci!webtv.net!news.spies.com!news.sgi.com!nntp.primenet.com!news-peer.gip.net!news-penn.gip.net!news.gsl.net!gip.net!iafrica.com!nnrp01.iafrica.com!nnrp01.iafrica.com!not-for-mail Wonderful site where other users helped me to solve my software problems free of charge. - IAMSTUCK.COM From owner-acedb@net.bio.net Fri May 28 19:42:00 1999 Path: biosci!funaventure.com!info From: info@funaventure.com Newsgroups: bionet.software.acedb Subject: Escape!... http://www.funadventure.com Date: 28 May 1999 13:42:55 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 15 Sender: daemon@net.bio.net Distribution: world Message-ID: <20285806293210@funaventure.com> NNTP-Posting-Host: net.bio.net You feel like adventure, holidays and leisures sporting? Come on http://www.funadventure.com ____________________________________________________ Evádase....http://www.funaventure.com Tiene ganas de aventura, de vacaciones y de ocio deportivo? Pase por http://www.funaventure.com _____________________________________________________ Evadez-vous!... http://www.funadventure.com Envie d'aventure, de vacances et de loisirs sportifs? Surfer sur http://www.funadventure.com _____________________________________________________ From owner-acedb@net.bio.net Fri May 28 21:19:00 1999 Path: biosci!news.stanford.edu!newsfeed.stanford.edu!news-feed.inet.tele.dk!bofh.vszbr.cz!news.algonet.se!algonet!newsfeed.icl.net!nntp.news.xara.net!xara.net!server6.netnews.ja.net!server4.netnews.ja.net!server2.netnews.ja.net!pegasus.csx.cam.ac.uk!hgmp.mrc.ac.uk!biosci From: rd@sanger.ac.uk (Richard Durbin) Newsgroups: bionet.software.acedb Subject: Re: Blixem_X in the ?Method Date: 28 May 1999 23:13:14 +0100 Organization: MRC Human Genome Mapping Project Resource Centre Lines: 20 Message-ID: <199905282213.XAA24026@griffin.sanger.ac.uk> NNTP-Posting-Host: mercury.hgmp.mrc.ac.uk X-Trace: niobium.hgmp.mrc.ac.uk 927929594 3911 193.62.192.80 (28 May 1999 22:13:14 GMT) X-Complaints-To: news@hgmp.mrc.ac.uk NNTP-Posting-Date: 28 May 1999 22:13:14 GMT X-Received: from jess.sanger.ac.uk (jess.sanger.ac.uk [193.60.84.61]) by hgmp.mrc.ac.uk (8.9.3/8.9.3) with ESMTP id XAA09391 for ; Fri, 28 May 1999 23:13:12 +0100 (BST) X-Received: from griffin.sanger.ac.uk (rd@griffin [193.60.84.177]) by jess.sanger.ac.uk (8.8.8/8.8.7) with ESMTP id XAA07575; Fri, 28 May 1999 23:13:06 +0100 (BST) X-Received: (from rd@localhost) by griffin.sanger.ac.uk (8.8.7/8.8.7) id XAA24026; Fri, 28 May 1999 23:13:04 +0100 (BST) X-To: est@sb-roscoff.fr X-Cc: acedb@hgmp.mrc.ac.uk You can store the target sequences inside acedb as DNA or peptide objects. Then blixem gets them internally and does not use efetch. This is substantially faster as well, but can make your acedb database large. Alternatively, there is a fairly simple program efetchindex to make efetch indices for any fasta database. Contact Erik.Sonnhammer@cgr.ki.se for details. Finally, you can use any indexing system of your own that you want, and write an efetch emulator that you put in your path. I think all it needs is to take the identifier as the argument with an option -q that you can ignore, and return the sequence without any additional characters (no linebreaks or anything). Richard --- From owner-acedb@net.bio.net Sat May 29 08:07:00 1999 Path: biosci!agate!newsfeed.berkeley.edu!dispose.news.demon.net!demon!newsfeed.ecrc.net!masternews.telia.net!newsfeed.bcn.ttd.net!news.mad.ttd.net!not-for-mail From: tarifa@justa.ya (ThunderBoy. ) Newsgroups: bionet.software.acedb Subject: Looking for Cosmos 1.61 or Crack. Date: Sat, 29 May 1999 09:00:31 GMT Organization: PEPSI MAX. Message-ID: <374ec17d.2744244@news.interferr.com> Reply-To: capi@interferr.com NNTP-Posting-Host: 192.240.77.195.in-addr.arpa X-Newsreader: Forte Free Agent 1.11/32.235 Cache-Post-Path: cache0!unknown@195-57-245-19.usr.ans.es X-Cache: nntpcache 2.3.2 (see http://www.nntpcache.org/) Lines: 13 I´m trying to find Cosmos 1.61 or crack for this. Please send me some information. capi@interferr.com From owner-acedb@net.bio.net Sat May 29 23:46:00 1999 Path: biosci!UCSD.EDU!dsmith From: dsmith@UCSD.EDU (Doug Smith) Newsgroups: bionet.software.acedb Subject: View