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From: cards2@chargeemnow.com
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From owner-bio-info@hgmp.mrc.ac.uk  Thu Jun  8 15:05:30 2000
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From: martyn@csc.liv.ac.uk (Martyn Amos)
Subject: M.Sc. in Biosystems and Informatics
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	M.Sc., Postgraduate Diploma and Postgraduate Certificate in 
			Biosystems & Informatics

		      The University of Liverpool

The School of Biological Sciences and the Department of Computer Science
will be offering a new one-year full-time M.Sc. in Biosystems & Informatics
from September 2000.

o The course context

This course explores the interface between two of the most dynamic and
influential subject areas of our time, biology and computing. In 1995 the
sequencing of the first genome of a free-living organism moved biology
irrevocably into the new data-rich era of bioinformatics. The availability of
the blueprint of simple organisms and, in the near future, of humans has not
of itself answered all our questions. New knowledge leads to new perspectives,
new challenges and, ultimately, the promise of new products, leading to
fundamental changes in the way that the pharmaceutical industry, for example,
goes about its business. For the moment, however, the blueprint offers a
static, incomplete and sometimes conjectural picture of the cell and organism.
Beyond the detail of connecting gene to function, what is missing is the
dynamic: a clear model of how a single gene functions within a complex network
to govern expression of the blueprint, an understanding of how the protein
folds, and a vision of how metabolic pathways and, in their turn, cells,
tissues and organs are integrated to deliver the features we commonly
recognise in living organisms. This fundamental shift would not have been
possible without the power of modern information technology. The storage,
manipulation and analysis of sequence and structural data pose leading edge
computational challenges. Progress has been greatly facilitated by development
of Web- accessible databases and applications software. Computers are also
providing the means to simulate many of the dynamic features of life that are
currently of interest and thereby to test and inform hypotheses. The flow of
benefit has not, however, been entirely in one direction into the life
sciences. Much of what we understand about the organisation of biological
processes can in turn be applied to produce new approaches to solving problems
in computer science, such as neural and evolutionary computing. The virtuous
circle is complete when these new techniques are themselves applied to
biological problems.

o The course

The M.Sc. in Biosystems & Informatics addresses the issues identified above
from the perspective of both the biologist and the computer scientist. The aim
of the course is to enable life science graduates to become conversant with
the use of computers to address biological problems by means of molecular
data (bio/informatics) and modelling of biological systems (biosystems). A
complementary aim is to provide computer science graduates with a grounding
in the life sciences sufficient to enable them to work on life science
problems and develop applications employing biological metaphors. Both areas
increasingly rely on World-Wide Web data and tools which will be a significant
feature of the course for both cohorts of students.

The course will admit students with B.Sc. degrees at a 2.II standard or better
in either: 

o A life or biomedical science underpinned by a good level of IT awareness. 
o Computer science, mathematics, engineering or other appropriate degree with
  a significant IT component. 

Biology students should ideally have an A-level in mathematics, physics or
information technology whilst for other graduates, a science A-level would be
preferred.

o Course structure

The academic year comprises three semesters and students take modules to an
equivalent of 4 points (60 CATS) in each semester.

Semester 1: Students take 1-point modules in Bioinformatics and Java
Programming. They then have a choice of two further 1-point modules chosen
according to their background from the following: Fundamental molecular
biology, Advanced topics in molecular biology, Biocomputing and Application of
information technology. Point at which Postgraduate Certificate can be awarded

Semester 2: Students take a 1.5-point module in Biosystems and continue the
theme of the first semester with a 0.5-point module entitled Case studies on
advanced topics in bioinformatics. They undertake a 1-point dissertation and
then choose one further module from the following: Knowledge-based systems,
Data structures and maintenance, Biology of information, Efficient parallel
algorithms. Point at which a Postgraduate Diploma can be awarded.

Semester 3: Students undertake a 4-point research project making use of the
new skills and perspectives they have obtained. Point at which a Masters
degree can be awarded.

