From owner-software@net.bio.net Fri May 01 23:00:00 1998 Path: biosci!bcm.tmc.edu!news.msfc.nasa.gov!europa.clark.net!208.134.241.18!newsfeed.internetmci.com!204.186.110.126!ptdnetP!newsgate.ptd.net!news.cc.ukans.edu!not-for-mail From: PGegen@UKans.nospam.edu (Dr. Peter Gegenheimer) Newsgroups: alt.binaries.w-software,alt.comp.software,alt.comp.software.financial,alt.comp.software.financial.peachtree,alt.comp.software.tools,alt.geo-software,alt.med.software,bionet.software,bionet.software.acedb,ab.software.developers Subject: Re: S/N Partition Magic needed Date: 2 May 1998 00:23:06 GMT Organization: Univ. Kansas (Biochemistry) Lines: 43 Message-ID: <7opiGDf98QgB-pn2-pfdfdv1Vdndd@rnaworld.bio.ukans.edu> References: <353EDEEE.2814A17E@idirect.com> <6i84ii$gt8@chile.earthlink.net> <6i9ecg$ppv$1@news3.isdnet.net> Reply-To: PGegen@UKans.nospam.edu NNTP-Posting-Host: rnaworld.bio.ukans.edu Mime-Version: 1.0 Content-Type: text/plain; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable X-Newsreader: ProNews/2 Version 1.00 Xref: biosci bionet.software:20975 bionet.software.acedb:1737 On Thu, 30 Apr 1998 08:59:22, "Myriam Pinon" wrote: > Hi, > I have an illegal copy of Partiton Magic 3 and I never had the installation > code. Can anyone help me too? > M. ^^ I assume this is what you think the following message is _really_ saying. Otherwise....!#? > Farrukh Imtiaz, M.D. a =E9crit dans le message > <6i84ii$gt8@chile.earthlink.net>... > >I have a legal copy of Partition Magic 3.0 CD. I have lost the CDs > >installation code. Can anyone help me break the code or supply me with > >one Yes, I'll help you. I have a copy of Partition Magic which has proved worth its weight in gold. For you gold-diggers, I'll send your names & addresses to PowerQuest Corp., so they can contact you about getting legal copies. (If your copy were legal, you would already have called PowerQuest with your name and serial # and they would have helped you.) Really! o------------------------------------------------------------------- --o | Dr. Peter Gegenheimer | Vox: 785-864-3939 FAX: 785-864-5321 | | Departments of Biochemistry | PGegen@UKans.nospam.edu | | and of Botany | http://RNAworld.Bio.UKans.edu/ | | | | | University of Kansas | | | 2045 Haworth Hall | "The sleep of reason produces | | Lawrence KS 66045-2106 | monsters." Goya | o_____________________________|_____________________________________ __o From owner-software@net.bio.net Sat May 02 23:00:00 1998 Newsgroups: bionet.software Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!ais.net!uunet!in4.uu.net!world!oravaxcm From: oravaxcm@world.std.com (Charles A Miller) Subject: What gel/image software isthere for the PC? Message-ID: Organization: The World Public Access UNIX, Brookline, MA X-Newsreader: TIN [version 1.2 PL2] Date: Sun, 3 May 1998 05:42:55 GMT Lines: 13 What kind of software is there (for download) that can analyze gels? I'm looking for PC preferably (Windows). I remember hearing about something that the NIH had but can't find any information online. Thanks, Chuck oravaxcm@world.std.com From owner-software@net.bio.net Sat May 02 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!worldnet.att.net!newsadm From: "Dr. Al Link" Newsgroups: bionet.software Subject: NOVELL NETWARE FOR SALE OR TRADE Date: Sat, 2 May 1998 19:20:02 -0400 Organization: AT&T WorldNet Services Lines: 56 Message-ID: <6igd8c$a1v@bgtnsc03.worldnet.att.net> NNTP-Posting-Host: 12.70.47.248 Mime-Version: 1.0 Content-Type: multipart/alternative; boundary="----=_NextPart_000_0062_01BD75FF.4E6B3140" X-Newsreader: Microsoft Outlook Express 4.72.2106.4 X-MimeOLE: Produced By Microsoft MimeOLE V4.72.2106.4 This is a multi-part message in MIME format. ------=_NextPart_000_0062_01BD75FF.4E6B3140 Content-Type: text/plain; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable In factory sealed box: Novell Netware Version 4.01 with 50 user license. = All updates to this product are currently available from Novell's web site. Will sell outright to interested party or trade for electronic equipment = including late model amateur radio equipment. If interested please email al.link@worldnet.att.net. Thanks for reading, AL ------=_NextPart_000_0062_01BD75FF.4E6B3140 Content-Type: text/html; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable

In factory sealed box: Novell Netware Version 4.01 with 50 user = license. All=20 updates to

this product are currently available from Novell's web site.

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------=_NextPart_000_0062_01BD75FF.4E6B3140-- From owner-software@net.bio.net Sat May 02 23:00:00 1998 Path: biosci!rutgers!rockyd.rockefeller.edu!newsfeed.nyu.edu!newsxfer3.itd.umich.edu!newsxfer.itd.umich.edu!uunet!in3.uu.net!venus.hkstar.com!not-for-mail From: "Andy" Newsgroups: alt.collecting.stamps.software,alt.comp.software,alt.comp.software.easter-eggs,alt.comp.software.tools,alt.fan.dean-stark.software,alt.fan.dean-stark.software.tester,alt.fan.soft-targets,alt.med.software,bionet.software,bionet.software.acedb,bio Subject: Photoshop 4.0 Serial Number Wanted. Date: 3 May 1998 06:13:56 GMT Organization: ¤½¥q¦WºÙ¥¼ª¾ Lines: 8 Message-ID: <01bd75f6$4ef18e60$70f352ca@default> NNTP-Posting-Host: 202.82.243.112 X-Newsreader: Microsoft Internet News 4.70.1161 Xref: biosci bionet.software:20979 bionet.software.acedb:1739 I cannot get my correct serial number of photoshop 4.0 from my package. May someone kindly to give me the serial number of photoshop 4.0 so that I can start my work. My E-mail address is JP838688@hkstar.com Thank you for your kind attention and help. From owner-software@net.bio.net Sun May 03 23:00:00 1998 Path: biosci!mti-n.uni-jena.de!ugau From: ugau@mti-n.uni-jena.de ("U. Gausmann") Newsgroups: bionet.software Subject: Help: Detection of hairpins/T7 termination signals Date: 4 May 1998 00:58:46 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 19 Sender: daemon@net.bio.net Distribution: world Message-ID: <354DF347.C6258EA7@mti-n.uni-jena.de> NNTP-Posting-Host: net.bio.net Hallo, does anybody know how to detect secondary structures in RNA? I 'd like to know if my specific sequence (mammalian) contains termination signals for T7 polymerase. I think hairpin structures result in termination of transcription - am I right? Thank you for help, Ulrike -- Ulrike Gausmann | D-07743 Jena Institut fuer Anatomie | Germany Anatomie II | Tel +49 (0)3641 938553 Teichgraben 7 | email ugau@mti-n.uni-jena.de From owner-software@net.bio.net Sun May 03 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!newsxfer3.itd.umich.edu!oleane!pasteur.fr!univ-tln.fr!news.univ-aix.fr!eerie.fr!cnusc.fr!ciril.fr!u-strasbg.fr!news From: pingouin@crystal.u-strasbg.fr (Francois Jeanmougin) Newsgroups: bionet.software Subject: Re: What happened to the EBI website? Date: 4 May 1998 14:44:38 GMT Organization: CRC - Universite Louis Pasteur - Strasbourg France Lines: 21 Message-ID: <6ikk8m$jhf@news.u-strasbg.fr> References: <354dd01f.2930539@netnews.upenn.edu> Reply-To: jeanmougin@igbmc.u-strasbg.fr NNTP-Posting-Host: crystal.u-strasbg.fr Mime-Version: 1.0 Content-Type: text/plain; charset=iso-8859-1 Content-Transfer-Encoding: 8bit X-Newsreader: knews 0.9.8 In article <354dd01f.2930539@netnews.upenn.edu>, alwang@doubt.com (Al Wang) writes: > > Does anyone know what's the current address for the European > Bioinformatics Institute website? The old server appears to be gone. > > I'm trying to get a copy of clustalw 1.7, so if anyone knows where > else this is archived, I'd appreciate it. Latest versions of both ClustalW and ClustalX and documentations are available from : ftp://ftp-igbmc.u-strasbg.fr/pub/ Please let me know if it works well at your site. François. P.S.: Anyway, ftp.ebi.ac.uk seems to be off... -- François Jeanmougin | groupe de bioinformatique / bioinformatics groupe tel:(+33) 3 88 65 32 71 | IGBMC BP 163 67404 Illkirch France From owner-software@net.bio.net Sun May 03 23:00:00 1998 Path: biosci!news.Stanford.EDU!Cabal.CESspool!bofh.vszbr.cz!serra.unipi.it!newsserver.cilea.it!sirio.cineca.it!gopher From: lcs@>SPAMSUCKS Reply-To: lcs@>SPAMSUCKS References: <353E0385.175F5078@neuropa.com> Reply-To: letondal@pasteur.fr (Catherine Letondal) NNTP-Posting-Host: nefertiti.pasteur.fr X-Newsreader: mxrn 6.18-31 In article <353E0385.175F5078@neuropa.com>, christine@neuropa.com (Christine Haworth) writes: >Could anyone suggest where to look for a good all-round MAC software >package for Molecular Biology? > >Christine >christine@neuropa.com > > You may also take a look at: ftp://ftp.pasteur.fr/pub/GenSoft/Macintosh/ Regards, -- Catherine LETONDAL letondal@pasteur.fr Tel: +33 (1) 40 61 31 91 Institut Pasteur Service d'Informatique Scientifique Fax: +33 (1) 40 61 30 80 28 rue du Docteur Roux 75724 Paris CEDEX 15 - FRANCE From owner-software@net.bio.net Sun May 03 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!newshub.northeast.verio.net!nntp.upenn.edu!not-for-mail From: alwang@doubt.com (Al Wang) Newsgroups: bionet.software Subject: What happened to the EBI website? Date: Mon, 04 May 1998 14:28:23 GMT Organization: University of Pennsylvania Lines: 13 Message-ID: <354dd01f.2930539@netnews.upenn.edu> NNTP-Posting-Host: nic-22-174.resnet.upenn.edu Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Newsreader: Forte Agent 1.01/32.397 Does anyone know what's the current address for the European Bioinformatics Institute website? The old server appears to be gone. I'm trying to get a copy of clustalw 1.7, so if anyone knows where else this is archived, I'd appreciate it. Al Al Wang http:www.seas.upenn.edu/~alwang remove NOSPAM to reply From owner-software@net.bio.net Sun May 03 23:00:00 1998 Path: biosci!NBRF.GEORGETOWN.EDU!MARZEC From: MARZEC@NBRF.GEORGETOWN.EDU ("Christopher R. Marzec") Newsgroups: bionet.software Subject: PIRALN Protein Sequence Alignment Database available Date: 4 May 1998 13:38:28 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 58 Sender: daemon@net.bio.net Distribution: world Message-ID: <01IWN4NTCRDE934UD1@NBRF.Georgetown.Edu> NNTP-Posting-Host: net.bio.net The PIRALN Protein Sequence Alignment Database is a database of protein alignments produced by L.-S. Yeh, G.Y. Srinivasarao and C.R. Marzec of NBRF/PIR. It is derived from sequences in the PIR-International Protein Sequence Database. Alignment entries are one of three types: sequences from one family which are less than 55% different from each other, sequences representing various families within a superfamily or sequence segments corresponding to some homology domain found in multiple proteins. Release 19.0, March 1998, of the PIRALN database contains a total of 3468 alignments, with 40,773 members. There are 2106 family, 1012 superfamily and 350 homology domain alignments. These alignments are curated and contain only representative sequences; alignment entries are not necessarily complete. The information contained in a PIRALN entry is divided into twelve sections. The sections are listed below in the order in which they occur in the entry. Header - entry beginning and identifier Title - title of the alignment Alternate names - alternate names for the group Date - creation, sequence revision and text revision dates Members - PIR entry codes of protein sequences used in the alignment Members Titles - PIR titles of sequences used in the alignment Other members - other members of the group not represented on the alignment Comment - comment lines Keywords - keywords present in all the members of the alignemnt Other keywords - keywords not common to every member of the alignment Alignment - alignment of sequences Matrix - matrix of percent differences The Alignment database has been integrated with the ATLAS multidatabase information retrieval system, developed at PIR, which provides full access to the data. The Alignment database can be accessed via the WWW at www-nbrf.georgetown.edu/pir and the "Atlas of Protein and Genomic Sequences" CD-ROM available from the PIR-International centers in the US, Europe, and Japan. For anonymous FTP download go to the PIR FTP site at address NBRF.Georgetown.edu directory [ANONYMOUS.PIR.ALIGNMENT]. Techical questions regarding PIRALN should be directed to Christopher Marzec and other questions to Lai-Su Yeh or Geetha Srinivasarao at E-mail: marzec, yeh or geetha@nbrf.georgetown.edu Regards, Christopher R. Marzec Database Manager PIR-International Protein Sequence Database National Biomedical Research Foundation Washington, DC 20007 MARZEC@NBRF.Georgetown.Edu voice: (202) 687-2121 fax: (202) 687-1662 From owner-software@net.bio.net Sun May 03 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!news-peer.gip.net!news.gsl.net!gip.net!newsfeed.nacamar.de!nntp.news.xara.net!xara.net!server6.netnews.ja.net!server4.netnews.ja.net!qmw!not-for-mail From: Dave Curtis Newsgroups: bionet.software Subject: Re: What happened to the EBI website? Date: Mon, 04 May 1998 21:16:09 +0100 Organization: Queen Mary & Westfield College, London, UK Lines: 10 Message-ID: <354E2209.A7B58CEC@hgmp.mrc.ac.uk> References: <354dd01f.2930539@netnews.upenn.edu> <6ikk8m$jhf@news.u-strasbg.fr> NNTP-Posting-Host: dialup-port16.qmw.ac.uk Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.03 [en] (Win95; I) > P.S.: Anyway, ftp.ebi.ac.uk seems to be off... Working OK now, I think. Dave Curtis Tel : +44-171-377-7729 Dept Adult Psychiatry Fax : +44-171-377-7316 3rd Floor Outpatient Building Email : dcurtis@hgmp.mrc.ac.uk Royal London Hospital WWW : http://www.gene.ucl.ac.uk/~dcurtis/ Whitechapel, London E1 1BB, UK From owner-software@net.bio.net Sun May 03 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!wtn-news-feed2.bbnplanet.com!news.bbnplanet.com!icet.net.nih.gov!news From: Jonathan Epstein Newsgroups: bionet.software Subject: publication-quality protein alignments Date: Mon, 04 May 1998 16:09:47 -0400 Organization: National Institutes of Health Lines: 12 Message-ID: <354E208A.AF43F945@nih.gov> NNTP-Posting-Host: 128.231.155.56 Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.04 [en] (Win95; I) I am looking for some software to produce attractive proteins alignments suitable for publication. It possible, this software should run on a Macintosh or a Web-based platform. I also looking for software to produce publication-quality phylogenetic trees. Thanks in advance, - Jonathan From owner-software@net.bio.net Sun May 03 23:00:00 1998 Path: biosci!bloom-beacon.mit.edu!news.kodak.com!news-nysernet-16.sprintlink.net!206.229.87.26!news-east.sprintlink.net!news-peer.sprintlink.net!news.sprintlink.net!europa.clark.net!194.162.162.196!newsfeed.nacamar.de!news.fh-hannover.de!news.tu-bs.de!not-for-mail From: "Michael Lodders" Newsgroups: bionet.software,braunschweig.kaufrausch,de.comm.software.misc,hannover.fundgrube,tubs.software,wolfsburg.kaufrausch,wolfsburg.software Subject: V: MS Visual C++ Prof. und MS Visual Basic Prof. 4.0 Date: Mon, 4 May 1998 18:06:23 +0200 Organization: TU Braunschweig, Germany Lines: 15 Distribution: world Message-ID: <6ikp3c$qso$1@rzcomm2.rz.tu-bs.de> NNTP-Posting-Host: ppp352.ts.rz.tu-bs.de X-Newsreader: Microsoft Outlook Express 4.71.1712.3 X-MimeOLE: Produced By Microsoft MimeOLE V4.71.1712.3 Hallo! Habe mangels Bedarf folgende Software abzugeben: Microsoft Visual Basic Professional 4.0, deusch, original CD-Rom und Microsoft Visual C++ Professional Intel 4.0, englisch, original CD-Rom Preis VB GRUß Michael From owner-software@net.bio.net Sun May 03 23:00:00 1998 Path: biosci!UMAIL.UMD.EDU!jg121 From: jg121@UMAIL.UMD.EDU ("Joel Gagliardi") Newsgroups: bionet.software Subject: Re: Simulation w/ Metal ion Date: 4 May 1998 06:32:50 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 38 Sender: daemon@net.bio.net Distribution: world Message-ID: <199805041330.JAA03560@umailsrv0.umd.edu> NNTP-Posting-Host: net.bio.net We use GEOCHEM-PC to simulate the binding of heavy metals to organic and inoranic ligands. In fact, we devised several types of microbiological media to simulate the free metal availability based on the compnents in the medium. You could do the reverse in a closed system and determine the amount of metal binding to certain ligands based on what you input as ligand concentration and heavy metal concentration and form. I could obtain a copy for you from Dr. Rufus Chaney at the USDA or Dr. David Parker, who developed the original program. Out of curiosity, what other programs are you using? I can also send you references showing how bioavailability of metal rather than concentration is the factor to consider in when addressing toxicity. Joel Gagliardi jg121@umail.umd.edu ---------- > From: Tae-Joon Kwon > To: bio-soft@net.bio.net > Subject: Simulation w/ Metal ion > Date: Monday, May 04, 1998 5:27 AM > > Hello, > > I'd like to simulate the bio-adsorption of heavy metal. > > Almost all simulation programs, not only freewares but commercial ones, > can be shown the binding of small molecules (ligand), I think. > > But, how about heavy metal rather than ligand? > Can I calculate the binding energy of Metal with biomolecule? > > Notice the techniques or the program tools, Anything OK... > > Thanks. > > linusben@biopia.snu.ac.kr From owner-software@net.bio.net Sun May 03 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!chicago-news-feed2.bbnplanet.com!news.bbnplanet.com!news.itis.com!not-for-mail From: Petr Kuzmic Newsgroups: bionet.software Subject: Re: VisualBasic or JavaScript for bionet users Date: Mon, 04 May 1998 10:20:42 -0500 Organization: BioKin Consulting Lines: 26 Message-ID: <354DDCC5.430B5C35@biokin.com> References: <6iau6o$4le$1@supernews.com> <6ikkr6$rj6@sjx-ixn10.ix.netcom.com> NNTP-Posting-Host: a5-48.itis.com Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.04 (Macintosh; I; PPC) Joseph James wrote: > > I would recommend using Visual Basic for the front-end user interface (for > rapid development) and then encapsulating your mathematical calculations and > other application-specific algorithms in DLLs or OCX controls developed with > C or C++ Add to the list of possibilities making your DLL's (or "shared libraries" in the Macintosh OS / Unix terminology) in FORTRAN. See http://www.netlib.org/ for a vast repository of mathematical software, created by several generations of numerical analysts working at NASA, Los Alamos, Sandia, Lawrence Livermore, and Oak Ridge national laboratories. Many algorithms deposited in Netlib are documented in peer-reviewed journal articles (e.g., "Trans. Math. Software"), so you know everything is working the way it should. If you don't have a FORTRAN compiler, just use the public-domain "f2c" translator to translate everythign into C. -- Petr _____________________________________________________________ Petr Kuzmic Ph.D. * BioKin Ltd. * Madison, WI 53708-8336, USA pkuzmic@biokin.com * http://www.biokin.com * 608.256.1269 fax From owner-software@net.bio.net Sun May 03 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!ix.netcom.com!news From: "Joseph James" Newsgroups: bionet.software Subject: Re: VisualBasic or JavaScript for bionet users Date: Mon, 4 May 1998 10:54:59 -0400 Organization: Netcom Lines: 34 Message-ID: <6ikkr6$rj6@sjx-ixn10.ix.netcom.com> References: <6iau6o$4le$1@supernews.com> NNTP-Posting-Host: nwk-nj16-14.ix.netcom.com X-NETCOM-Date: Mon May 04 7:54:30 AM PDT 1998 X-Newsreader: Microsoft Outlook Express 4.71.1712.3 X-MimeOLE: Produced By Microsoft MimeOLE V4.71.1712.3 I would recommend using Visual Basic for the front-end user interface (for rapid development) and then encapsulating your mathematical calculations and other application-specific algorithms in DLLs or OCX controls developed with C or C++ (or even with Visual Basic, if you are willing to sacrifice performance and portability) which can be invoked from the Visual Basic shell. By encapsulating the programmatic essence of your application in well-designed C or C++ code, you will enjoy the benefits of extreme cross-platform portability with minimal source code adjustment, the rapid execution speed of optimized and compiled C or C++ code, and the rendering of your source code in an object-oriented general purpose programming language that enjoys universal acceptance and which has become a de-facto standard for scientific software engineering. Joseph James Please visit http://www.angelfire.com/biz/qtechsoftware to find out more about high quality, cost-effective scientific software and technical documentation solutions for small to medium-sized businesses JMonahan wrote in message <6iau6o$4le$1@supernews.com>... >I am in the process of writing a software application for genomics/bionet >users. I will be embedding a scripting interface and am trying to decide if >I should go with a VisualBasic or JavaScript dialog. On one hand Basic is >well known to even Microsoft Office users as a scripting language. It is >however crude when used with complex functions, flow control issues etc.. >On the other hand JavaScript has a cleaner type of flow control and is "easy >to read" if that makes any sense. The problem is it is new. The application >will not be done for about 2 years so I am trying to decide what the status >of scripting interfaces will be at that time. Would welcome comments, if >need be to monahan@dnai.com From owner-software@net.bio.net Sun May 03 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!news.bbnplanet.com!xfer.kren.ne.kr!xfer.kren.nm.kr!news.kren.ne.kr!not-for-mail From: Tae-Joon Kwon Newsgroups: bionet.software Subject: Simulation w/ Metal ion Date: Mon, 04 May 1998 18:27:06 +0900 Organization: Seoul National University, Republic of Korea Lines: 15 Message-ID: <354D89EA.8468BA81@biopia.snu.ac.kr> Reply-To: linusben@biopia.snu.ac.kr NNTP-Posting-Host: 147.46.30.166 Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.04 [en] (Win95; I) Hello, I'd like to simulate the bio-adsorption of heavy metal. Almost all simulation programs, not only freewares but commercial ones, can be shown the binding of small molecules (ligand), I think. But, how about heavy metal rather than ligand? Can I calculate the binding energy of Metal with biomolecule? Notice the techniques or the program tools, Anything OK... Thanks. linusben@biopia.snu.ac.kr From owner-software@net.bio.net Sun May 03 23:00:00 1998 Newsgroups: bionet.software Path: biosci!agate!arclight.uoregon.edu!news-out.internetmci.com!newsfeed.internetmci.com!128.230.129.106!news.maxwell.syr.edu!news-ge.switch.ch!news-zh.switch.ch!news.belnet.be!hnets.uia.ac.be!rhubner From: rhubner@gins.uia.ac.be (Roland Hübner) Subject: Re: hairpins/T7 termination... X-Nntp-Posting-Host: macgens6.uia.ac.be Message-ID: Sender: news@uia.ua.ac.be (News database) Organization: UIA X-Newsreader: MT-NewsWatcher 2.4.4 Date: Mon, 4 May 1998 15:56:47 GMT Lines: 8 Hi there, to analyze your seqs for such structures try the GCG package (aka Wisconsin prgs.); it is available in Europe on EMBL node servers or your University might have a local license... Have fun, Roland From owner-software@net.bio.net Sun May 03 23:00:00 1998 Path: biosci!bloom-beacon.mit.edu!news.kodak.com!news-nysernet-16.sprintlink.net!news.sprintlink.net!128.122.253.90!newsfeed.nyu.edu!news.idt.net!newsfeed.internetmci.com!207.217.77.43!newsfeed1.earthlink.net!nntp.earthlink.net!usenet From: "Farrukh Imtiaz, M.D." Newsgroups: alt.binaries.w-software,alt.comp.software,alt.comp.software.financial,alt.comp.software.financial.peachtree,alt.comp.software.tools,alt.geo-software,alt.med.software,bionet.software,bionet.software.acedb,ab.software.developers Subject: Re: S/N Partition Magic needed Date: Mon, 4 May 1998 07:01:53 -0400 Organization: EarthLink Network, Inc. Lines: 52 Message-ID: <6ik78e$8kl@suriname.earthlink.net> References: <353EDEEE.2814A17E@idirect.com> <6i84ii$gt8@chile.earthlink.net> <6i9ecg$ppv$1@news3.isdnet.net> <7opiGDf98QgB-pn2-pfdfdv1Vdndd@rnaworld.bio.ukans.edu> NNTP-Posting-Host: 153.36.12.254 X-Newsreader: Microsoft Outlook Express 4.72.2106.4 X-MimeOLE: Produced By Microsoft MimeOLE V4.72.2106.4 Xref: biosci bionet.software:20984 bionet.software.acedb:1740 Yeah right. Tell them I got the code PM302UK-105693. I still own a legal copy. Software subscribers are at peril if they loose their serials and newsgroups help them faster and better than the software manufacturer and with no questions asked or money exchanged. Now you can dig into your gold. Dr. Peter Gegenheimer wrote in message <7opiGDf98QgB-pn2-pfdfdv1Vdndd@rnaworld.bio.ukans.edu>... On Thu, 30 Apr 1998 08:59:22, "Myriam Pinon" wrote: > Hi, > I have an illegal copy of Partiton Magic 3 and I never had the installation > code. Can anyone help me too? > M. ^^ I assume this is what you think the following message is _really_ saying. Otherwise....!#? > Farrukh Imtiaz, M.D. a écrit dans le message > <6i84ii$gt8@chile.earthlink.net>... > >I have a legal copy of Partition Magic 3.0 CD. I have lost the CDs > >installation code. Can anyone help me break the code or supply me with > >one Yes, I'll help you. I have a copy of Partition Magic which has proved worth its weight in gold. For you gold-diggers, I'll send your names & addresses to PowerQuest Corp., so they can contact you about getting legal copies. (If your copy were legal, you would already have called PowerQuest with your name and serial # and they would have helped you.) Really! o------------------------------------------------------------------- --o | Dr. Peter Gegenheimer | Vox: 785-864-3939 FAX: 785-864-5321 | | Departments of Biochemistry | PGegen@UKans.nospam.edu | | and of Botany | http://RNAworld.Bio.UKans.edu/ | | | | | University of Kansas | | | 2045 Haworth Hall | "The sleep of reason produces | | Lawrence KS 66045-2106 | monsters." Goya | o_____________________________|_____________________________________ __o From owner-software@net.bio.net Mon May 04 23:00:00 1998 Path: biosci!agate!howland.erols.net!newsfeed.nacamar.de!nntp.news.xara.net!xara.net!server5.netnews.ja.net!server3.netnews.ja.net!news.icnet!m.mitchell From: m.mitchell@icrf.icnet.uk (Mike Mitchell) Newsgroups: bionet.software Subject: Re: What happened to the EBI website? Date: Tue, 05 May 1998 11:24:09 +0100 Organization: Imperial Cancer Research Fund Lines: 9 Message-ID: References: <354dd01f.2930539@netnews.upenn.edu> <6ikk8m$jhf@news.u-strasbg.fr> <354E2209.A7B58CEC@hgmp.mrc.ac.uk> <6imgi1$l52@news.u-strasbg.fr> NNTP-Posting-Host: morpheus.lif.icnet.uk Mime-Version: 1.0 Content-Type: text/plain; charset=ISO-8859-1 Content-Transfer-Encoding: 8bit X-Newsreader: Yet Another NewsWatcher 2.4.0 Apparantly they have been having problems with the ftp server. However, it is responding (to me) at present (5th May 11:23 BST), as is the WWW server... -- Michael Mitchell "Smoke me a kipper, User Support I'll be back for breakfast." Molecular Biology Software Ace Rimmer, Test Pilot +44 (0)171 269 3115 BBC-TV Red Dwarf ENFJ From owner-software@net.bio.net Mon May 04 23:00:00 1998 Message-ID: <354ED64D.72EC5925@evolution.bmc.uu.se> Date: Tue, 05 May 1998 09:05:17 +0000 From: Maido Remm Organization: Estonian Biocentre X-Mailer: Mozilla 4.04 [en] (X11; I; Linux 2.0.32 i586) MIME-Version: 1.0 Newsgroups: bionet.software Subject: Re: Help: Detection of hairpins/T7 termination signals References: <354DF347.C6258EA7@mti-n.uni-jena.de> Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit NNTP-Posting-Host: leo.bmc.uu.se Lines: 15 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!news.bbnplanet.com!newsfeed.direct.ca!newshub.northeast.verio.net!news-pen-3.sprintlink.net!news-pen-1.sprintlink.net!news.sprintlink.net!newsfeed1.swip.net!fci-se!fci!newsfeed.sunet.se!news01.sunet.se!news99.sunet.se!newsfeed.uu.se!leo.bmc.uu.se U. Gausmann wrote: > > Hallo, > > does anybody know how to detect secondary structures in RNA? > I 'd like to know if my specific sequence (mammalian) contains > termination signals for T7 polymerase. > I think hairpin structures result in termination of transcription > - am I right? > Have you tried mfold? http://www.ibc.wustl.edu/~zuker/rna/form1.cgi Maido Remm, ESTONIAN BIOCENTER From owner-software@net.bio.net Mon May 04 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!news.bbnplanet.com!newsfeed.wli.net!news-peer-west.sprintlink.net!news-peer.sprintlink.net!news.sprintlink.net!newsfeed.nacamar.de!univ-lyon1.fr!unice.fr!cnusc.fr!ciril.fr!u-strasbg.fr!news From: pingouin@crystal.u-strasbg.fr (Francois Jeanmougin) Newsgroups: bionet.software Subject: Re: What happened to the EBI website? Date: 5 May 1998 07:53:37 GMT Organization: CRC - Universite Louis Pasteur - Strasbourg France Lines: 45 Message-ID: <6imgi1$l52@news.u-strasbg.fr> References: <354dd01f.2930539@netnews.upenn.edu> <6ikk8m$jhf@news.u-strasbg.fr> <354E2209.A7B58CEC@hgmp.mrc.ac.uk> Reply-To: jeanmougin@igbmc.u-strasbg.fr NNTP-Posting-Host: crystal.u-strasbg.fr Mime-Version: 1.0 Content-Type: text/plain; charset=iso-8859-1 Content-Transfer-Encoding: 8bit X-Newsreader: knews 0.9.8 In article <354E2209.A7B58CEC@hgmp.mrc.ac.uk>, Dave Curtis writes: >> P.S.: Anyway, ftp.ebi.ac.uk seems to be off... > > Working OK now, I think. The www site works well but, for ftp.ebi.ac.uk : [pingouin@crystal pingouin]$ /usr/sbin/traceroute ftp.ebi.ac.uk traceroute to gin.ebi.ac.uk (193.62.196.129), 30 hops max, 40 byte packets 1 api-cisco (130.79.79.254) 2.967 ms 1.348 ms 1.932 ms 2 ensps-cisco (130.79.23.42) 2.106 ms 2.069 ms 3.075 ms 3 chimie-cisco (130.79.23.133) 2.785 ms 3.623 ms 2.754 ms 4 crc1-cisco (130.79.23.6) 3.670 ms 3.783 ms 3.885 ms 5 ulp-strasbourg.alsater.ft.net (193.54.208.1) 4.266 ms 4.659 ms 4.542 ms 6 strasbourg1.alsater.ft.net (193.54.139.9) 61.947 ms 53.741 ms 64.201 ms 7 strasbourg.renater.ft.net (193.54.139.50) 54.018 ms 42.719 ms 27.375 ms 8 stamand2.renater.ft.net (195.220.180.77) 92.945 ms 47.596 ms 54.289 ms 9 rbs1.renater.ft.net (192.93.43.46) 60.392 ms 66.497 ms 69.601 ms 10 renater.FR.ten-34.net (193.203.228.5) 155.039 ms 278.108 ms 194.998 ms 11 FR.uk.ten-34.net (193.203.228.2) 108.290 ms 75.866 ms 84.659 ms 12 ten34-gw.ja.net (193.203.228.10) 53.979 ms 93.508 ms 53.470 ms 13 external-gw.ja.net (128.86.1.40) 46.212 ms 52.429 ms 33.426 ms 14 london-core.ja.net (146.97.251.58) 41.782 ms 34.465 ms 84.644 ms 15 smds-gw.cam.ja.net (146.97.251.54) 143.320 ms 117.255 ms 137.742 ms 16 * gw.hinx.ja.net (193.60.0.6) 125.706 ms 67.325 ms 17 194.66.91.18 (194.66.91.18) 52.249 ms 53.797 ms 66.430 ms 18 * * * 19 * * * It could be a routing problem, but I am unable to connect to this machine. Ooooops, trying to connect to http://www.ebi.ac.uk/ returns me a "Document contains no data"... Ouch. Is there any EBI admin around here??? Did you play with firewalls recently??? François. -- François Jeanmougin | groupe de bioinformatique / bioinformatics groupe tel:(+33) 3 88 65 32 71 | IGBMC BP 163 67404 Illkirch France From owner-software@net.bio.net Mon May 04 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!europa.clark.net!194.162.162.196!newsfeed.nacamar.de!nntp.news.xara.net!xara.net!news-lond.gip.net!news.gsl.net!gip.net!bignews.mediaways.net!bignews.telemedia.de!not-for-mail From: Markus Bindatsch Newsgroups: bionet.software Subject: Is there any good plasmid drawing software?? Date: Tue, 05 May 1998 23:15:02 +0200 Organization: Telemedia News Server Lines: 7 Message-ID: <354F8153.2837@cww.de> Reply-To: markus.bindatsch@cww.de NNTP-Posting-Host: demdwu36.bertelsmann.de Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 3.01 [de] (Win95; I) X-NNTP-Posting-Host: 195.71.100.98 X-NNTP-Posting-Host: 193.189.224.212 Hello, everyone. I would like to know, if there is any good (and inexpensive) software to draw plasmids. Thanks in advance Markus From owner-software@net.bio.net Mon May 04 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!baron.netcom.net.uk!netcom.net.uk!server3.netnews.ja.net!is.bbsrc.ac.uk!news From: michael.baron@deletethis.bbsrc.ac.uk Newsgroups: bionet.software Subject: Re: publication-quality protein alignments Date: Tue, 05 May 1998 11:56:46 +0100 Organization: BBSRC Biotechnology and Biological Sciences Research Council Lines: 30 Message-ID: <354EF06D.2412@deletethis.bbsrc.ac.uk> References: <354E208A.AF43F945@nih.gov> NNTP-Posting-Host: pc0288.avri.bbsrc.ac.uk Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 3.0 (Win95; I) To: Jonathan Epstein Jonathan Epstein wrote: > > I am looking for some software to produce attractive proteins alignments > suitable for publication. It possible, this software should run on a > Macintosh or a Web-based platform. May I suggest MacBoxShade, which is designed to do just this. Output is in EPSF, PS, PICT, RTF and ASCII formats, lots of options, Mac-type user interface, complete control of colours used. Input is GCG/ClustalW MSF file format. I think it is pretty cool, but then I would, as I am the author ;-) ftp://ulrec3.unil.ch/pub/boxshade/MacBoxshade I have also posted it to Don Gilbert's iubio archive in the states, but I haven't checked where exactly it is filed. If you have problems getting hold of it, drop me a line. Michael +*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+*+ Michael D. Baron Ph.D. (michael.baron@deletethis.bbsrc.ac.uk) Senior Research Scientist Institute for Animal Health Ash Road, Pirbright, Surrey, U.K. From owner-software@net.bio.net Mon May 04 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!news-peer.sprintlink.net!news.sprintlink.net!newsfeed.nacamar.de!nntp.news.xara.net!xara.net!server5.netnews.ja.net!server3.netnews.ja.net!is.bbsrc.ac.uk!news From: michael.baron@deletethis.bbsrc.ac.uk Newsgroups: bionet.software Subject: Re: publication-quality protein alignments Date: Tue, 05 May 1998 14:56:35 +0100 Organization: BBSRC Biotechnology and Biological Sciences Research Council Lines: 18 Message-ID: <354F1A93.5774@deletethis.bbsrc.ac.uk> References: <354E208A.AF43F945@nih.gov> <354EF06D.2412@deletethis.bbsrc.ac.uk> NNTP-Posting-Host: pc0258.avri.bbsrc.ac.uk Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 3.0 (Win95; I) michael.baron@deletethis.bbsrc.ac.uk wrote: > > > I have also posted it to Don Gilbert's iubio archive in the states, but > I haven't checked where exactly it is filed. If you have problems > getting hold of it, drop me a line. > > Michael As an addendum, I checked the iubio archive, and it is not there at the moment. HOWEVER, the previous version (v 1.08) was incorrectly labelled by the guy who submitted it as v2.08. Check the date of anything you download, it should be this year. The version is 2.01 (or 2.1, I'm not professional enough to remember off-hand ;-) ). cheers, michael From owner-software@net.bio.net Mon May 04 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!news.bbnplanet.com!newsfeed.wli.net!news-peer-west.sprintlink.net!news-peer.sprintlink.net!news.sprintlink.net!howland.erols.net!rill.news.pipex.net!pipex!main.de.uu.net!news-reader.dortmund.de.uu.net!not-for-mail From: Kay Hofmann Newsgroups: bionet.software Subject: Re: publication-quality protein alignments Date: Tue, 05 May 1998 17:17:32 +0000 Organization: MEMOREC Lines: 25 Message-ID: <354F49AC.F526BCF@isrec.unil.ch> References: <354E208A.AF43F945@nih.gov> <354EF06D.2412@deletethis.bbsrc.ac.uk> NNTP-Posting-Host: 194.175.75.210 Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.05 [en] (X11; I; Linux 2.0.32 i686) > > I am looking for some software to produce attractive proteins alignments > > suitable for publication. It possible, this software should run on a > > Macintosh or a Web-based platform. > > May I suggest MacBoxShade, which is designed to do just this. Output is > in EPSF, PS, PICT, RTF and ASCII formats, lots of options, Mac-type user > interface, complete control of colours used. Input is GCG/ClustalW MSF > file format. > > I think it is pretty cool, but then I would, as I am the author ;-) > > ftp://ulrec3.unil.ch/pub/boxshade/MacBoxshade > And then, there is also a WWW server for Boxshade running under http://ulrec3.unil.ch/software/ =========================================================== Kay Hofmann, PhD Tel: +49 (221) 950 4814 Bioinformatics Group FAX: +49 (221) 950 4848 MEMOREC Stoffel GmbH Stoeckheimer Weg 1 D50829 Koeln/Germany E-mail: Kay.Hofmann@memorec.com From owner-software@net.bio.net Mon May 04 23:00:00 1998 Path: biosci!news.Stanford.EDU!Cabal.CESspool!bofh.vszbr.cz!newsfeed.eris.dera.gov.uk!delos!server1.netnews.ja.net!hgmp.mrc.ac.uk!not-for-mail From: Ewan Birney Newsgroups: bionet.software Subject: Re: publication-quality protein alignments Date: Tue, 05 May 1998 11:54:50 +0100 Organization: MRC Human Genome Mapping Project Resource Centre Lines: 31 Message-ID: <354EEFF9.1394@sanger.ac.uk> References: <354E208A.AF43F945@nih.gov> NNTP-Posting-Host: ics-sparc1.sanger.ac.uk Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 3.0 (X11; I; SunOS 5.5 sun4u) CC: Jonathan_Epstein@nih.gov Jonathan Epstein wrote: > > I am looking for some software to produce attractive proteins alignments > suitable for publication. It possible, this software should run on a > Macintosh or a Web-based platform. > Hmmm. There is a non-obvious set of choices - including Seaview (biom3.univ-lyon1.fr - ftp - unix) alscript (-C program - makes ps. barton.ebi.ac.uk) genedoc (windows NT) belvu (I like it... ftp://ncbi.nlm.nih.gov/pub/esr/ - unix) As for pure Web based ones, I know of one java alignment viewer... but sadly unreleased yet... ;( > I also looking for software to produce publication-quality phylogenetic > trees. > treetool (ftp from biom3.univ-lyon1.fr ) is the only one I know > Thanks in advance, > > - Jonathan -- Ewan Birney http://www.sanger.ac.uk/Users/birney/ From owner-software@net.bio.net Mon May 04 23:00:00 1998 Path: biosci!news.Stanford.EDU!agate!newsfeed.wli.net!news-out.internetmci.com!newsfeed.internetmci.com!198.138.0.5!newshub.northeast.verio.net!Cabal.CESspool!bofh.vszbr.cz!newsfeed.eris.dera.gov.uk!delos!server1.netnews.ja.net!hgmp.mrc.ac.uk!not-for-mail From: Geoff Barton Newsgroups: bionet.software Subject: Re: What happened to the EBI website? Date: Tue, 05 May 1998 12:27:03 +0100 Organization: EMBL-European Bioinformatics Institute Lines: 21 Message-ID: <354EF787.3E15B614@btinternet.com> References: <354dd01f.2930539@netnews.upenn.edu> <6ikk8m$jhf@news.u-strasbg.fr> <354E2209.A7B58CEC@hgmp.mrc.ac.uk> <6imgi1$l52@news.u-strasbg.fr> Reply-To: geoff@ebi.ac.uk NNTP-Posting-Host: dhcp14.ebi.ac.uk Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.05 [en] (WinNT; I) There has been a problem with one of our compute/file servers (gin) and this will have affected access to the ftp site and some of the www services. The problems occurred on Monday afternoon 4/May/98 and Tuesday morning 5/May/98. Geoff. Mike Mitchell wrote: > Apparantly they have been having problems with the ftp server. However, it is > responding (to me) at present (5th May 11:23 BST), as is the WWW server... > > -- > Michael Mitchell "Smoke me a kipper, > User Support I'll be back for breakfast." > Molecular Biology Software Ace Rimmer, Test Pilot > +44 (0)171 269 3115 BBC-TV Red Dwarf ENFJ From owner-software@net.bio.net Mon May 04 23:00:00 1998 Path: biosci!rutgers!rockyd.rockefeller.edu!newsfeed.nyu.edu!newspump.monmouth.com!newspeer.monmouth.com!woodstock.news.demon.net!demon!news.demon.co.uk!demon!andsystems.demon.co.uk!not-for-mail From: "Steve Frazer" Newsgroups: alt.collecting.stamps.software,alt.comp.software,alt.comp.software.easter-eggs,alt.comp.software.tools,alt.fan.dean-stark.software,alt.fan.dean-stark.software.tester,alt.fan.soft-targets,alt.med.software,bionet.software,bionet.software.acedb,bio Subject: Re: PhotoShop 4.0 Serial Number Wanted. Date: Tue, 05 May 1998 21:47:37 GMT Organization: Home Message-ID: <01bd786f$69b1b9c0$224bedc1@steve> References: <01bd75f6$4ef18e60$70f352ca@default> NNTP-Posting-Host: andsystems.demon.co.uk X-NNTP-Posting-Host: andsystems.demon.co.uk:193.237.75.34 X-Trace: news.demon.co.uk 894404857 nnrp-03:24631 NO-IDENT andsystems.demon.co.uk:193.237.75.34 X-Complaints-To: abuse@demon.net X-Newsreader: Microsoft Internet News 4.70.1155 Lines: 16 Xref: biosci bionet.software:21005 bionet.software.acedb:1742 Andy wrote in article <01bd75f6$4ef18e60$70f352ca@default>... > I cannot get my correct serial number of photoshop 4.0 from my package. May > someone kindly to give me the serial number of photoshop 4.0 so that I can > start my work. > > My E-mail address is JP838688@hkstar.com > > > Thank you for your kind attention and help. > Yes - the people who SOLD it to you should be able to help...... From owner-software@net.bio.net Tue May 05 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!newsfeed.internetmci.com!193.174.75.126!news-was.dfn.de!news-fra1.dfn.de!news-koe1.dfn.de!news-han1.dfn.de!news.gwdg.de!not-for-mail From: Arne Mueller Newsgroups: bionet.software Subject: Re: Raw haploid DNA in vivo Date: Wed, 06 May 1998 01:59:57 +0000 Organization: GWDG, Goettingen Lines: 26 Message-ID: <354FC41D.A93A5657@gwdg.de> References: <35439AAC.1A05@X.com> NNTP-Posting-Host: roko28.stud.uni-goettingen.de Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.05 [en] (X11; I; Linux 2.0.33 i586) X wrote: > > Yummy ! :) you should keep it on ice ... or store it in another newsgroup Arne > > ------------------------------------------------------------------------ > [Image] -- Arne Mueller Institut fuer Mikrobiologie und Genetik Abt. Molekulare Genetik und Praeparative Molekularbiologie Universitaet Goettingen Grisebachstr. 8 37077 Goettingen Germany phone: +49-551-399654 | fax : +49-551-393805 email: amuelle3@gwdg.de | http://www.img.bio.uni-goettingen.de From owner-software@net.bio.net Tue May 05 23:00:00 1998 Path: biosci!agate!arclight.uoregon.edu!news-out.internetmci.com!newsfeed.internetmci.com!192.26.210.166!sunqbc.risq.qc.ca!news.uow.edu.au!metro!not-for-mail From: Phil Dynamin Newsgroups: bionet.software Subject: Re: Software for linear regression? (protein std curve) Date: Wed, 06 May 1998 21:39:37 +1000 Organization: The University of Sydney, NSW, Australia Lines: 21 Message-ID: <35504BF9.AE1AB3BE@hotmail.com> References: <354d7b62.2973062@news.cineca.it> NNTP-Posting-Host: 129.78.220.146 Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.03 [en] (Win95; I) We simply use Excel which has a linear regression function called TREND. Type in standards, readings and unknowns, then use TREND to calculate the protein concentration in each unknown. Spend a short time playing with the help file and create a nice spreadsheet. Then just use it over and over. It even draws the curve with the regression line and generates a report if you wish. (I did not reply by direct email. Why not read the Newsgroup?) Phil, Sydney Lorenzo Colloreta wrote: > Is there a freeware software for computing linear regression on a > standard protein curve and calculate sample concentration ? > > Please reply by email as well. > Thanks. From owner-software@net.bio.net Tue May 05 23:00:00 1998 Path: biosci!news.Stanford.EDU!Cabal.CESspool!bofh.vszbr.cz!fu-berlin.de!jussieu.fr!saphir.jouy.inra.fr!malbert From: malbert@st-gilles.rennes.inra.fr (Charles Henri Malbert) Newsgroups: bionet.software Subject: Glucose clamp software source Date: Wed, 06 May 1998 18:37:34 +0200 Organization: INRA Lines: 12 Message-ID: NNTP-Posting-Host: malbert.rennes.inra.fr X-Newsreader: MT-NewsWatcher 2.3.4 Hello, I am looking for a glucose clamp software (euglycemic or hyper or both) thanks -- Dr C.H Malbert Unite de controle de l'ingestion et des flux digestifs Station de Recherches Porcines, 35590 Saint gilles, France Tel: (33) 99 28 50 71 Fax: (33) 99 28 50 80. From owner-software@net.bio.net Tue May 05 23:00:00 1998 Path: biosci!STRETCH.MED.BUFFALO.EDU!qub From: qub@STRETCH.MED.BUFFALO.EDU (QuB) Newsgroups: bionet.software Subject: "Practical Ion Channel Kinetics" Date: 5 May 1998 19:35:35 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 17 Sender: daemon@net.bio.net Distribution: world Message-ID: <354FCC30.53878ECA@stretch.med.buffalo.edu> NNTP-Posting-Host: net.bio.net "Practical Ion Channel Kinetics" June 13-14 or July 18-19 School of Biomedical Sciences SUNY Buffalo This is a two-day hands-on course, taught by Drs Fenq Qin, Tony Auerbach and Fred Sachs. It is designed to teach analysis of single channel data using the programs from the QUB Maximum Likelihood Software Suite. The QUB software is free, and is available for downloading from this www.qub.buffalo.edu Further details are available from www.qub.buffalo.edu or from qub@stretch.med.buffalo.edu From owner-software@net.bio.net Thu May 07 23:00:00 1998 Path: biosci!rutgers!rockyd.rockefeller.edu!newsfeed.nyu.edu!feed.nntp.acc.ca!newsfeed.direct.ca!pln-w!extra.newsguy.com!lotsanews.com!enews.sgi.com!EU.net!uunet!in4.uu.net!grolier!not-for-mail From: "Amine Pascale" Newsgroups: alt.collecting.stamps.software,alt.comp.software,alt.comp.software.easter-eggs,alt.comp.software.tools,alt.fan.dean-stark.software,alt.fan.dean-stark.software.tester,alt.fan.soft-targets,alt.med.software,bionet.software,bionet.software.acedb,bio Subject: Re: PhotoShop 4.0 Serial Number Wanted. Date: Fri, 8 May 1998 01:49:11 +0200 Organization: Organisation du Travail Lines: 27 Message-ID: <6ithap$4r7$1@front6.grolier.fr> References: <01bd75f6$4ef18e60$70f352ca@default> <01bd786f$69b1b9c0$224bedc1@steve> NNTP-Posting-Host: bordeaux1-202.club-internet.fr X-Newsreader: Microsoft Outlook Express 4.72.2106.4 X-MimeOLE: Produced By Microsoft MimeOLE V4.72.2106.4 Xref: biosci bionet.software:21011 bionet.software.acedb:1744 And if it was a Bill Gates's program, will you say the same thing - go back to your seller and he'll give you the number- ? I think a PC is enough expensive - how many people in the world got one ?- but sufficiently lucrative for the most firms. The aim 's that the more people get his PC and all the programs he need (to work). Steve Frazer a écrit dans le message <01bd786f$69b1b9c0$224bedc1@steve>... > > >Andy wrote in article ><01bd75f6$4ef18e60$70f352ca@default>... >> I cannot get my correct serial number of photoshop 4.0 from my package. >May >> someone kindly to give me the serial number of photoshop 4.0 so that I >can >> start my work. >> >> My E-mail address is JP838688@hkstar.com >> >> >> Thank you for your kind attention and help. >> >Yes - the people who SOLD it to you should be able to help...... From owner-software@net.bio.net Thu May 07 23:00:00 1998 Newsgroups: bionet.software Path: biosci!news.Stanford.EDU!Cabal.CESspool!bofh.vszbr.cz!howland.erols.net!news-peer.sprintlink.net!news.sprintlink.net!netnews.com!ix.netcom.com!graul From: graul@netcom.com (Richard C. Graul) Subject: INCA - Java based BLAST client X-Sender: graul@netcom.com (Richard C. Graul) Message-ID: Sender: graul@netcom11.netcom.com Reply-To: graul@netcom.com (Richard C. Graul) Organization: Netcom On-Line Services X-Newsreader: NN version 6.5.0 CURRENT #9 Date: Fri, 8 May 1998 02:56:37 GMT Lines: 25 http://itsa.ucsf.edu/~gram/home/inca/ Iterative Neighborhood Cluster Analysis INCA is a Java applet that runs BLAST. INCA is useful for elucidating distant relationships. Give INCA a starter sequence and it finds related sequences. INCA runs BLAST on the starter sequence and then runs BLAST on the matching sequences. INCA keeps track of all the results. INCA is useful for finding ESTs. You can take the result of the first pass of INCA and use it to probe the EST database and suck out all the related ESTs. http://itsa.ucsf.edu/~gram/home/inca/ Richard C. Graul (graul@netcom.com) Dept. of Pharm. Chem. & School of Pharmacy UCSF From owner-software@net.bio.net Thu May 07 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!news.bbnplanet.com!xfer.kren.ne.kr!xfer.kren.nm.kr!newsfeed.dacom.co.kr!news.kddnet.ad.jp!asahi-net!not-for-mail From: "=?iso-2022-jp?B?GyRCQFA5dRsoQiAbJEI3SUknGyhC?=" Newsgroups: bionet.software Subject: Re: Help: Detection of hairpins/T7 termination signals Date: Sat, 9 May 1998 00:31:40 +0900 Organization: =?iso-2022-jp?B?GyRCRWwlPSE8IUozdCFLGyhC?= Lines: 37 Message-ID: <6iv8kd$3li0$1@neptune.asahi-net.or.jp> References: <354DF347.C6258EA7@mti-n.uni-jena.de> NNTP-Posting-Host: ppp195101.asahi-net.or.jp Mime-Version: 1.0 Content-Type: text/plain; charset="iso-2022-jp" Content-Transfer-Encoding: 7bit X-Trace: neptune.asahi-net.or.jp 894641613 120384 (None) 210.155.195.101 X-Complaints-To: ap-net@asahi-net.or.jp X-Newsreader: Microsoft Outlook Express 4.72.2106.4 X-Mimeole: Produced By Microsoft MimeOLE V4.72.2106.4 I would suggest you to try 'mFold server' in Washington University for predicting secondary structure of RNA and DNA, which might be available for anyone without any limitation. You could get in it from 'http://www.ibc.wustl.edu/~zuker/rna'. ///DNARNADNARNADNARNADNARNADNARNADNARNA/// Takahiko Ishiguro, Ph. D. Senior Research Manager, Clinical Diagnostics TOSOH CORPORATION Tokyo Research Laboratories (2743-1 Hayakawa, Ayase-shi, Kanagawa 252, JAPAN) e-mail: isiguro@tosoh.co.jp (office) isiguro@home.email.ne.jp (home) ///ANRANDANRANDANRANDANRANDANRANDANRAND/// "U. Gausmann" wrote in message <354DF347.C6258EA7@mti-n.uni-jena.de>... >Hallo, > >does anybody know how to detect secondary structures in RNA? >I 'd like to know if my specific sequence (mammalian) contains >termination signals for T7 polymerase. >I think hairpin structures result in termination of transcription >- am I right? > >Thank you for help, >Ulrike > > >-- >Ulrike Gausmann | D-07743 Jena >Institut fuer Anatomie | Germany >Anatomie II | Tel +49 (0)3641 938553 >Teichgraben 7 | email ugau@mti-n.uni-jena.de > > From owner-software@net.bio.net Thu May 07 23:00:00 1998 Path: biosci!rutgers!rockyd.rockefeller.edu!news-nysernet-16.sprintlink.net!206.229.87.26!news-east.sprintlink.net!news-peer.sprintlink.net!news-backup-east.sprintlink.net!news.sprintlink.net!195.173.173.151!woodstock.news.demon.net!demon!news.demon.co.uk!demon!andsystems.demon.co.uk!steve From: Steve Newsgroups: alt.collecting.stamps.software,alt.comp.software,alt.comp.software.easter-eggs,alt.comp.software.tools,alt.fan.dean-stark.software,alt.fan.dean-stark.software.tester,alt.fan.soft-targets,alt.med.software,bionet.software,bionet.software.acedb,bio Subject: Re: PhotoShop 4.0 Serial Number Wanted. Date: Fri, 8 May 1998 15:33:29 +0100 Message-ID: References: <01bd75f6$4ef18e60$70f352ca@default> <01bd786f$69b1b9c0$224bedc1@steve> <6ithap$4r7$1@front6.grolier.fr> NNTP-Posting-Host: andsystems.demon.co.uk X-NNTP-Posting-Host: andsystems.demon.co.uk:193.237.75.34 X-Trace: news.demon.co.uk 894647866 nnrp-11:15838 NO-IDENT andsystems.demon.co.uk:193.237.75.34 X-Complaints-To: abuse@demon.net MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Content-Type: text/plain; charset=iso-8859-1 X-Newsreader: Turnpike (32) Trial Version 3.05 Lines: 36 Xref: biosci bionet.software:21016 bionet.software.acedb:1746 Yes I would. Every peice of software I own is an original, Bill Gates or no Bill Gates. Just because someone is rich it doesn't justify stealing from them! In article <6ithap$4r7$1@front6.grolier.fr>, Amine Pascale writes >And if it was a Bill Gates's program, will you say the same thing - go back >to your seller and he'll give you the number- ? >I think a PC is enough expensive - how many people in the world got one ?- >but sufficiently lucrative for the most firms. >The aim 's that the more people get his PC and all the programs he need (to >work). > > >Steve Frazer a écrit dans le message <01bd786f$69b1b9c0$224bedc1@steve>... >> >> >>Andy wrote in article >><01bd75f6$4ef18e60$70f352ca@default>... >>> I cannot get my correct serial number of photoshop 4.0 from my package. >>May >>> someone kindly to give me the serial number of photoshop 4.0 so that I >>can >>> start my work. >>> >>> My E-mail address is JP838688@hkstar.com >>> >>> >>> Thank you for your kind attention and help. >>> >>Yes - the people who SOLD it to you should be able to help...... > > -- Steve From owner-software@net.bio.net Thu May 07 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!news.maxwell.syr.edu!news-ge.switch.ch!news.rediris.es!news.cica.es!bioq4.cie.uma.es!user From: someone@somewhere.world (Bioquímica) Newsgroups: bionet.software Subject: Re: Software for linear regression? (protein std curve) Date: Wed, 06 May 1998 16:10:20 +0200 Organization: UMA Lines: 51 Message-ID: References: <354d7b62.2973062@news.cineca.it> NNTP-Posting-Host: bioq4.cie.uma.es Mime-Version: 1.0 Content-Type: text/plain; charset=iso-8859-1 Content-Transfer-Encoding: 8bit In article <354d7b62.2973062@news.cineca.it>, lcs@>SPAMSUCKS Is there a freeware software for computing linear regression on a > standard protein curve and calculate sample concentration ? A new macintosh software has been released to: - construct linear regressions - interpolate in the equation deduced - study microbiological cultures - calculate the kinetic constans for an enzyme reaction Its essentials are: Application Lines&Kinetics Version 1.0 Update Mars 98 Author M.G. Claros Literature Embnet.News 5, 7-9 http://www.ie.embnet.org/embnet.news/vol5_1/kinetics.html Disk size 125 Kb RAM Size The minimum requested by HyperCard Description A graphic way to calculate linear regressions with normal or logarithmic data, the doubling time of a microbial culture, and the kinetic parameters for an enzyme reaction. Notes Lines&Kinetics is a HyperCard Stack programmed in HyperTalk. It requires HyperCard (Player) 2.1 or later and the Home stack provided with Lines&Kinetics. The describing article is include in the Home stack that accompanies the program stack. Is is also available at the URL cited above or from the author (a reprint) Where now ftp://ftp.rediris.es/software/incoming/science/ ftp://ftp.ens.fr/pub/molbio/ info-mac mirrors (info-mac/sci/) Myself. Very soon ftp://ftp.ebi.ac.uk/pub/software/mac/ ftp://iubio.bio.indiana.edu/molbio/mac/ I hope you find it useful. In such case, please include the cited article among your references Manuel G. Claros claros@uma.es claros@cica.es From owner-software@net.bio.net Thu May 07 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!nntp.abs.net!island.idirect.com!news.uunet.ca!not-for-mail From: "Victor Graziano" Newsgroups: bionet.software Subject: Re: publication-quality protein alignments Date: Fri, 8 May 1998 15:48:52 -0700 Organization: UUNET Canada News Transport Lines: 3 Message-ID: <6ivni1$1t9$1@nntp1.uunet.ca> NNTP-Posting-Host: 207.176.233.62 X-Newsreader: Microsoft Outlook Express 4.72.2106.4 X-MimeOLE: Produced By Microsoft MimeOLE V4.72.2106.4 Try the Protein Manager demo available from www.acdlabs.com. From owner-software@net.bio.net Thu May 07 23:00:00 1998 Path: biosci!bcm.tmc.edu!news.msfc.nasa.gov!newsfeed.internetmci.com!204.174.67.209!news.bctel.net!newsfeed.smartt.com!not-for-mail From: larry@nonam.com (Larry ) Newsgroups: alt.collecting.stamps.software,alt.comp.software,alt.comp.software.easter-eggs,alt.comp.software.tools,alt.fan.dean-stark.software,alt.fan.dean-stark.software.tester,alt.fan.soft-targets,alt.med.software,bionet.software,bionet.software.acedb,bio Subject: Re: PhotoShop 4.0 Serial Number Wanted. Date: Fri, 08 May 1998 17:49:25 GMT Organization: KTK Communications Ltd. (SmarttNet, http://www.smartt.com) Lines: 36 Message-ID: <355344e9.9519275@192.168.0.1> References: <01bd75f6$4ef18e60$70f352ca@default> <01bd786f$69b1b9c0$224bedc1@steve> <6ithap$4r7$1@front6.grolier.fr> NNTP-Posting-Host: burn-mx08011.smartt.com Mime-Version: 1.0 Content-Type: text/plain; charset=ISO-8859-1 Content-Transfer-Encoding: 8bit X-Newsreader: Forte Agent 1.5/32.451 Xref: biosci bionet.software:21017 bionet.software.acedb:1747 I don't think the guys who spent years writing Photoshop sell PC's. So grab a brain. The guy's trying to steal software. The result of that is the rest of us wind up paying for it in higher software prices. If you defend the process, it tells me you're probably doing it too. On Fri, 8 May 1998 01:49:11 +0200, "Amine Pascale" wrote: >And if it was a Bill Gates's program, will you say the same thing - go back >to your seller and he'll give you the number- ? >I think a PC is enough expensive - how many people in the world got one ?- >but sufficiently lucrative for the most firms. >The aim 's that the more people get his PC and all the programs he need (to >work). > > >Steve Frazer a écrit dans le message <01bd786f$69b1b9c0$224bedc1@steve>... >> >> >>Andy wrote in article >><01bd75f6$4ef18e60$70f352ca@default>... >>> I cannot get my correct serial number of photoshop 4.0 from my package. >>May >>> someone kindly to give me the serial number of photoshop 4.0 so that I >>can >>> start my work. >>> >>> My E-mail address is JP838688@hkstar.com >>> >>> >>> Thank you for your kind attention and help. >>> >>Yes - the people who SOLD it to you should be able to help...... > From owner-software@net.bio.net Thu May 07 23:00:00 1998 Path: biosci!rutgers!rockyd.rockefeller.edu!newsfeed.nyu.edu!news.idt.net!news-peer-east.sprintlink.net!news-peer.sprintlink.net!news.sprintlink.net!cs.utexas.edu!news.unt.edu!news From: Christopher Fields Newsgroups: alt.collecting.stamps.software,alt.comp.software,alt.comp.software.easter-eggs,alt.comp.software.tools,alt.fan.dean-stark.software,alt.fan.dean-stark.software.tester,alt.fan.soft-targets,alt.med.software,bionet.software,bionet.software Subject: Re: PhotoShop 4.0 Serial Number Wanted. Date: Fri, 08 May 1998 16:41:29 -0500 Organization: University of North Texas Lines: 69 Message-ID: <35537C09.CACF7247@jove.acs.unt.edu> References: <01bd75f6$4ef18e60$70f352ca@default> <01bd786f$69b1b9c0$224bedc1@steve> <6ithap$4r7$1@front6.grolier.fr> NNTP-Posting-Host: gerard.biol.unt.edu Mime-Version: 1.0 Content-Type: text/plain; charset=koi8-r Content-Transfer-Encoding: 8bit X-Mailer: Mozilla 4.03 [en] (WinNT; I) Xref: biosci bionet.software:21019 So you're justifying stealing software? If you think for a nanosecond that he's not stealing, then get real, Don Quixote. Anyone with a sound mind could realize that he's "fishing" for anyone who'd give him a serial number. I hope he sends it in to Adobe and gets caught, b/c I'm sure some genius like you gave him the number. You see, if he sends it and the number comes up in their database as already in use, then whoever sent it would lose THEIR license and get busted hard for software theft, a crime that creates that "expensive" PC software you are so incoherently babbling about. I own a PC and Windows95. I don't agree with everything that Bill Gates does, but blaming the high price of software on him is extreme to the Nth degree, esp. when considering that software pirates whom steal the programs are the ones who eventually drive the price upwards due to the need to implement anti-piracy measures and pay the programmers on top of trying to make a profit. Furthermore, there is so much freeware and shareware out there that you might find something of use for free!! The programmers who post in this newsgroup (Higgins, Gilbert, Felsenstein, Pearson, Kuzmic, Nicholas, anyone at NCBI and anyone else I forgot) release free software that is very useful. All they as for is the recognition of using their software and registering, something that I'm more than willing to do. I think that they might be a little perturbed at the idea of posting serial numbers for software that is obviously stolen. Yeah, sure, molecular biology software is expensive, something which I think is a legitimate gripe. However, let the guy, if he's legitimate, go back to the retailer who sold him the software to get the serial number; or better yet, send a proof of purchase directly to the manufacturer, just like anybody else. Remember, this is standard policy for exchanges for ANYTHING, not just software. I had a problem with mine that the people at Adobe cleared up rather quickly and efficiently. I am a graduate student. That means that I can't really afford a nice software package. I, however, did manage to pull enough money from my own pocket to buy Office and a few Adobe products for the very simple reason that, in my business, it's "publish or perish." They are completely mine (registration number and all), so I have a luxury that many students can't afford. However, I must remind you that I was never without access to computers (university computer labs). So, from even my "poor graduate student" POV, you are wrong. C. J. Fields Amine Pascale wrote: > And if it was a Bill Gates's program, will you say the same thing - go back > to your seller and he'll give you the number- ? > I think a PC is enough expensive - how many people in the world got one ?- > but sufficiently lucrative for the most firms. > The aim 's that the more people get his PC and all the programs he need (to > work). > > Steve Frazer a ûcrit dans le message <01bd786f$69b1b9c0$224bedc1@steve>... > > > > > >Andy wrote in article > ><01bd75f6$4ef18e60$70f352ca@default>... > >> I cannot get my correct serial number of photoshop 4.0 from my package. > >May > >> someone kindly to give me the serial number of photoshop 4.0 so that I > >can > >> start my work. > >> > >> My E-mail address is JP838688@hkstar.com > >> > >> > >> Thank you for your kind attention and help. > >> > >Yes - the people who SOLD it to you should be able to help...... From owner-software@net.bio.net Thu May 07 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!feed2.news.erols.com!erols!newsfeed.ecrc.net!newscore.univie.ac.at!news-ge.switch.ch!news.rediris.es!lgdx06.lg.ehu.es!not-for-mail From: Asier Fullaondo Elordui-Zapaterietxe Newsgroups: bionet.software Subject: RNA secondary structures. Date: Fri, 08 May 1998 15:47:25 +0200 Organization: Euskal Herriko Unibertsitatea Lines: 8 Message-ID: <35530CED.7743@lg.ehu.es> Reply-To: gvpfuela@lg.ehu.es NNTP-Posting-Host: lcpxcg.lc.ehu.es Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 3.0 (Win95; I) Hi there: Does anyone know any good program to design ready-to-publish RNA structures. I use mfold of the GCG package and also som web-sites to get my secondary structures but I have not any program to edit this outputs. Thank you in advance, Oskar Fdz-Capetillo Ruiz From owner-software@net.bio.net Fri May 08 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!newsfeed.internetmci.com!198.82.160.249!news.vt.edu!solaris.cc.vt.edu!news.cc.ukans.edu!not-for-mail From: PGegen@UKans.nospam.edu (Dr. Peter Gegenheimer) Newsgroups: alt.comp.software,alt.comp.software.tools,alt.med.software,bionet.software,alt.collecting.stamps.software Subject: Re: PhotoShop 4.0 Serial Number Wanted. Date: 9 May 1998 02:46:38 GMT Organization: Univ. Kansas (Biochemistry) Lines: 57 Message-ID: <7opiGDf98QgB-pn2-l1iu301JvFrt@rnaworld.bio.ukans.edu> References: <01bd75f6$4ef18e60$70f352ca@default> <01bd786f$69b1b9c0$224bedc1@steve> Reply-To: PGegen@UKans.nospam.edu NNTP-Posting-Host: rnaworld.bio.ukans.edu Mime-Version: 1.0 Content-Type: text/plain; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable X-Newsreader: ProNews/2 Version 1.00 On Tue, 5 May 1998 21:47:37, "Steve Frazer" wrote: > Andy wrote in article > <01bd75f6$4ef18e60$70f352ca@default>... > > I cannot get my correct serial number of photoshop 4.0 from my package. > May someone kindly to give me the serial number of photoshop 4.0 so that I can start my work. > > > Yes - the people who SOLD it to you should be able to help...... Sheesh! Right on! (How can WE give him the serial # for HIS Photoshop?) In defense of paying for software, I'd like to add another angle. I have used literally hundreds of programs over the years, both commercial (_including_ shareware) and freeware (especially programs developed by scientists). It is easy to appreciate the difference between a quick & dirty program that sort of does the job, and one which is well-written, well-behaved, doesn't crash & lose your data if you misspell a command, and does what you want it to do in a way that makes sense to you. That sort of quality ought to be worth paying for; that sort of care and attention and dedication to quality by the programmers ought to be rewarded. More importantly, since I have at times been an amateur programmer myself (an RNA fingerprinting program ca. 1990), I know how exhausting, frustrating, and time-consuming it is to develop a program that works properly, let alone has an elegant user interface. Further, most specialized software (not Photoshop) is coded by a small number of programmers - two or three good people have written commercial word processors, molecular biology programs, etc. These programmers are trying to make good software that does what you want, the way you want, and when you want. For this they should be vilified & ripped off? My bottom line: you want free Photoshop, fine! Go ahead and write one yourself. (P.S. do it in C++ or Java.) Or _pay_ someone who knows what they're doing to write it. o------------------------------------------------------------------- -o | Dr. Peter Gegenheimer | Vox: 785-864-3939 FAX: 785-864-5321 | | Department of Biochemistry, | PGegen@UKans.nospam.edu | | Cell & Molecular Biology | http://RNAworld.Bio.UKans.edu/ | | Department of Botany | | | University of Kansas | | | 2045 Haworth Hall | "The sleep of reason produces | | Lawrence KS 66045-2106 | monsters." Goya | o_____________________________|_____________________________________ _o From owner-software@net.bio.net Fri May 08 23:00:00 1998 Path: biosci!rutgers!rockyd.rockefeller.edu!newsfeed.nyu.edu!newsfeed.gte.net!uunet!in5.uu.net!hearst.acc.Virginia.EDU!aruba.odu.edu!reznor.larc.nasa.gov!asmobj.larc.nasa.gov!jaapjl From: jaapjl@asmobj.larc.nasa.gov (Lee Jaap) Newsgroups: alt.collecting.stamps.software,alt.comp.software,alt.comp.software.easter-eggs,alt.comp.software.tools,alt.fan.dean-stark.software,alt.fan.dean-stark.software.tester,alt.fan.soft-targets,alt.med.software,bionet.software,bionet.software.acedb,bio Subject: Re: PhotoShop 4.0 Serial Number Wanted. Followup-To: alt.collecting.stamps.software,alt.comp.software,alt.comp.software.tools,alt.fan.dean-stark.software,alt.fan.dean-stark.software.tester,alt.fan.soft-targets,alt.med.software,bionet.software,bionet.software.acedb,bio Date: 08 May 1998 19:11:43 GMT Organization: probably not speaking for AS&M Inc Lines: 53 Message-ID: References: <01bd75f6$4ef18e60$70f352ca@default> <01bd786f$69b1b9c0$224bedc1@steve> <6ithap$4r7$1@front6.grolier.fr> Reply-To: J Lee Jaap NNTP-Posting-Host: asmobj.larc.nasa.gov In-reply-to: Steve's message of Fri, 8 May 1998 15:33:29 +0100 Xref: biosci bionet.software:21020 bionet.software.acedb:1748 Where's the easter egg? If you aren't discussing easter eggs, please drop the easter eggs group from the newsgroups header. Yes I know, the original spam shouldn't have included it, but someone who follows up an article is responsible for where he posts. In article Steve writes: |>Newsgroups: alt.collecting.stamps.software,alt.comp.software,alt.comp.software.easter-eggs,alt.comp.software.tools,alt.fan.dean-stark.software,alt.fan.dean-stark.software.tester,alt.fan.soft-targets,alt.med.software,bionet.software,bionet.software.acedb,bio |> |>Yes I would. Every peice of software I own is an original, Bill Gates or |>no Bill Gates. Just because someone is rich it doesn't justify stealing |>from them! |> |>In article <6ithap$4r7$1@front6.grolier.fr>, Amine Pascale internet.fr> writes |>>And if it was a Bill Gates's program, will you say the same thing - go back |>>to your seller and he'll give you the number- ? |>>I think a PC is enough expensive - how many people in the world got one ?- |>>but sufficiently lucrative for the most firms. |>>The aim 's that the more people get his PC and all the programs he need (to |>>work). |>> |>> |>>Steve Frazer a écrit dans le message <01bd786f$69b1b9c0$224bedc1@steve>... |>>> |>>> |>>>Andy wrote in article |>>><01bd75f6$4ef18e60$70f352ca@default>... |>>>> I cannot get my correct serial number of photoshop 4.0 from my package. |>>>May |>>>> someone kindly to give me the serial number of photoshop 4.0 so that I |>>>can |>>>> start my work. |>>>> |>>>> My E-mail address is JP838688@hkstar.com |>>>> |>>>> |>>>> Thank you for your kind attention and help. |>>>> |>>>Yes - the people who SOLD it to you should be able to help...... |>> |>> |> |>-- |>Steve [Followups outahere] -- J Lee Jaap From owner-software@net.bio.net Fri May 08 23:00:00 1998 Path: biosci!daresbury!uninett.no!howland.erols.net!fastnet!ptdnetP!newsgate.ptd.net!news.cc.ukans.edu!not-for-mail From: PGegen@UKans.nospam.edu (Dr. Peter Gegenheimer) Newsgroups: alt.comp.software,alt.comp.software.financial,alt.comp.software.financial.peachtree,alt.comp.software.tools,alt.geo-software,alt.med.software,bionet.software,bionet.software.acedb,ab.software.developers,alt.binaries.w-software Subject: Re: S/N Partition Magic needed Date: 9 May 1998 02:54:55 GMT Organization: Univ. Kansas (Biochemistry) Lines: 61 Message-ID: <7opiGDf98QgB-pn2-9dMxEPN5nc6n@rnaworld.bio.ukans.edu> References: <353EDEEE.2814A17E@idirect.com> <6i84ii$gt8@chile.earthlink.net> <6i9ecg$ppv$1@news3.isdnet.net> <7opiGDf98QgB-pn2-pfdfdv1Vdndd@rnaworld.bio.ukans.edu> <6ik78e$8kl@suriname.earthlink.net> Reply-To: PGegen@UKans.nospam.edu NNTP-Posting-Host: rnaworld.bio.ukans.edu Mime-Version: 1.0 Content-Type: text/plain; charset="iso-8859-1" Content-Transfer-Encoding: quoted-printable X-Newsreader: ProNews/2 Version 1.00 Xref: biosci bionet.software:21022 bionet.software.acedb:1749 OK, enough already. Please see the responses to the Photoshop code-seeker in these newsgroups. Please realize that usually no-one but the software manufacturer or retailer can possibly know _your_ code. I sympathize with the idea that if you paid for a copy, then you ought to be able to use it. But the mfr. or retailer will help you with no questions & no money (you did register the program, right?) and probably better than the flakes who hang out in newsgroups (other than us...). Did they not answer their phone? ----- On Mon, 4 May 1998 11:01:53, "Farrukh Imtiaz, M.D." wrote: > Yeah right. Tell them I got the code PM302UK-105693. I still own a legal > copy. Software subscribers are at peril if they loose their serials and > newsgroups help them faster and better than the software manufacturer and > with no questions asked or money exchanged. Now you can dig into your gold. > Dr. Peter Gegenheimer wrote in message > <7opiGDf98QgB-pn2-pfdfdv1Vdndd@rnaworld.bio.ukans.edu>... > On Thu, 30 Apr 1998 08:59:22, "Myriam Pinon" > wrote: > > > Hi, > > I have an illegal copy of Partiton Magic 3 and I never had the > installation > > code. Can anyone help me too? > > M. > ^^ I assume this is what you think the following message is > _really_ saying. Otherwise....!#? > > > Farrukh Imtiaz, M.D. a =E9crit dans le message > > <6i84ii$gt8@chile.earthlink.net>... > > >I have a legal copy of Partition Magic 3.0 CD. I have lost the CDs > > >installation code. Can anyone help me break the code or supply me with > > >one > > Yes, I'll help you. I have a copy of Partition Magic which has > proved worth its weight in gold. For you gold-diggers, I'll send > your names & addresses to PowerQuest Corp., so they can contact you > about getting legal copies. (If your copy were legal, you would > already have called PowerQuest with your name and serial # and they > would have helped you.) o------------------------------------------------------------------- --o | Dr. Peter Gegenheimer | Vox: 785-864-3939 FAX: 785-864-5321 | | Department of Biochemistry, | PGegen@UKans.nospam.edu | | Cell & Molecular Biology | http://RNAworld.Bio.UKans.edu/ | | Department of Botany | | | University of Kansas | | | 2045 Haworth Hall | "The sleep of reason produces | | Lawrence KS 66045-2106 | monsters." Goya | o_____________________________|_____________________________________ __o From owner-software@net.bio.net Fri May 08 23:00:00 1998 Path: biosci!rutgers!rockyd.rockefeller.edu!newsfeed.nyu.edu!news.idt.net!newsfeed.internetmci.com!199.0.154.208!ais.net!uunet!in2.uu.net!venus.hkstar.com!not-for-mail From: Jupiter Mak Newsgroups: alt.collecting.stamps.software,alt.comp.software,alt.comp.software.easter-eggs,alt.comp.software.tools,alt.fan.dean-stark.software,alt.fan.dean-stark.software.tester,alt.fan.soft-targets,alt.med.software,bionet.software,bionet.software.acedb,bio Subject: Re: Easter eggs Date: Sat, 09 May 1998 23:41:29 +0800 Organization: Hong Kong Star Internet Ltd. Lines: 15 Message-ID: <35547929.AF36FCCD@hkstar.com> References: <01bd75f6$4ef18e60$70f352ca@default> <01bd786f$69b1b9c0$224bedc1@steve> <6ithap$4r7$1@front6.grolier.fr> <355344e9.9519275@192.168.0.1> NNTP-Posting-Host: 202.82.49.153 Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.05 [en] (Win95; I) Xref: biosci bionet.software:21023 bionet.software.acedb:1751 Dear everybody, I can't believe my eyes! Where is the Easter eggs? Is here not the Easter-eggs group? Serial number? If you got the legal copy, I don't believe the program not work and, I also don't believe you will not talk to the people who sold this product to you! Going to make the funny joke on us? Think again! By the way, will the webmaster change the group name to "alt.comp.software.pirate" or "alt.comp.software.advertisement.board" later? Just please don't fool me by the word of "easter.eggs", thank you! From owner-software@net.bio.net Fri May 08 23:00:00 1998 Path: biosci!OS.COM!bulseco From: bulseco@OS.COM (Dylan Bulseco) Newsgroups: bionet.software Subject: HMS Beagle Software Reviews Date: 9 May 1998 14:17:16 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 51 Sender: daemon@net.bio.net Distribution: world Message-ID: <3.0.5.32.19980509171655.008607a0@os.com> NNTP-Posting-Host: net.bio.net I am the Software Editor for HMS Beagle (http://hmsbeagle.com), a webzine for biomedical researchers. I am looking for "working scientists" that are interested in writing reviews of scientific software. HMS Beagle pays for these reviews, and if we are able to provide the software, you also get to keep the package. If you are interested, please send me email (bulseco@os.com) for more details. Basically, the questions that I will ask you are: 1. who you are? 2. what you do (e.g. graduate student?, post-doc, undergrad?, faculty?)? 3. what software package you are interested in reviewing (check out our archives to see recent reviews)? 4. can you provide a writing sample? NOTE: To read the reviews, FREE membership to BioMedNet is required. It takes a few minutes to fill out the info, but membership is complete FREE! ALSO: by 'working' scientist, I just prefer scientists that are (or were) actively doing research, teaching etc. Here are the relevant URLs: HMS Beagle: http://hmsbeagle.com BioMedNet: http://biomednet.com Software archives can be seen at: http://biomednet.com/hmsbeagle/tools/archives.htm#sreview -or- if you don't want to spend the time to register now, but want to see a list of the reviews covered (this list is not up to date, but covers all reviews through 1997), you can go to: http://home.os.com/~bulseco/sreview.html#anchor882170 Thanks, Dylan A. Bulseco, Ph.D. Software Editor, HMS Beagle ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ *Dylan A. Bulseco, Ph.D. | bulseco@os.com * *Department of Pharmacology | bulseco@sci.wfbr.edu * *UMASS Medical School, Worcester Found. | http://hmsbeagle.com * *222 Maple Ave, Shrewsbury, MA 01545 | www.wfbr.edu/~bulseco * ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ From owner-software@net.bio.net Fri May 08 23:00:00 1998 From: "Ràtten" Newsgroups: alt.comp.software,alt.comp.software.financial,alt.comp.software.financial.peachtree,alt.comp.software.tools,alt.geo-software,alt.med.software,bionet.software,bionet.software.acedb,ab.software.developers,alt.binaries.w-software References: <353EDEEE.2814A17E@idirect.com> <6i84ii$gt8@chile.earthlink.net> <6i9ecg$ppv$1@news3.isdnet.net> <7opiGDf98QgB-pn2-pfdfdv1Vdndd@rnaworld.bio.ukans.edu> <6ik78e$8kl@suriname.earthlink.net> <7opiGDf98QgB-pn2-9dMxEPN5nc6n@rnaworld.bio.ukans.edu> Subject: Re: S/N Partition Magic needed Date: Sat, 9 May 1998 19:01:27 +0200 Lines: 6 X-Newsreader: Microsoft Outlook Express 4.72.2106.4 X-MimeOLE: Produced By Microsoft MimeOLE V4.72.2106.4 NNTP-Posting-Host: t3o208p51.telia.com X-NNTP-Posting-Host: t3o208p51.telia.com Message-ID: <35548c2b.0@d2o208.telia.com> X-Complaints-To: abuse@i.telia.no Path: biosci!bcm.tmc.edu!news.msfc.nasa.gov!europa.clark.net!206.229.87.25!news-peer.sprintlink.net!news-backup-east.sprintlink.net!news-pen-1.sprintlink.net!news.sprintlink.net!newsfeed1.swip.net!masternews.telia.net!newsfeed50.telia.com!d2o208.telia.com!t3o208p51.telia.com Xref: biosci bionet.software:21024 bionet.software.acedb:1752 Here ya go. Partition Magic v3.0 : s/n: PM300EMU-032011 With great thanks to Ràtten. From owner-software@net.bio.net Sat May 09 23:00:00 1998 Path: biosci!MS.KMB.AC.CN!ypzhang From: ypzhang@MS.KMB.AC.CN (Haipeng Li) Newsgroups: bionet.software Subject: Primer Design Software Date: 9 May 1998 21:10:35 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 17 Sender: daemon@net.bio.net Distribution: world Message-ID: <3.0.32.19980510122042.00693eb4@ms.kmb.ac.cn> NNTP-Posting-Host: net.bio.net Dear Sir/Madam, Do you know where I can get the primer disign software based on multi-sequences? Thanks in advance, Haipeng Li ==================================== Lab of Cellular and Molecular Evolution Kunming Institute of Zoology Kunming, 650223 P. R. China E-mail: ypzhang@ms.kmb.ac.cn From owner-software@net.bio.net Sat May 09 23:00:00 1998 Path: biosci!agate!howland.erols.net!europa.clark.net!164.67.42.145!awabi.library.ucla.edu!137.82.194.1!unixg.ubc.ca!kowalski From: kowalski@unixg.ubc.ca (Paul Edward Kowalski) Newsgroups: bionet.software Subject: Re: RNA secondary structures. Date: 10 May 1998 16:58:21 GMT Organization: University of British Columbia, Vancouver, B.C., Canada Lines: 22 Message-ID: <6j4mbd$hie$1@nntp.ucs.ubc.ca> References: <35530CED.7743@lg.ehu.es> NNTP-Posting-Host: netinfo1.ubc.ca X-Newsreader: TIN [version 1.2 PL2] Both RNAStructure and RNAdraw are good. You can get 'em at : http://rnadraw.base8.se/ http://pundit.colorado.edu:8080/ Good luck. Kowalski Asier Fullaondo Elordui-Zapaterietxe (gvpfuela@lg.ehu.es) wrote: : Hi there: : Does anyone know any good program to design ready-to-publish : RNA structures. I use mfold of the GCG package and also som web-sites to : get my secondary structures but I have not any program to edit this : outputs. : Thank you in advance, : Oskar Fdz-Capetillo Ruiz From owner-software@net.bio.net Sat May 09 23:00:00 1998 Path: biosci!rutgers!rockyd.rockefeller.edu!news-nysernet-16.sprintlink.net!206.229.87.26!news-east.sprintlink.net!news-peer.sprintlink.net!news.sprintlink.net!newsfeed.direct.ca!news.bctel.net!newsfeed.smartt.com!not-for-mail From: larry@nonam.com (Larry ) Newsgroups: alt.collecting.stamps.software,alt.comp.software,alt.comp.software.easter-eggs,alt.comp.software.tools,alt.fan.dean-stark.software,alt.fan.dean-stark.software.tester,alt.fan.soft-targets,alt.med.software,bionet.software,bionet.software.acedb,bio Subject: Re: Easter eggs Date: Sun, 10 May 1998 00:42:26 GMT Organization: KTK Communications Ltd. (SmarttNet, http://www.smartt.com) Lines: 31 Message-ID: <3554f7aa.2638239@192.168.0.1> References: <01bd75f6$4ef18e60$70f352ca@default> <01bd786f$69b1b9c0$224bedc1@steve> <6ithap$4r7$1@front6.grolier.fr> <355344e9.9519275@192.168.0.1> <35547929.AF36FCCD@hkstar.com> NNTP-Posting-Host: burn-mx01016.smartt.com Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Newsreader: Forte Agent 1.5/32.451 Xref: biosci bionet.software:21026 bionet.software.acedb:1753 Hi: Glad you collect Easter eggs. We collect stamps! Maybe we could join forces and steal software and give it to what's-his-face here. Then everybody would be happy! Larru On Sat, 09 May 1998 23:41:29 +0800, Jupiter Mak wrote: >Dear everybody, > >I can't believe my eyes! Where is the Easter eggs? Is here not the >Easter-eggs group? > >Serial number? If you got the legal copy, I don't believe the program >not work and, I also don't believe you will not talk to the people who >sold this product to you! Going to make the funny joke on us? Think >again! > >By the way, will the webmaster change the group name to >"alt.comp.software.pirate" or "alt.comp.software.advertisement.board" >later? > >Just please don't fool me by the word of "easter.eggs", thank you! From owner-software@net.bio.net Sun May 10 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!newshub.northeast.verio.net!nntp.upenn.edu!not-for-mail From: krzyszto@mail.med.upenn.edu Newsgroups: bionet.software Subject: Fetal Echo Expert System Date: Mon, 11 May 1998 04:59:51 GMT Organization: University of Pennsylvania Lines: 8 Message-ID: <355685b6.144707113@netnews.upenn.edu> Reply-To: krzyszto@mail.med.upenn.edu NNTP-Posting-Host: dialin0581.upenn.edu X-Newsreader: Forte Free Agent 1.11/32.235 Fetal Echocardiography Homepage located at the URL http://www.med.upenn.edu/fetus contains the largest free library of fetal heart images. Over 100 high quality ultrasound images obtained using different ultrasound techniques: 2D-echo, Color Doppler, M-mode, and Pulse Doppler.The Homepage contains also links to other sites related to fetal ultrasound, cardiology, radiology, and telemedicine. All comments, questions. and suggestions are welcome. From owner-software@net.bio.net Sun May 10 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cam-news-feed3.bbnplanet.com!news.bbnplanet.com!nntp.inc.net!news.inc.net!not-for-mail From: elja.inc@mixcom.com (Mike McWhinney) Newsgroups: bionet.software Subject: Re: ABI DNA sequence software for PC's? Date: Mon, 11 May 1998 19:08:16 GMT Organization: Inc.Net http://www.inc.net Lines: 21 Message-ID: <35594be6.15581760@news.mixcom.com> References: <3556CD0E.1D134732@bbsrc.ac.uk> NNTP-Posting-Host: dial192-4.mixcom.com Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Newsreader: Forte Agent 1.0/16.390 Duncan Gaskin wrote: >Does anyone know of a program running under Windows that will allow >multiple sequence files generated by ABI instruments to be examined and >edited in the same way as the Mac program SeqEd from Perkin Elmer/ABI. > >Dr Duncan Gaskin >duncan.gaskin@bbsrc.ac.uk Dr. Gaskin, I would contact ABI/Perkin Elmer regarding that. There have been many people in seeing the Mac sequencing analysis software ported over to the Wintel world. Check their website also. I forget the address. It might be: www.perkin-elmer.com/ab/index.htm Good luck!! Mike McWhinney From owner-software@net.bio.net Sun May 10 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!portc02.blue.aol.com!howland.erols.net!usc!usc!not-for-mail From: mtkim@hsc.usc.edu (mtkim) Newsgroups: bionet.software Subject: Wanted: Biology Clip Date: 11 May 1998 13:47:51 -0700 Organization: University of Southern California, Los Angeles, CA Lines: 7 Message-ID: <6j7o5n$k9h$1@hsc.usc.edu> NNTP-Posting-Host: hsc.usc.edu hello...i am looking for a web site where i can download some clip arts. if you know of any, please email me at this address. thank you mike kim From owner-software@net.bio.net Sun May 10 23:00:00 1998 Path: biosci!agate!howland.erols.net!newsfeed.nacamar.de!nntp.news.xara.net!xara.net!server5.netnews.ja.net!server3.netnews.ja.net!is.bbsrc.ac.uk!news From: michael.baron@deletethis.bbsrc.ac.uk Newsgroups: bionet.software Subject: Re: publication-quality protein alignments Date: Mon, 11 May 1998 08:51:28 +0100 Organization: BBSRC Biotechnology and Biological Sciences Research Council Lines: 10 Message-ID: <3556AE00.6AA0@deletethis.bbsrc.ac.uk> References: <6ivni1$1t9$1@nntp1.uunet.ca> NNTP-Posting-Host: pc0258.avri.bbsrc.ac.uk Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 3.0 (Win95; I) Victor Graziano wrote: > > Try the Protein Manager demo available from www.acdlabs.com. Well, except that the original request was for Mac or Web-based programs, and the Protein Manager is a Wintel-only application. cheers, Michael From owner-software@net.bio.net Sun May 10 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!news.maxwell.syr.edu!nntp.news.xara.net!xara.net!server5.netnews.ja.net!server3.netnews.ja.net!is.bbsrc.ac.uk!news From: Duncan Gaskin Newsgroups: bionet.software Subject: ABI DNA sequence software for PC's? Date: Mon, 11 May 1998 11:03:58 +0100 Organization: BBSRC Biotechnology and Biological Sciences Research Council Lines: 6 Message-ID: <3556CD0E.1D134732@bbsrc.ac.uk> NNTP-Posting-Host: pc0749.ifrr.bbsrc.ac.uk Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.04 [en] (WinNT; I) Does anyone know of a program running under Windows that will allow multiple sequence files generated by ABI instruments to be examined and edited in the same way as the Mac program SeqEd from Perkin Elmer/ABI. Dr Duncan Gaskin duncan.gaskin@bbsrc.ac.uk From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!rutgers!rockyd.rockefeller.edu!newsfeed.nyu.edu!news.idt.net!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!newsfeed.internetmci.com!199.0.154.208!ais.net!uunet!in2.uu.net!not-for-mail From: Colette Young Newsgroups: chi.jobs,comp.unix.solaris,comp.client-server,comp.databases,comp.infosystems,comp.software-eng,comp.unix.misc,ia.comp.infosystems.misc,in.jobs,mi.jobs,milw.jobs,comp.databases.oracle.marketplace,bionet.software,bit.listserv.aix-l,comp.ai.shells Subject: Chicago--Unix Systems and Network Adminnistrator Date: Tue, 12 May 1998 14:28:51 -0700 Organization: Encyclopaedia Britannica Lines: 67 Message-ID: <3558BF13.3672F23@eb.com> Reply-To: cyoung@eb.com NNTP-Posting-Host: tis.eb.com Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.04 [en] (Win95; I) X-Priority: 2 (High) Job Description for Principal Systems Administrator (Unix) Description--Play an integral role in facilitating both New Product Development teams and our business-functional teams. Duties include, but are not limited to: ? Design and administer UNIX systems supporting our commercial web sites. ? Support and administer development and editorial communities within Encyclopaedia ? Britannica. ? Improve and maintain our building-wide and worldwide communications facilities. ? Respond to internal and external user requests and problems. ? Lead projects and manage personnel as unexpected contingencies arise. Summary of Qualifications ? Education and training requirements include Bachelor of Science in a science or engineering discipline. Must have at least 5 years experience performing in role of Systems Administrator, as well as a minimum of two years as a Team or Project Leader. Skills and knowledge requirements include: ? Five or more years experience in UNIX and LAN/WAN administration. ? RDBMS experience is preferred, but not required. ? Two or more years of Project Management experience is required. ? Experience in designing, implementing, and maintaining UNIX system administration, Web Server administration, network architectural design, and LAN/WAN administration. ? Experience in e-mail maintenance and expertise in the creation and implementation of firewalls is highly desired.). Technical Experience Required: Operating System: Sun OS/Unix, NT, Netware. Network Comnmunication Protocols: IPX, TCP/IP, NET BEUI, NET BIOS. CISCO Routers, bridges and hubs. LAN/WAN, