From owner-acedb@hgmp.mrc.ac.uk Mon Jul 3 09:11:45 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id 0B91517AC0; Mon, 3 Jul 2000 09:11:44 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id 8D13317AB9; Mon, 3 Jul 2000 09:11:41 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id B6DA117B0A; Fri, 30 Jun 2000 16:03:53 +0100 (BST) Received: from briar.org (backdraft.briar.org [192.207.123.123]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 7CEA8415DD for ; Fri, 30 Jun 2000 16:03:51 +0100 (BST) Received: (from smap@localhost) by briar.org (8.9.1b+Sun/8.6.12) id LAA07384 for ; Fri, 30 Jun 2000 11:03:49 -0400 (EDT) X-Authentication-Warning: backdraft.briar.org: smap set sender to using -f Received: from mail.deja.com(64.57.170.34) by backdraft via smap (V2.1) id xma007382; Fri, 30 Jun 00 11:03:24 -0400 Received: from nnrp1.deja.com (nnrp1.deja.com [10.12.2.16]) by mail.deja.com (8.8.7/8.8.5) with ESMTP id KAA01525 for ; Fri, 30 Jun 2000 10:03:22 -0500 Received: (news@localhost) by nnrp1.deja.com (8.7.6/8.6.12) id KAA11370; Fri, 30 Jun 2000 10:03:07 -0500 To: bionet-software-acedb@moderators.isc.org From: zgudmunt@my-deja.com Newsgroups: bionet.software.acedb Subject: Re: xaceclient ? Organization: Deja.com - Before you buy. Message-ID: <8jicrb$b39$1@nnrp1.deja.com> References: <200006290756.IAA11435@jaffar.sb-roscoff.fr> X-Article-Creation-Date: Fri Jun 30 15:03:21 2000 GMT X-Http-User-Agent: Mozilla/4.7 [en] (X11; I; Linux 2.2.14-15mdk i686) X-Http-Proxy: 1.0 proxy.decode.is:8080 (Squid/2.2.STABLE5), 1.0 x68.deja.com:80 (Squid/1.1.22) for client 172.18.2.4, 213.167.128.100 X-MyDeja-Info: XMYDJUIDzgudmunt Date: Mon, 3 Jul 2000 09:11:41 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk This is my own 'holy grail' in the world of ACeDB! I think Simon should now about that. But Simon, does the new socket-server solve this problem with the Windowsclient-2-Unixserver elegantly? Mummi In article <200006290756.IAA11435@jaffar.sb-roscoff.fr>, crepinau@sb-roscoff.fr ("Florent.Crepineau") wrote: > Hello, > > I would like to know what one can do with the xaceclient. Can one connect from a windows box with the xaceclient over the net to a saceserver running on a unix box? How can I do that ? > > Thank you for reading my message > > Best Regards > > Florent > > --- > > Sent via Deja.com http://www.deja.com/ Before you buy. From owner-acedb@hgmp.mrc.ac.uk Mon Jul 3 09:11:54 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id AAD7F17AD7; Mon, 3 Jul 2000 09:11:52 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id 5064E17AD0; Mon, 3 Jul 2000 09:11:47 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id 96CD017B0A; Fri, 30 Jun 2000 16:11:48 +0100 (BST) Received: from wodc7-2.relay.mail.uu.net (wodc7-2.relay.mail.uu.net [199.171.54.115]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id D256C415D4 for ; Fri, 30 Jun 2000 16:11:42 +0100 (BST) Received: from mail.deja.com by wodc7mr0.ffx.ops.us.uu.net with ESMTP (peer crosschecked as: [64.57.170.34]) id QQivvg23295 for ; Fri, 30 Jun 2000 15:11:41 GMT Received: from nnrp1.deja.com (nnrp1.deja.com [10.12.2.16]) by mail.deja.com (8.8.7/8.8.5) with ESMTP id KAA02337 for ; Fri, 30 Jun 2000 10:11:40 -0500 Received: (news@localhost) by nnrp1.deja.com (8.7.6/8.6.12) id KAA11856; Fri, 30 Jun 2000 10:11:21 -0500 To: bionet-software-acedb@moderators.isc.org From: zgudmunt@my-deja.com Newsgroups: bionet.software.acedb Subject: More on Grid stuff Organization: Deja.com - Before you buy. Message-ID: <8jidap$bif$1@nnrp1.deja.com> X-Article-Creation-Date: Fri Jun 30 15:11:38 2000 GMT X-Http-User-Agent: Mozilla/4.7 [en] (X11; I; Linux 2.2.14-15mdk i686) X-Http-Proxy: 1.0 proxy.decode.is:8080 (Squid/2.2.STABLE5), 1.0 x51.deja.com:80 (Squid/1.1.22) for client 172.18.2.4, 213.167.128.100 X-MyDeja-Info: XMYDJUIDzgudmunt Date: Mon, 3 Jul 2000 09:11:47 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk I would like to add something to Ed's notes in the newsletter regarding the microarray-display issue: would it be possible to somehow extend the grid display (already quite flexible, in layout at least) to display much larger datasets, without requiring a massive effort to write such an array display from scratch. At least it does deserved a chance. I will be discussing this with a couple of those that are actually working with expression data and see their view on this. Perhaps I can extract some more intelligent (than mine) info on what kind of setup would be must useful for expression analysis. Mummi Sent via Deja.com http://www.deja.com/ Before you buy. From owner-acedb@hgmp.mrc.ac.uk Mon Jul 3 09:11:53 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id 010C317AC0; Mon, 3 Jul 2000 09:11:51 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id 759C017AC4; Mon, 3 Jul 2000 09:11:46 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id 0478A17B0E; Fri, 30 Jun 2000 16:05:38 +0100 (BST) Received: from chx400.switch.ch (chx400.switch.ch [130.59.10.2]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id CC98D415D5 for ; Fri, 30 Jun 2000 16:05:37 +0100 (BST) Received: from mail.deja.com ([64.57.170.34]) by chx400.switch.ch with esmtp (Exim 3.15 #3) id 1382MK-0004pm-00 for bionet-software-acedb@moderators.isc.org; Fri, 30 Jun 2000 17:05:36 +0200 Received: from nnrp1.deja.com (nnrp1.deja.com [10.12.2.16]) by mail.deja.com (8.8.7/8.8.5) with ESMTP id KAA01699 for ; Fri, 30 Jun 2000 10:05:34 -0500 Received: (news@localhost) by nnrp1.deja.com (8.7.6/8.6.12) id KAA11460; Fri, 30 Jun 2000 10:05:18 -0500 To: bionet-software-acedb@moderators.isc.org From: zgudmunt@my-deja.com Newsgroups: bionet.software.acedb Subject: Re: Constructed types in Ace 5 Organization: Deja.com - Before you buy. Message-ID: <8jicve$b63$1@nnrp1.deja.com> References: <200006291151.HAA01732@greengenes.cit.cornell.edu> X-Article-Creation-Date: Fri Jun 30 15:05:32 2000 GMT X-Http-User-Agent: Mozilla/4.7 [en] (X11; I; Linux 2.2.14-15mdk i686) X-Http-Proxy: 1.0 proxy.decode.is:8080 (Squid/2.2.STABLE5), 1.0 x71.deja.com:80 (Squid/1.1.22) for client 172.18.2.4, 213.167.128.100 X-MyDeja-Info: XMYDJUIDzgudmunt Date: Mon, 3 Jul 2000 09:11:46 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk Should I withhold my conference notes until the new acedb.org is setup, or should we post that stuff ASAP? Mummi In article , rbsk@sanger.ac.uk (Richard Bruskiewich) wrote: > Hi Dave, > > As you can imagine, acedb has taken back seat to the working draft and > EnsEMBL for the moment. I'm sure Ed will get some of the www.acedb.org > updates in place once the dust has settled around here and he can engage a > few of the team web to do the magic. > > I've had an initial chat with the wiki people here about the docs > service. again, we'll have to wait our turn at the time slicing of web > expertise. > > cheers, > richard b. > > ps. Mummi has promised us a draft of his edited Acedb '2000 proceedings > notes sometime soon. > > On Thu, 29 Jun 2000, Dave Matthews wrote: > > > Hi Carson, > > > > Sorry, that host turned into a pumpkin at the end of the meeting. > > The stuff that was there is supposed to go onto www.acedb.org. I guess > > there'll be an announcement when it's online. > > - Dave > > > > > From: Carson Thoreen > > > Newsgroups: bionet.software.acedb > > > Date: Thu, 29 Jun 2000 11:32:41 +0100 (BST) > > > > > > When I try to go to www.acedb2000.bcgsc.bc.ca to see what I've > > > missed, my browser can't find the server. Is this the correct URL? > > > > ======================================================== > Dr. Richard Bruskiewich > WWW: http://www.sanger.ac.uk/Users/rbsk/ > Human Analysis/Bioinformatics > The Sanger Centre Tel: +44-(0)1223-834244 > Wellcome Trust Genome Campus, Fax: +44-(0)1223-494919 > Hinxton, Cambridge CB10 1SA > United Kingdom > ======================================================== > > --- > > Sent via Deja.com http://www.deja.com/ Before you buy. From owner-acedb@hgmp.mrc.ac.uk Mon Jul 3 09:12:01 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id 9F2FE17AC0; Mon, 3 Jul 2000 09:12:00 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id 33AFD17AE2; Mon, 3 Jul 2000 09:11:53 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id 20C9A17B0B; Fri, 30 Jun 2000 16:01:50 +0100 (BST) Received: from chx400.switch.ch (chx400.switch.ch [130.59.10.2]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 75FEB415D5 for ; Fri, 30 Jun 2000 16:01:40 +0100 (BST) Received: from mail.deja.com ([64.57.170.34]) by chx400.switch.ch with esmtp (Exim 3.15 #3) id 1382IV-0004pI-00 for bionet-software-acedb@moderators.isc.org; Fri, 30 Jun 2000 17:01:39 +0200 Received: from nnrp1.deja.com (nnrp1.deja.com [10.12.2.16]) by mail.deja.com (8.8.7/8.8.5) with ESMTP id KAA01130 for ; Fri, 30 Jun 2000 10:01:37 -0500 Received: (news@localhost) by nnrp1.deja.com (8.7.6/8.6.12) id KAA11333; Fri, 30 Jun 2000 10:01:23 -0500 To: bionet-software-acedb@moderators.isc.org From: zgudmunt@my-deja.com Newsgroups: bionet.software.acedb Subject: Re: Calling all Acedb'ers... Organization: Deja.com - Before you buy. Message-ID: <8jico3$b23$1@nnrp1.deja.com> References: <395B2A46.938359C5@sanger.ac.uk> X-Article-Creation-Date: Fri Jun 30 15:01:35 2000 GMT X-Http-User-Agent: Mozilla/4.7 [en] (X11; I; Linux 2.2.14-15mdk i686) X-Http-Proxy: 1.0 proxy.decode.is:8080 (Squid/2.2.STABLE5), 1.0 x65.deja.com:80 (Squid/1.1.22) for client 172.18.2.4, 213.167.128.100 X-MyDeja-Info: XMYDJUIDzgudmunt Date: Mon, 3 Jul 2000 09:11:53 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk I would like to ask for additional info on the Clone grid from the Sanger-experts working with that. For example, how exactly does one do editing; find which STSs/Probes hit a particular grid, or rather, how does one find which BAC corresponds to a certain grid pattern. The manual says a few words, and some other piece of documentation covered a bit more. I found out some editing stuff myself, but it is still kind of