In order to obtain credit for a course module that can be included in a
'record of achievement' transcript, the student must achieve a pass mark of
at least 50% in that module. The award of M.Sc. requires that a minimum of
180 credits be obtained, this representing a mark of 50% or more in all
modules. The award of a Postgraduate Diploma requires a minimum of 120 credits
and award of a Postgraduate Certificate a minimum of 60 credits.

o Careers

The employment prospects for bioinformaticians are currently very good as
there is a widely recognised shortage of trained staff, particularly at the
post-doctoral level. A survey conducted by the BBSRC estimated that there was
an immediate requirement for a 60% increase in staff numbers in the
non-medical bioscience academic sector, and a corresponding 45% increase
required in the large pharmaceutical companies. Some 60 posts are currently
advertised for the UK and Europe on the CCP11 Web noticeboard. A longer
international list can be consulted at the GenomeJobs Web site. Celera,
arguably the most ambitious and well-funded of the new US companies, claims
to be hiring one person per day at present with the majority of its staff
being software, IT, and bioinformatics professionals.

o Biocomputing at Liverpool

Liverpool is well placed to exploit these new interfacial themes. The
Department of Computer Science  has been proactive both in exploiting the new
biological paradigms in its own teaching and research and in forming
productive alliances with biologists, most notably through the auspices of
the Biocomputing Group. Dr Paton has been instrumental in establishing the
IPCAT (Information processing in cells and tissues) conference as a major
focus for international developments and more recently has piloted the
EPSRC-funded CytoCom network at a national level. Professor Gibbons secured
funding under the EPSRC/BBSRC Bioinformatics Program in the area of 
Generalised DNA Computing with viable resources.

The biosciences within the University range through the many facets of
traditional biology to biomedicine, bioengineering and veterinary and dental
sciences. Biological Sciences has obtained  HEFCE competitive funding for
creation of the new Liverpool Biosciences Centre and, in association with
other departments, has recently attract ed JREI funding for research equipment
of significance for bioinformatics development (e.g. tools for proteome
analysis, microarray robot). Genomics and proteomics are at the core of these
developments and in turn rely extensively on bioinformatics. 

o For further information 

Please contact the Course Organiser, 

	Dr Martyn Amos, 
 	School of Biological Sciences,     
	The University of Liverpool, 
	Crown Street, 
	Liverpool L69 7ZB.
	United Kingdom

	Tel:(+44) (0)151 794 4414
	Fax: (+44) (0)151 794 4401
	E-mail: mamos@liv.ac.uk

** DETAILS ON THE WEB AT http://www.csc.liv.ac.uk/~martyn/biosystems **


-- 
Dr Martyn Amos -- mamos@liv.ac.uk -- School of Biological Sciences and 
http://www.csc.liv.ac.uk/~martyn/ -- Department of Computer Science,
"Carp Diem" -- Fish of the day    -- University of Liverpool, UK




From owner-bio-info@hgmp.mrc.ac.uk  Tue Jun 13 16:46:11 2000
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From: Laurent Bloch <bloch@pasteur.fr>
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Subject: Course in informatics for Biology 2001
Date: 13 Jun 2000 15:45:57 GMT
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Course in informatics offered at the Pasteur Institute.
======================================================

In the series of courses offered at the Pasteur Institute, a course
will be offered in informatics in biology. The next session will take
place from the 3th of January to the 6th of April 2001. The course 
description is attached. 

   ----------------------------------------------------------------------
   |                                                                    |
   |	          The courses at Pasteur Institute are                  |
   |	organized with the collaboration of the two largest Parisian    |
   |	scientific universities, Paris VI "Pierre et Marie Curie" and   |
   |	Paris VII "Denis Diderot". The diplomas delivered to students   |
   |	of these courses are considered as university degrees.          |
   |                                                                    |
   ----------------------------------------------------------------------

Registration is mandatory via the committee of courses. Call the 
secretary of Information and Education of the Pasteur Institute at
+33 1 45 68 81 40 or via E-mail at algo@pasteur.fr for further
information. See also:

http://www.pasteur.fr/formation/infobio-en.html
http://www.pasteur.fr/units/sis/B6/10/10.html#8

The working language of the course is French. Tuition costs: a
nominal fee, approximately 3 000 French Francs (500 US Dollars).

Course Description
==================

Informatics in biology
----------------------

The objective of this course is to give to the researchers and future
researchers in biology, an initial exposure to informatics. Entry in
the course is reserved to those with a degree in biology or a related
discipline.

With more and more tools available to the biologist, it has become important 
that the biologist acquire the ability to judge for themselves the 
usefulness of a new software by the algorithms it employs.

The accent is put on the fundamental aspect of this discipline. Two
applications in biology will be studied, the analysis of sequences 
and molecular modeling.

The theoretic aspects of informatics will be introduced: programming 
languages, programing, logic, and also in the technical domain of 
the system, the network, and computer architecture. Programming is taught
according to the functional paradigm (Lisp), but other styles 
of programming, such as algorithmic and object oriented, will be introduced.

The goal of an excellent level of theory will not hurt the acquisition of
practical knowledge which will be directly usable in the labratory.

The course will consist of lectures and practical sessions.

   Algorithms, programming practice and theory	(course)	60h
   Algorithms and programming		practical (with Scheme)	42h
   Programming with Java			 		18h
   Programming with Java		practical		21h
   Computing systems: evolution and realizations		12h
   Introduction to Unix and X			practical	17h
   Perspectives of informatics			lecture		10h
   Algorithms for Biology
	Algorithms						36h
	Examples (Sequence analysis)		practical	36h
   Molecular modelling						15h
   Software installation (blast)				10h
   Data Bases                                                   12h
   Machine architecture and System planning			15h
   Logic							10h
   Networks							12h
====================================================================
Total							       326h

Course Instructors

	Laurent Bloch
	William Saurin
	Manuel Serrano
	Christian Queinnec
	Érick Gallesio
	Marie-France Sagot
	Daniel Azuelos
	Eric Gressier
	Thierry Rose
        Louis Jones
	Bernard Caudron
	Marc Baudoin
	Stephane Bortzmeyer
	Katja Schuerer
	Éric Deveaud





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EARN $100,000 PER YEAR SENDING E-MAIL!!!

But it's DIFFERENT .... this time, it incorporates *E-GOLD (Instant Payout!).  You do not need to send cash by mail (which has a very high risk of getting 'lost'). It is also COMPLETELY anonymous! *if you've never used e-gold, I've included some info at the bottom of this email.

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------------------------------------------------------------
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(1)	Go to:<http://www.e-gold.com/e-gold.asp?cid=138818>
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Also assume that everyone else in YOUR ORGANIZATION gets
ONLY 10 downline members.

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1st level--your 10 members with $5 .........................
$50
2nd level--10 members from those 10 ($5 x 100)..............
$500
3rd level--10 members from those 100 ($5 x 1,000)...........
$5,000
4th level--10 members from those 1,000 ($5 x 10,000)........
$50,000
----------- THIS TOTALS ------------------------------------
$55,550

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10 people each. Think for a moment what would happen if they got 20 people
to participate! Most people get 100's of participants! THINK ABOUT IT!

(5) Access your e-gold account and click on HISTORY. You can check the detail information concerning the money you received. Send out the reports people ordered from you.

All you must do is to check your e-gold account and e-mail
the report people ordered. THAT'S IT! ALWAYS PROVIDE
SAME-DAY SERVICE ON ALL ORDERS! This will guarantee that
the e-mail THEY send out, with YOUR e-gold account number on it,
will be prompt because they can't advertise until they
receive the report!

------------------------------------------------------------
AVAILABLE REPORTS
------------------------------------------------------------

*** Order Each REPORT by NUMBER ***

REPORT #1 "THE INSIDER'S GUIDE TO ADVERTISING FOR FREE ON THE INTERNET"

ORDER REPORT #1 FROM:
(Spend $5 to this account and order this report in the MEMO)

#138818
______________________________________________________

REPORT #2 "The Insider's Guide to Sending Bulk E-mail on the
Internet"

ORDER REPORT #2 FROM:
(Spend $5 to this account and order this report in the MEMO)

#139064
____________________________________________________________

REPORT #3 "The Secrets to Multilevel Marketing on the
Internet"

ORDER REPORT #3 FROM:
(Spend $5 to this account and order this report in the MEMO)

#138054
____________________________________________________________

REPORT #4 "How to become a Millionaire utilizing the Power
of Multilevel Marketing and the Internet"

ORDER REPORT #4 FROM:
(Spend $5 to this account and order this report in the MEMO)

#139060
____________________________________________________________

About 50,000 new people get online every month!


******* TIPS FOR SUCCESS *******

* TREAT THIS AS YOUR BUSINESS! Be prompt, professional, and
follow the directions accurately.

* Send for the four reports IMMEDIATELY so you will have
them when the orders start coming in because:

When you receive a $5 order, you MUST send out the
requested product/report.

* ALWAYS PROVIDE SAME-DAY SERVICE ON THE ORDERS YOU RECEIVE.

* Be patient and persistent with this program. If you follow
the instructions exactly, your results WILL BE SUCCESSFUL!

* ABOVE ALL, HAVE FAITH IN YOURSELF AND KNOW YOU WILL
SUCCEED!



******* YOUR SUCCESS GUIDELINES *******

Follow these guidelines to guarantee your success:

If you don't receive 20 orders for REPORT #1 within two
weeks, continue advertising or sending e-mails until you do.
Then, a couple of weeks later you should receive at least 100 orders for
REPORT#2. If you don't, continue advertising or sending e-mails until you
do.

Once you have received 100 or more orders for REPORT #2, YOU
CAN RELAX, because the system is already working for you, and the cash will
continue to roll in!


THIS IS IMPORTANT TO REMEMBER:

Every time your account number is moved down on the list, you are placed in front of a DIFFERENT report. You can KEEP TRACK of your PROGRESS by watching which report people are ordering from you. If you want to generate more income, send another batch of e-mails or continue placing ads and start the whole process again!

There is no limit to the income you will generate from this
business!

***********************************************
Because of some feedbacks, please allow me to clarify something regarding E-GOLD accounts.You can cash-out your money in your e-gold account.  It will be sent to you by check in a currency that you nominate.  This transaction is called "OutExchange".You can see this when you click on "Access Account" link.  Or you can just go directly to the following link:<https://www.e-gold.com/acct/manager.htm>I understand that e-gold is used in this opportunity because it is international PayPal and X.com are just valid in the US at the moment. Going International means a bigger market.
************************************************

Wishing you the best in all you do! You probably don't believe this will work, but if you don't try it you will never know.  That's the way I feel.  Try it.  You won't be sorry.


















From owner-bio-info@hgmp.mrc.ac.uk  Sun Jun 25 13:48:50 2000
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*********************************************************
To be removed from from further mailings respond to 
this message with "remove" in the subject line.
*********************************************************

Dear Friend,

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---




From owner-bio-info@hgmp.mrc.ac.uk  Tue Jun 27 18:16:11 2000
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From: mike@hotmail.com
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Subject: GUARANTEED way to instantly have EXCELLENT CREDIT!!
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Dear Friend,

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Suite 625
Beverly Hills, CA 90210





---




From owner-bio-info@hgmp.mrc.ac.uk  Thu Jun 29 03:40:17 2000
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From: xanthian@well.com (Kent Paul Dolan)
X-Newsgroups: talk.origins,bionet.info-theory
Subject: Re: debate challenge
Followup-To: talk.origins
Date: 28 Jun 2000 22:36:12 -0400
Organization: Birthright Party "The birthright of humankind is the stars!"
Lines: 42
Message-ID: <zCy65.855$ED.46619@news.wenet.net>
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Reply-To: xanthian@well.com (Kent Paul Dolan)
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Dan Smith  <dan@pioneer-net.com> wrote:
>This is from the Answers in Genesis website:

>"If you are aware of an evolutionary scientist who would be willing to
>participate in a creation vs. evolution debate, contact Jay Horn of AiG
>at 606-727-2222, ext. 402 for information."

>I don't know of any... do you?

Most wouldn't bother wasting their time, since the creationist who will
first provide an agreed, testable, physically realizable, objective method
of falsifying the creationist theory in the tradition of science is also
yet to be found.

>God bless,
>Dan
>
>*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*
>"For since the creation of the world, God's invisible qualities
> - his eternal power and divine nature - have been clearly shown, being 
>understood from what has been made, so that men are without excuse."
> - St. Paul - Letter to the believers in Rome, circa 56 A.D.
>*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*&*
>

xanthian.



               ===== random archival quality quote =====

"The Tuxomatic 2200(TM) with patented Gates-Be-Gone(TM) gets rid of blue
 screens in a flash! It forks! It blits! Look at those fantastic pixels!
 It surfs the web! You could even host an ISP with it!"
                                            -- Matthew Sachs on Slashdot
    -- as quoted by darren@darren.winsper.easynet.co.uk (Darren Winsper)
    --                       http://easyweb.easynet.co.uk/darren.winsper

--
Kent Paul Dolan.
<xanthian@well.com> <xanthian@aztec.asu.edu> <kdolan@ebay.com>




From owner-bio-info@hgmp.mrc.ac.uk  Thu Jun 29 14:43:45 2000
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On 28 Jun 2000, Kent Paul Dolan wrote:

> Dan Smith  <dan@pioneer-net.com> wrote:
> >This is from the Answers in Genesis website:
> 
> >"If you are aware of an evolutionary scientist who would be willing to
> >participate in a creation vs. evolution debate, contact Jay Horn of AiG
> >at 606-727-2222, ext. 402 for information."
> 
> >I don't know of any... do you?
> 
> Most wouldn't bother wasting their time, since the creationist who will
> first provide an agreed, testable, physically realizable, objective method
> of falsifying the creationist theory in the tradition of science is also
> yet to be found.


Just returned from a conference hosted by members of the scientific
community presenting a testable creation model.  This can be found at:

http://www.reasons.org


Several sources by the scientific community can be suggested that show the
dogmatic aspects of naturalistic origins (pysical and organic) and its
analytical short comings, while the design theorists simultaneously are
showing their theory to be more robust with a greater ability to 
incorporate a broader range of the data.

http://www.arn.org


Best regards.


---




From owner-bio-info@hgmp.mrc.ac.uk  Fri Jun 30 00:03:16 2000
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From: xanthian@well.com (Kent Paul Dolan)
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Subject: Re: debate challenge
Date: 30 Jun 2000 00:03:11 +0100
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Peter,

Sorry, the http://www.reasons.org page:

http://www.reasons.org/resources/apologetics/testablecreationsummary.html

under the heading "Testing the Creation Model" _still_ fails to name a single
test whose failure would cause the creationists to admit their model of
reality is false.

In the material above that section are statements so counterfactual as
to boggle the mind trained in science.  It helps, when reading this
material, to remember that evolution _has_ been observed, in historical
time, not just the fossil record, and so requirements that the moth we
have seen change its species dominent color in response to changes in
the color of its resting place, which moth species most certainly did
_not_ have a population of a quadrillion members (roughly a thousand
moths per square foot of the planet, wet or dry), suggests to any
intelligent person that the math results being cited are junk fluffed
up from nonsense to support the creationist position.  The lack of
citations is telling, as well.

If, in contrast, you read Darwin's Origin of Species, numerous times
you will find in the text: if so-and-so is observed to occur, this
theory of mine will be _absolutely_ proved false.  That is a pretty
straightforward challenge to the naysayer: put up or shut up, and if
you can put up, then I'll be the one to shut up.

When creationists can understand, and achieve, the level of courage and
intellectual honesty, and the conviction of the _provable_ truth of
their claims, that the average scientist demonstrates every day in
explaining how exactly to prove his or her pet theory false, meaningful
dialog can begin.  Until then, challenges to "debate" are just
invitations to waste time talking to cowardly morons making a nearly
effort free living on the credulity of the faithful, who will shift
their positions with every loss of ground to experimental findings, and
have already demonstrated that tendency/activity times beyond
counting.

The sun does _not_ revolve around the earth, despite the greatest
faith to the contrary, nor did some untangible creator cause Life,
the Universe, and Everything, despite the greatest faith to the
contrary.  Neither hypothesis survives falsification testing, but
after being burned on the first issue, the faithful no longer have
enough faith to submit the second to falsification testing.

As for the design theorists "incorporating a broader range of the
data", it is to laugh.  All they have done is to take the findings of
science, begrudgingly one by one as the evidence for each became
overwhelming, whip up some completely mind-boggling creationist
explanation that purportedly draws the already known scientific
conclusion, and then say: "see, creationism has predictive power,
too".  It is way easy to predict the past.

Predict something that can have no other explanation than intelligent
design, independent of stuff already known to science, then come and
see me.

The cosmic background radiation was predicted from first principles of
big bang theory, _before_ anyone ever observed it, and _then_ it was
observed, in a way any interested (and well funded) person could
replicate.  Do that prediction of new, unknown, and reproducable
research results from a creationist basis, and then perhaps educated
people will stop laughing at creationists.

Until then, earplugs are the recommended stopgap solution.

xanthian.

Date: Thu, 29 Jun 2000 09:43:34 -0400
From: Peter Leeds <leedsusa@helix.nih.gov>
To: Kent Paul Dolan <xanthian@well.com>
cc: bio-info@hgmp.mrc.ac.uk
Subject: Re: debate challenge

On 28 Jun 2000, Kent Paul Dolan wrote:

> Dan Smith  <dan@pioneer-net.com> wrote:
> >This is from the Answers in Genesis website:
> 
> >"If you are aware of an evolutionary scientist who would be willing to
> >participate in a creation vs. evolution debate, contact Jay Horn of AiG
> >at 606-727-2222, ext. 402 for information."
> 
> >I don't know of any... do you?
> 
> Most wouldn't bother wasting their time, since the creationist who will
> first provide an agreed, testable, physically realizable, objective method
> of falsifying the creationist theory in the tradition of science is also
> yet to be found.


Just returned from a conference hosted by members of the scientific
community presenting a testable creation model.  This can be found at:

http://www.reasons.org

Several sources by the scientific community can be suggested that show the
dogmatic aspects of naturalistic origins (pysical and organic) and its
analytical short comings, while the design theorists simultaneously are
showing their theory to be more robust with a greater ability to 
incorporate a broader range of the data.

http://www.arn.org


Best regards.




---




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