class Date: 29 May 1999 17:46:16 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 82 Sender: daemon@net.bio.net Distribution: world Message-ID: <199905300040.RAA12223@biomail.ucsd.edu> NNTP-Posting-Host: net.bio.net I have a question regarding interval object display via GMAP. I am trying to set up a protein display using Map that would display helix, strand, and turn objects as separate interval- type objects. This has all worked pretty well ... except that I can't figure out how to get each of the three types to display in each of three columns. My current complete View object for this is as follows: View : "MAP-Prot" Gmap Columns "Marker_loci" 1 Marker_points Columns "Chromosome_picture" 0 Marker_intervals Columns "Locator" 1 Locator Projection_lines_on Columns "Helices" 1 Interval_JTM Width 30 Columns "Helices" 1 Interval_JTM Names_on Columns "Helices" 1 Interval_JTM Pne CYAN Columns "Helices" 1 Interval_JTM Pe RED Columns "Helices" 1 Interval_JTM Nne BLUE Columns "Helices" 1 Interval_JTM Ne LIGHTRED Columns "Strands" 1 Interval_JTM Width 30 Columns "Strands" 1 Interval_JTM Names_on Columns "Strands" 1 Interval_JTM Pne CYAN Columns "Strands" 1 Interval_JTM Pe RED Columns "Strands" 1 Interval_JTM Nne BLUE Columns "Strands" 1 Interval_JTM Ne LIGHTRED Columns " Turns" 1 Interval_JTM Width 30 Columns " Turns" 1 Interval_JTM Names_on Columns " Turns" 1 Interval_JTM Pne CYAN Columns " Turns" 1 Interval_JTM Pe RED Columns " Turns" 1 Interval_JTM Nne BLUE Columns " Turns" 1 Interval_JTM Ne LIGHTRED Columns " Others" 1 Interval_JTM Width 30 Columns " Others" 1 Interval_JTM Names_on Columns " Others" 1 Interval_JTM Pne CYAN Columns " Others" 1 Interval_JTM Pe RED Columns " Others" 1 Interval_JTM Nne BLUE Columns " Others" 1 Interval_JTM Ne LIGHTRED Columns "Contigs" 1 Contigs Columns "Reversed_physical" 1 Reversed_physical Columns "Physical_genes" 1 Physical_genes Columns "Scale" 1 Scale Scale_unit 0.001000 Columns "Scale" 1 Scale Cursor Cursor_on Columns "Scale" 1 Scale Cursor Cursor_unit 0.001000 Columns "Two_point_data" 1 Two_point Columns "Multi_point_data" 1 Multi_point Columns "Likelihood_distribution" 1 Likelihood Columns "Sites" 1 Points Point_query "find locus" Columns "Sites" 1 Points Point_error_scale 10.000000 Columns "Sites" 1 Points Point_pne LIGHTGREEN Columns "Sites" 1 Points Point_pe RED Columns "Sites" 1 Points Point_nne LIGHTRED Columns "Sites" 1 Points Point_ne RED What I appear to need is a line that says "find helix" etc, something like the "find allele" line that I used for display of Allele point-type objects in the DictyDB MAP-full view: Columns "Null Mutant Alleles" 1 Points Point_query "find allele" Columns "Null Mutant Alleles" 1 Points Point_error_scale 10.000000 Columns "Null Mutant Alleles" 1 Points Point_pne LIGHTGREEN Columns "Null Mutant Alleles" 1 Points Point_pe RED Columns "Null Mutant Alleles" 1 Points Point_nne LIGHTRED Columns "Null Mutant Alleles" 1 Points Point_ne RED Can anyone help me out here? I could not find the info I needed in the gmap.html doc, etc., which is not to say it isn't there ... Thanks so much -Doug Doug Smith, Professor of Biology .... dsmith@ucsd.edu Department of Biology, 0116; UCSD; La Jolla CA 92093 phone: 619-534-2620 FAX: 619-534-7108 http://www-biology.ucsd.edu/others/dsmith/dnasys.html From owner-acedb@net.bio.net Sun May 30 11:48:00 1999 Path: biosci!news.stanford.edu!newsfeed.stanford.edu!newsfeed.berkeley.edu!fu-berlin.de!server1.netnews.ja.net!hgmp.mrc.ac.uk!biosci From: rd@sanger.ac.uk (Richard Durbin) Newsgroups: bionet.software.acedb Subject: Re: View class Date: 30 May 1999 13:42:48 +0100 Organization: MRC Human Genome Mapping Project Resource Centre Lines: 7 Message-ID: <199905301242.NAA28396@griffin.sanger.ac.uk> NNTP-Posting-Host: mercury.hgmp.mrc.ac.uk X-Trace: niobium.hgmp.mrc.ac.uk 928068168 9189 193.62.192.80 (30 May 1999 12:42:48 GMT) X-Complaints-To: news@hgmp.mrc.ac.uk NNTP-Posting-Date: 30 May 1999 12:42:48 GMT X-Received: from jess.sanger.ac.uk (jess.sanger.ac.uk [193.60.84.61]) by hgmp.mrc.ac.uk (8.9.3/8.9.3) with ESMTP id NAA14268 for ; Sun, 30 May 1999 13:42:46 +0100 (BST) X-Received: from griffin.sanger.ac.uk (rd@griffin [193.60.84.177]) by jess.sanger.ac.uk (8.8.8/8.8.7) with ESMTP id NAA06148; Sun, 30 May 1999 13:42:43 +0100 (BST) X-Received: (from rd@localhost) by griffin.sanger.ac.uk (8.8.7/8.8.7) id NAA28396; Sun, 30 May 1999 13:42:43 +0100 (BST) X-To: dsmith@ucsd.edu X-Cc: acedb@hgmp.mrc.ac.uk This is a little convoluted. Can't you use the PEPMAP display from 4_7, which also has Views and shows arbitrary Features and Homols according to the attached Method object, as well as the protein sequence and some other more protein-centric things? Richard --- From owner-acedb@net.bio.net Sun May 30 23:32:00 1999 Path: biosci!GREENGENES.CIT.CORNELL.EDU!matthews From: matthews@GREENGENES.CIT.CORNELL.EDU ("Dave Matthews") Newsgroups: bionet.software.acedb Subject: Re: View class Date: 30 May 1999 17:32:23 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 7 Sender: daemon@net.bio.net Distribution: world Message-ID: <9905310026.AA07052@greengenes.cit.cornell.edu> NNTP-Posting-Host: net.bio.net Hi Richard, This PEPMAP display sounds very interesting. Are there any databases that have examples of this, or documentation on how to use it? - Dave > Can't you use the PEPMAP display from 4_7, which also has Views and shows > arbitrary Features and Homols according to the attached Method object, as > well as the protein sequence and some other more protein-centric things? From owner-acedb@net.bio.net Mon May 31 08:55:00 1999 Path: biosci!news.stanford.edu!newsfeed.stanford.edu!newsfeed.berkeley.edu!newsgate.cuhk.edu.hk!newsgate.netvigator.com!news.netteens.net!usenet From: "jimmy" Newsgroups: bionet.software.acedb Subject: I want to buy a computer ! Date: Mon, 31 May 1999 17:46:40 +0800 Organization: netteens.net (Hongkong Telecom IMS) Lines: 4 Message-ID: <7itlsr$gf4$1@imsp026.netvigator.com> NNTP-Posting-Host: olkck008104.netvigator.com X-Priority: 3 X-MSMail-Priority: Normal X-Newsreader: Microsoft Outlook Express 5.00.2314.1300 X-MimeOLE: Produced By Microsoft MimeOLE V5.00.2314.1300 I have $8000 can u tell me what pc can i buy ?? From owner-acedb@net.bio.net Mon May 31 17:23:00 1999 Path: biosci!agate!newsfeed.berkeley.edu!logbridge.uoregon.edu!cyclone.mbnet.mb.ca!canopus.cc.umanitoba.ca!not-for-mail From: Brian Fristensky Newsgroups: bionet.software.acedb Subject: Re: Blixem_X in the ?Method Date: Mon, 31 May 1999 13:18:00 -0500 Organization: University of Manitoba Lines: 21 Message-ID: <3752D258.1822AC69@cc.umanitoba.ca> References: <9905281351.AA16662@olrik.sb-roscoff> NNTP-Posting-Host: brassica.cc.umanitoba.ca Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Trace: canopus.cc.umanitoba.ca 928174680 554 130.179.16.121 (31 May 1999 18:18:00 GMT) X-Complaints-To: Postmaster@cc.umanitoba.ca NNTP-Posting-Date: 31 May 1999 18:18:00 GMT X-Mailer: Mozilla 4.51 [en] (X11; U; SunOS 5.5.1 sun4u) X-Accept-Language: en "laminaria.EST" wrote: > > I wrote a few days ago about using blixem from ACEDB. With the help of Nicolas Pollet I have managed to get a blixem display of my blast results from the sequence window but unfortunatly, there is no locally maintained EMBL or swissprot database here, thus efetch is unable to find the sequences and as a result there are hyphens instead of amino acids in the blixem window display! > What I understood is that it is in the ?Method model that blixem is defined (eg : Blixem_X for BLASTX method). How can I change the setting. I tried to change the blixem_script in wscripts but it is not the solution. Whoa -- I guess I missed something. What is a ?Method object, and can these be defined within ACeDB or Blixem? Where are ?Method objects documented? =============================================================================== Brian Fristensky | Original entry for Microsoft Windows, Department of Plant Science | in the Hitchiker's Guide to University of Manitoba | the Galaxy: "Harmless". Winnipeg, MB R3T 2N2 CANADA | frist@cc.umanitoba.ca | After the release of Windows NT, this Office phone: 204-474-6085 | was changed to "Mostly harmless". FAX: 204-261-5732 | http://home.cc.umanitoba.ca/~frist/ ===============================================================================