vague in my mind. Mummi In article <395B2A46.938359C5@sanger.ac.uk>, Ed Griffiths wrote: > As I announced in an earlier append, I have been producing a monthly Newsletter > for acedb users in the Sanger Centre. At Acedb2000 we agreed that I would append > this newsletter to this newsgroup, I will be doing this later today. If you > would also like to receive the letter in text form via email then send me a note > at edgrif@sanger.ac.uk, remember that you can also access all the newsletters > at: > http://www.acedb.org/winfo/Newsletters/ > > Currently I write the Newsletter and put in it whatever I think is of interest > to Sanger users. If you would like to contribute a short article about something > you have discovered or find useful in acedb then please send it to me and I will > include it in a future Newsletter. I want the Newsletter to be of general > interest to as many acedb users as possible. > > The idea of the Newsletter is to keep users/developers in touch with what's > going on in acedb, i.e. to provide more feedback. I also want it to include > hints/tips/how-to type articles as well. > > Comments are welcome, but articles are even more welcome !! > > cheers Ed > > ------------------------------------------------------------------------------ > | Ed Griffiths, Informatics Group, | > | The Sanger Centre, Wellcome Trust Genome Campus, | > | Hinxton, Cambridge CB10 1SA, UK | > | | > | email: edgrif@sanger.ac.uk URL: http://www.sanger.ac.uk/Users/edgrif | > | Tel: +44-1223-494780 (switch +44 1223 834244) Fax: +44 1223 494919 | > ------------------------------------------------------------------------------ > > Sent via Deja.com http://www.deja.com/ Before you buy. From owner-acedb@hgmp.mrc.ac.uk Mon Jul 3 10:19:47 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id C353A17AE9; Mon, 3 Jul 2000 10:19:45 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id AEB9B17AE3; Mon, 3 Jul 2000 10:19:42 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id AC3AE17AAA; Mon, 3 Jul 2000 09:33:37 +0100 (BST) Received: from niobium.hgmp.mrc.ac.uk (niobium [193.62.192.41]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 1E35C415DA for ; Mon, 3 Jul 2000 09:33:37 +0100 (BST) Received: (from news@localhost) by niobium.hgmp.mrc.ac.uk (8.9.3+Sun/8.8.8) id JAA02566 for bionet-software-acedb@net.bio.net; Mon, 3 Jul 2000 09:33:36 +0100 (BST) To: bionet-software-acedb@net.bio.net From: Ed Griffiths Newsgroups: bionet.software.acedb Subject: Re: Conference notes Organization: Sanger Centre Message-ID: <39604FE0.F2E16A5A@sanger.ac.uk> References: <200006291151.HAA01732@greengenes.cit.cornell.edu> <8jicve$b63$1@nnrp1.deja.com> Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Trace: niobium.hgmp.mrc.ac.uk 962613216 2564 193.60.84.177 (3 Jul 2000 08:33:36 GMT) X-Complaints-To: news@net.bio.net NNTP-Posting-Date: 3 Jul 2000 08:33:36 GMT X-Mailer: Mozilla 4.7 [en] (X11; I; OSF1 V4.0 alpha) X-Accept-Language: en Date: Mon, 3 Jul 2000 10:19:42 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk Mummi, > > Should I withhold my conference notes until the new acedb.org is > setup, or should we post that stuff ASAP? > > Mummi If you are going to post the stuff to the newsgroup then do it now. If you want me to include the stuff somewhere on the acedb web site then you can send it to me straight away and I will put it on the web site. cheers Ed p.s. I am hoping that we will have a reorganisation of the web site within the next couple of weeks. ------------------------------------------------------------------------------ | Ed Griffiths, Informatics Group, | | The Sanger Centre, Wellcome Trust Genome Campus, | | Hinxton, Cambridge CB10 1SA, UK | | | | email: edgrif@sanger.ac.uk URL: http://www.sanger.ac.uk/Users/edgrif | | Tel: +44-1223-494780 (switch +44 1223 834244) Fax: +44 1223 494919 | ------------------------------------------------------------------------------ From owner-acedb@hgmp.mrc.ac.uk Mon Jul 3 18:35:02 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id 1391917AF3; Mon, 3 Jul 2000 18:35:00 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id 543D317A66; Mon, 3 Jul 2000 18:34:57 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 60001) id 9CDF117AF1; Mon, 3 Jul 2000 15:10:09 +0100 (BST) To: bionet-software-acedb@net.bio.net From: dsmith@ucsd.edu (Doug Smith) Newsgroups: bionet.software.acedb Subject: Re: More on Grid stuff Organization: BIOSCI/MRC Human Genome Mapping Project Resource Centre Message-ID: References: <8jidap$bif$1@nnrp1.deja.com> Mime-Version: 1.0 Content-Type: text/plain; charset="us-ascii" X-Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id 7C76217ADC; Mon, 3 Jul 2000 15:10:07 +0100 (BST) X-Received: from biomail.ucsd.edu (biomail.ucsd.edu [132.239.58.91]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 11169415DA for ; Mon, 3 Jul 2000 15:10:06 +0100 (BST) X-Received: from [204.210.3.167] (204-210-3-167.san.rr.com [204.210.3.167]) by biomail.ucsd.edu (8.10.2/8.10.2-IH) with ESMTP id e63EA4p05300 for ; Mon, 3 Jul 2000 07:10:04 -0700 (PDT) X-Sender: dsmith@biomail.ucsd.edu X-In-Reply-To: <8jidap$bif$1@nnrp1.deja.com> X-To: acedb@net.bio.net Date: Mon, 3 Jul 2000 18:34:57 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk I am interested in how well ACEDB can adapt to handling and display of the large data sets associated with DNA microarray analyses, Mummi. New display approaches and software are being developed by many groups, including an effort at SDSC here at UCSD. So I see two important aspects here: 1. storage and retrieval of data 2. display in various forms, either via code within ACEDB or via external called programs ala Blixem and Dotter. Two favorite data sets for development purposes here at UCSD/SDSC are the following: 1. rather early Pat Brown group data: paper: DeRisi, J.L., Iyer, V.R. and Brown, P.O., "Exploring the metabolic and genetic control of gene expression on a genomic scale", Science 278, 680-686, 1997. complete data available at: http://cmgm.stanford.edu/pbrown/explore/ 2. subsequent Brown and Botstein effort including clustering and dendrogram displays: paper: Eisen, M.B., Spellman, P.T., Brown, P.O., and Botstein, D., "Cluster analysis and display of genome-wide expression patterns", Proc. Natl. Acad. Sci. USA 95,14863-14868, 1998. complete data available at: http://rana.Stanford.EDU/clustering/ There are now of course many other data sets as well. Perhaps the ACEDB tree display would be useful in a similar dendrogram display approach? -Doug > I would like to add something to Ed's notes in the newsletter >regarding the microarray-display issue: would it be possible to somehow >extend the grid display (already quite flexible, in layout at least) to >display much larger datasets, without requiring a massive effort to >write such an array display from scratch. At least it does deserved a >chance. > > I will be discussing this with a couple of those that are actually >working with expression data and see their view on this. Perhaps I can >extract some more intelligent (than mine) info on what kind of setup >would be must useful for expression analysis. > > > Mummi > > >Sent via Deja.com http://www.deja.com/ >Before you buy. ----------------------------------------------------------------- Douglas W. Smith Professor of Biology UCSD Phone: 858-534-2620 Department of Biology, 0116 UCSD FAX: 858-534-7108 UCSD Home FAX: 858-457-3686 La Jolla, CA 92093-0116 email: dsmith@ucsd.edu Home Page: http://www.biology.ucsd.edu/others/dsmith/dnasys.html ----------------------------------------------------------------- --- From owner-acedb@hgmp.mrc.ac.uk Tue Jul 4 09:22:01 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id CD0B517B20; Tue, 4 Jul 2000 09:22:00 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id C57FE17B1B; Tue, 4 Jul 2000 09:21:58 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 60001) id 9A60417AF5; Mon, 3 Jul 2000 19:13:29 +0100 (BST) To: bionet-software-acedb@net.bio.net From: dsmith@ucsd.edu (Doug Smith) Newsgroups: bionet.software.acedb Subject: Re: More on Grid stuff Organization: BIOSCI/MRC Human Genome Mapping Project Resource Centre Message-ID: Mime-Version: 1.0 Content-Type: text/plain; charset="us-ascii" X-Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id DAE6917AF4; Mon, 3 Jul 2000 19:13:26 +0100 (BST) X-Received: from biomail.ucsd.edu (biomail.ucsd.edu [132.239.58.91]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 4BB5D415DC for ; Mon, 3 Jul 2000 19:13:24 +0100 (BST) X-Received: from [204.210.3.167] (204-210-3-167.san.rr.com [204.210.3.167]) by biomail.ucsd.edu (8.10.2/8.10.2-IH) with ESMTP id e63IDMp01660 for ; Mon, 3 Jul 2000 11:13:22 -0700 (PDT) X-Sender: dsmith@biomail.ucsd.edu X-To: acedb@net.bio.net Date: Tue, 4 Jul 2000 09:21:58 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk I also wanted to point out the ACeDB application called Axeldb: Pollet N, Schmidt HA, Gawantka V, Vingron M, Niehrs C. "Axeldb: a Xenopus laevis database focusing on gene expression." Nucleic Acids Res. 2000 Jan 1;28(1):139-40. as well as: Martinelli SD, Brown CG, Durbin R. "Gene expression and development databases for C. elegans." Semin Cell Dev Biol. 1997 Oct;8(5):459-67. Janning W. "FlyView, a Drosophila image database, and other Drosophila databases." Semin Cell Dev Biol. 1997 Oct;8(5):469-75. Ringwald M, Mangan ME, Eppig JT, Kadin JA, Richardson JE. "GXD: a gene expression database for the laboratory mouse." The Gene Expression Database Group. Nucleic Acids Res. 1999 Jan 1;27(1):106-12. Hope this is useful ... -Doug > I would like to add something to Ed's notes in the newsletter >regarding the microarray-display issue: would it be possible to somehow >extend the grid display (already quite flexible, in layout at least) to >display much larger datasets, without requiring a massive effort to >write such an array display from scratch. At least it does deserved a >chance. > > I will be discussing this with a couple of those that are actually >working with expression data and see their view on this. Perhaps I can >extract some more intelligent (than mine) info on what kind of setup >would be must useful for expression analysis. > > > Mummi > > >Sent via Deja.com http://www.deja.com/ >Before you buy. ----------------------------------------------------------------- Douglas W. Smith Professor of Biology UCSD Phone: 858-534-2620 Department of Biology, 0116 UCSD FAX: 858-534-7108 UCSD Home FAX: 858-457-3686 La Jolla, CA 92093-0116 email: dsmith@ucsd.edu Home Page: http://www.biology.ucsd.edu/others/dsmith/dnasys.html ----------------------------------------------------------------- --- From owner-acedb@hgmp.mrc.ac.uk Thu Jul 6 09:34:44 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id 1062417AB9; Thu, 6 Jul 2000 09:34:43 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id 88D4917AA6; Thu, 6 Jul 2000 09:34:42 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id AB18717B58; Wed, 5 Jul 2000 16:11:03 +0100 (BST) Received: from postfix1.free.fr (postfix1.free.fr [212.27.32.21]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id E2936415DC for ; Wed, 5 Jul 2000 16:11:01 +0100 (BST) Received: from nnrp2.proxad.net (nnrp2.proxad.net [212.27.32.76]) by postfix1.free.fr (Postfix) with ESMTP id 5CDDE281DD for ; Wed, 5 Jul 2000 17:11:00 +0200 (MEST) Received: from localhost (localhost [[UNIX: localhost]]) by nnrp2.proxad.net (8.9.3/8.9.3/Debian 8.9.3-21) id RAA10429; Wed, 5 Jul 2000 17:10:46 +0200 To: bionet-software-acedb@net.bio.net Message-ID: <396350AE.60D3DCD6@marseille.inserm.fr> From: "F. Coulier" Organization: INSERM X-Mailer: Mozilla 4.7 [en] (X11; I; Linux 2.2.11 i686) X-Accept-Language: fr-FR, en MIME-Version: 1.0 Newsgroups: bionet.software.acedb Subject: "Exploring models etc.." as postscript file Content-Type: text/plain; charset=iso-8859-1 Content-Transfer-Encoding: 8bit X-Complaints-To: abuse@proxad.net X-Trace: nnrp2.proxad.net 962809846 195.220.67.155 (Wed, 05 Jul 2000 17:10:46 CEST) NNTP-Posting-Date: Wed, 05 Jul 2000 17:10:46 CEST Date: Thu, 6 Jul 2000 09:34:42 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk Bonjour, Does anyone knows if Sam Cartinhour's "Exploring Models Design and Structure" exists as a postcript file (or anything easily printable)? I've downloaded the HTML version, but I would like to print it to read it at home. Of course, I could print it page after page from my browser, but this would take quite some time.... Thank's for your help! François -- François Coulier, mél: coulier@marseille.inserm.fr INSERM Unité 119, 27 bd Leï Roure, 13009 Marseille, France Tel: 33 (0) 4 91 75 84 11 Fax: 33 (0) 4 91 26 03 64 Site ouaibe: http://olan.marseille.inserm.fr/ From owner-acedb@hgmp.mrc.ac.uk Thu Jul 6 16:33:14 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id 74B9117B90; Thu, 6 Jul 2000 16:33:13 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id 0BB8C17AF0; Thu, 6 Jul 2000 16:33:10 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id 7D87517AB9; Thu, 6 Jul 2000 10:08:12 +0100 (BST) Received: from mailbox1.ucsd.edu (mailbox1.ucsd.edu [132.239.1.53]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 94D14415DF for ; Thu, 6 Jul 2000 10:08:10 +0100 (BST) Received: from nottingham.ac.uk (pat.ccc.nottingham.ac.uk [128.243.40.194]) by mailbox1.ucsd.edu (8.9.3/8.9.3) with ESMTP id CAA17478 for ; Thu, 6 Jul 2000 02:08:08 -0700 (PDT) Received: from oyez.ccc.nottingham.ac.uk ([128.243.241.164] helo=news.nottingham.ac.uk) by nottingham.ac.uk with esmtp (Exim 3.13 #2) id 13A7cC-00022k-00 for bionet-software-acedb@moderators.isc.org; Thu, 06 Jul 2000 10:06:36 +0100 Received: from news by news.nottingham.ac.uk with local (Exim 1.92 #1) for bionet-software-acedb@moderators.isc.org id 13A7dd-0007jp-00; Thu, 6 Jul 2000 10:08:05 +0100 To: bionet-software-acedb@moderators.isc.org From: Keith Bradnam Newsgroups: bionet.software.acedb Subject: wormbase acedb interface Organization: ACS, The University of Nottingham Message-ID: Mime-Version: 1.0 Content-Type: TEXT/PLAIN; charset=US-ASCII X-Trace: oyez.ccc.nottingham.ac.uk 962874485 29747 128.243.116.150 (6 Jul 2000 09:08:05 GMT) X-Complaints-To: usenet@news.nottingham.ac.uk NNTP-Posting-Date: 6 Jul 2000 09:08:05 GMT X-Sender: keith@thale Date: Thu, 6 Jul 2000 16:33:10 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk Hi, Does anybody know if there are plans to release the AceBrowser-style interface used at www.wormbase.org as the next release/update of AceBrowser? Or is this code available from anywhere? Keith B. ~ Keith Bradnam - Developer, Arabidopsis Genome Resource (AGR) ~ Nottingham Arabidopsis Stock Centre - http://nasc.nott.ac.uk/ ~ University Park, University of Nottingham, NG7 2RD, UK ~ Tel: (0115) 951 3091 From owner-acedb@hgmp.mrc.ac.uk Wed Jul 12 10:17:41 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id 4DD9C17B63; Wed, 12 Jul 2000 10:17:40 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id CB7F317B6A; Wed, 12 Jul 2000 10:17:35 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id C56FF17ABF; Tue, 11 Jul 2000 15:42:49 +0100 (BST) Received: from moderated.news.pipex.net (moderated.news.pipex.net [158.43.192.79]) by mercury.hgmp.mrc.ac.uk (Postfix) with SMTP id 08847415D5 for ; Tue, 11 Jul 2000 15:42:48 +0100 (BST) Received: (qmail 22578 invoked by alias); 11 Jul 2000 14:42:44 -0000 Received: (qmail 22574 invoked from network); 11 Jul 2000 14:42:43 -0000 Received: from mail.deja.com (64.57.170.34) by moderated.news.pipex.net with SMTP; 11 Jul 2000 14:42:43 -0000 Received: from nnrp1.deja.com (nnrp1.deja.com [10.12.2.16]) by mail.deja.com (8.8.7/8.8.5) with ESMTP id JAA10535 for ; Tue, 11 Jul 2000 09:42:42 -0500 Received: (news@localhost) by nnrp1.deja.com (8.7.6/8.6.12) id JAA21446; Tue, 11 Jul 2000 09:42:35 -0500 To: bionet-software-acedb@moderators.isc.org From: zgudmunt@my-deja.com Newsgroups: bionet.software.acedb Subject: Re: as postscript file: related Organization: Deja.com - Before you buy. Message-ID: <8kfbor$ku4$1@nnrp1.deja.com> References: <396350AE.60D3DCD6@marseille.inserm.fr> X-Article-Creation-Date: Tue Jul 11 14:42:40 2000 GMT X-Http-User-Agent: Mozilla/4.7 [en] (X11; I; Linux 2.2.14-15mdk i686) X-Http-Proxy: 1.0 proxy.decode.is:8080 (Squid/2.2.STABLE5), 1.0 x67.deja.com:80 (Squid/1.1.22) for client 172.18.2.4, 213.167.128.100 X-MyDeja-Info: XMYDJUIDzgudmunt Date: Wed, 12 Jul 2000 10:17:35 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk I think that when reorganizing the the documentation for the new acedb.org, it should definately be an issue to make all of it available in more formats than HTML only, portions clustered together. If the docs are maintained as, say, Latex, they can easily by converted to HTML by Latex2HTML, or converted to Postscript for printing. Have you guys thought about this, Ed? Mummi In article <396350AE.60D3DCD6@marseille.inserm.fr>, "F. Coulier" wrote: > Bonjour, > > Does anyone knows if Sam Cartinhour's "Exploring Models Design and > Structure" exists as a postcript file (or anything easily printable)? > I've downloaded the HTML version, but I would like to print it to read > it at home. Of course, I could print it page after page from my browser, > but this would take quite some time.... > > Thank's for your help! > > François > -- > François Coulier, mél: coulier@marseille.inserm.fr > INSERM Unité 119, 27 bd Leï Roure, 13009 Marseille, France > Tel: 33 (0) 4 91 75 84 11 Fax: 33 (0) 4 91 26 03 64 > Site ouaibe: http://olan.marseille.inserm.fr/ > > Sent via Deja.com http://www.deja.com/ Before you buy. From owner-acedb@hgmp.mrc.ac.uk Fri Jul 14 08:40:07 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id 008CF17AE6; Fri, 14 Jul 2000 08:40:06 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id BC84117AF8; Fri, 14 Jul 2000 08:40:01 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 60001) id 602E517ADA; Fri, 14 Jul 2000 04:13:22 +0100 (BST) To: bionet-software-acedb@net.bio.net From: mieg@ray.nlm.nih.gov (Jean Thierry-Mieg) Newsgroups: bionet.software.acedb Subject: xace looping on solaris 7 Organization: BIOSCI/MRC Human Genome Mapping Project Resource Centre Message-ID: <200007140313.XAA18851@ray.nlm.nih.gov> X-Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id 85B7017A5C; Fri, 14 Jul 2000 04:13:19 +0100 (BST) X-Received: from ncbi.nlm.nih.gov (ncbi.nlm.nih.gov [130.14.25.1]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 0F853415D4 for ; Fri, 14 Jul 2000 04:13:17 +0100 (BST) X-Received: from ray.nlm.nih.gov (ray [130.14.25.2]) by ncbi.nlm.nih.gov (8.9.3/8.9.3) with ESMTP id XAA02058; Thu, 13 Jul 2000 23:13:16 -0400 (EDT) X-Received: (from mieg@localhost) by ray.nlm.nih.gov (8.9.3+Sun/8.9.3) id XAA18851; Thu, 13 Jul 2000 23:13:16 -0400 (EDT) X-To: acedb@dl.ac.uk, acedb@net.bio.net Date: Fri, 14 Jul 2000 08:40:01 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk Ed and I have just fixed a bug that plagued all versions of acedb (4.7 and 4.8) on recent solaris machine (sparc and intel alike) the behaviour was: when you covered the mainwindow the whole screen would freze because of acedb creating an X11 event loop. you had essentially to kill xace and restart the window manager. the fix is simple and i will update the 4.7 distrib i just fixed also a simple bug that prevents the development release of aceserver to work. may be nobody saw that bug but the behavious was a message 'cannot connect' from the client these fixes will be echoed in the next weekly build i guess jean --- From owner-acedb@hgmp.mrc.ac.uk Wed Jul 19 09:17:30 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id EB6B217B2B; Wed, 19 Jul 2000 09:17:29 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id D108817A66; Wed, 19 Jul 2000 09:17:28 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 60001) id 9E68317A77; Tue, 18 Jul 2000 21:20:04 +0100 (BST) To: bionet-software-acedb@net.bio.net From: Lyle_Ryan@BERLEX.COM Newsgroups: bionet.software.acedb Subject: "Help System" problems on 4_71 xace Organization: BIOSCI/MRC Human Genome Mapping Project Resource Centre Message-ID: <88256920.006F9D22.00@rmno06.berlex.com> Mime-Version: 1.0 Content-type: text/plain; charset=us-ascii Content-Disposition: inline X-Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id EB29217AAA; Tue, 18 Jul 2000 21:20:01 +0100 (BST) X-Received: from fwallberlex.com (fwall.berlex.com [199.221.44.5]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id B28E9415CF for ; Tue, 18 Jul 2000 21:19:59 +0100 (BST) X-Received: by fwallberlex.com; id NAA23336; Tue, 18 Jul 2000 13:19:46 -0700 (PDT) X-Received: from unknown(193.202.128.162) by fwall.berlex.com via smap (V5.0) id xmaa23090; Tue, 18 Jul 00 13:19:24 -0700 X-Received: by rmno06.berlex.com(Lotus SMTP MTA v4.6.2 (693.3 8-11-1998)) id 88256920.006F9DDF ; Tue, 18 Jul 2000 13:19:09 -0700 X-Lotus-FromDomain: SCHERINGGROUP X-To: acedb@net.bio.net Date: Wed, 19 Jul 2000 09:17:28 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk I downloaded the precompiled 4_71 version for Solaris-2.6, and installation went pretty well, although I had to rename the "wspec.bin" directory into "wspec". But the "Help" button in xace doesn't work, saying "Sorry, no help available". I've made the html files in the "wdoc" directory available via the system's Netscape server. But I don't understand the reference in the NOTES file, talking about the in-line viewer reading the html files from the "whelp" directory. Duplicating the "wdoc" directory under the name of "whelp" doesn't do the trick. Also, there's a reference to the "wspec/help.wrm" file, which I don't have. Any help is appreciated. Thanks, Lyle Ryan, Berlex Laboratories lyle_ryan@berlex.com --- From owner-acedb@hgmp.mrc.ac.uk Wed Jul 19 13:43:48 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id 0DEAB17B3A; Wed, 19 Jul 2000 13:43:47 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id DDE9E17B34; Wed, 19 Jul 2000 13:43:46 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id 98A5417B2F; Wed, 19 Jul 2000 09:51:02 +0100 (BST) Received: from niobium.hgmp.mrc.ac.uk (niobium [193.62.192.41]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 04AA5415D4 for ; Wed, 19 Jul 2000 09:51:01 +0100 (BST) Received: (from news@localhost) by niobium.hgmp.mrc.ac.uk (8.9.3+Sun/8.8.8) id JAA29836 for bionet-software-acedb@net.bio.net; Wed, 19 Jul 2000 09:51:01 +0100 (BST) To: bionet-software-acedb@net.bio.net From: Ed Griffiths Newsgroups: bionet.software.acedb Subject: Re: "Help System" problems on 4_71 xace Organization: Sanger Centre Message-ID: <39756BF5.D89322B6@sanger.ac.uk> References: <88256920.006F9D22.00@rmno06.berlex.com> Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Trace: niobium.hgmp.mrc.ac.uk 963996661 29834 193.60.84.177 (19 Jul 2000 08:51:01 GMT) X-Complaints-To: news@net.bio.net NNTP-Posting-Date: 19 Jul 2000 08:51:01 GMT X-Mailer: Mozilla 4.7 [en] (X11; I; OSF1 V4.0 alpha) X-Accept-Language: en Date: Wed, 19 Jul 2000 13:43:46 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk Lyle, I'm really, really sorry, this looks like totally our fault, somehow our system for putting code on to the ftp site has got messed up. Now read on.... > I downloaded the precompiled 4_71 version for Solaris-2.6, and installation > went pretty well, although I had to rename the "wspec.bin" directory into > "wspec". OK, I didn't understand this, I didn't get a wspec.bin directory, I got the wspec as it should be. > But the "Help" button in xace doesn't work, saying "Sorry, no help > available". OK, this is because the whelp directory is missing... > I've made the html files in the "wdoc" directory available via the system's > Netscape server. But I don't understand the reference in the NOTES file, > talking about the in-line viewer reading the html files from the "whelp" > directory. Duplicating the "wdoc" directory under the name of "whelp" > doesn't do the trick. Also, there's a reference to the "wspec/help.wrm" > file, which I don't have. wdoc contains documents for developers and database administrators, it is definitely not the 'online' help for the database, make sure it stays as wdoc. whelp is the directory that contains the online help, sadly the 4_7l distribution seems to be totally missing this directory from the binaries or the source. A gross oversight. I will put a tar'd 4_7l version of the help on the ftp site today under the 4_7l directory. I can only apologise again and hope you haven't wasted too much time. We are in the process of overhauling the ftp site to make it easier to use and hopefully this sort of problem will become a thing of the past... cheers Ed ------------------------------------------------------------------------------ | Ed Griffiths, Informatics Group, | | The Sanger Centre, Wellcome Trust Genome Campus, | | Hinxton, Cambridge CB10 1SA, UK | | | | email: edgrif@sanger.ac.uk URL: http://www.sanger.ac.uk/Users/edgrif | | Tel: +44-1223-494780 (switch +44 1223 834244) Fax: +44 1223 494919 | ------------------------------------------------------------------------------ From owner-acedb@hgmp.mrc.ac.uk Wed Jul 19 13:44:01 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id 1548B17B3E; Wed, 19 Jul 2000 13:43:59 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id B8A8717B3A; Wed, 19 Jul 2000 13:43:57 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id 9BEA817B2F; Wed, 19 Jul 2000 09:33:31 +0100 (BST) Received: from niobium.hgmp.mrc.ac.uk (niobium [193.62.192.41]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id D5514415CF for ; Wed, 19 Jul 2000 09:33:30 +0100 (BST) Received: (from news@localhost) by niobium.hgmp.mrc.ac.uk (8.9.3+Sun/8.8.8) id JAA29604 for bionet-software-acedb@net.bio.net; Wed, 19 Jul 2000 09:33:30 +0100 (BST) To: bionet-software-acedb@net.bio.net From: Ed Griffiths Newsgroups: bionet.software.acedb Subject: Re: xace looping on solaris 7 Organization: Sanger Centre Message-ID: <397567DA.D5C94EB6@sanger.ac.uk> References: <200007140313.XAA18851@ray.nlm.nih.gov> Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Trace: niobium.hgmp.mrc.ac.uk 963995610 29602 193.60.84.177 (19 Jul 2000 08:33:30 GMT) X-Complaints-To: news@net.bio.net NNTP-Posting-Date: 19 Jul 2000 08:33:30 GMT X-Mailer: Mozilla 4.7 [en] (X11; I; OSF1 V4.0 alpha) X-Accept-Language: en Date: Wed, 19 Jul 2000 13:43:57 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk Probably worth noting: > Ed and I have just fixed a bug that plagued > all versions of acedb (4.7 and 4.8) on recent solaris > machine (sparc and intel alike) > the behaviour was: when you covered the mainwindow > the whole screen would freze because of acedb creating > an X11 event loop. > you had essentially to kill xace and restart the window > manager. > > the fix is simple and i will update the 4.7 distrib As far as we know this does not affect the 4_8c version, if you have Solaris 5.7 and could test xace from acedb 4_8c we would be grateful (download the July build available as Sanger-release.2000_07_14.tar.gz from the ftp site). > i just fixed also a simple bug that prevents the > development release of aceserver to work. may be nobody saw > that bug but the behavious was a message 'cannot connect' > from the client Yup, I also fixed this, it was a trivial mistake in both 4_7 and 4_8 code. cheers Ed ------------------------------------------------------------------------------ | Ed Griffiths, Informatics Group, | | The Sanger Centre, Wellcome Trust Genome Campus, | | Hinxton, Cambridge CB10 1SA, UK | | | | email: edgrif@sanger.ac.uk URL: http://www.sanger.ac.uk/Users/edgrif | | Tel: +44-1223-494780 (switch +44 1223 834244) Fax: +44 1223 494919 | ------------------------------------------------------------------------------ From owner-acedb@hgmp.mrc.ac.uk Thu Jul 27 10:07:18 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id 9796117B8B; Thu, 27 Jul 2000 10:07:15 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6019) id 5140817B34; Thu, 27 Jul 2000 10:07:13 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 60001) id D5DA317B91; Wed, 26 Jul 2000 17:54:43 +0100 (BST) To: bionet-software-acedb@net.bio.net From: Lyle_Ryan@BERLEX.COM Newsgroups: bionet.software.acedb Subject: Printing problems with Xace 4_71 on Solaris 2.6 Organization: BIOSCI/MRC Human Genome Mapping Project Resource Centre Message-ID: <88256928.005CBF06.00@rmno06.berlex.com> Mime-Version: 1.0 Content-type: text/plain; charset=us-ascii Content-Disposition: inline X-Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6024) id E582317B8E; Wed, 26 Jul 2000 17:54:29 +0100 (BST) X-Received: from fwallberlex.com (fwall.berlex.com [199.221.44.5]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 0CC07415D4 for ; Wed, 26 Jul 2000 17:54:28 +0100 (BST) X-Received: by fwallberlex.com; id JAA24313; Wed, 26 Jul 2000 09:54:12 -0700 (PDT) X-Received: from unknown(193.202.128.162) by fwall.berlex.com via smap (V5.0) id xmaa23607; Wed, 26 Jul 00 09:53:35 -0700 X-Received: by rmno06.berlex.com(Lotus SMTP MTA v4.6.2 (693.3 8-11-1998)) id 88256928.005CC0E2 ; Wed, 26 Jul 2000 09:53:06 -0700 X-Lotus-FromDomain: SCHERINGGROUP X-To: acedb@net.bio.net X-Cc: edgrif@sanger.ac.uk Date: Thu, 27 Jul 2000 10:07:13 +0100 (BST) Sender: owner-acedb@hgmp.mrc.ac.uk Precedence: bulk I'm having problems printing from xace 4_71 on Solaris 2.6. Defining ACEDB_LPR to be 'lp -dourcolorprinter' seems to work, as it shows up in the "Print/Mail Selection Screen" and a print request id message shows on my terminal session confirming submission to the proper queue. But only a banner page comes out on the printer. "Printing" a copy to a file works correctly, and I am able to "lp -dourcolorprinter filename" fine. Any ideas? And BTW, my thanks to Ed Griffiths for the solution to the "Help System" problem I was having. Thanks....Lyle Ryan Berlex Laboratories lyle_ryan@berlex.com ---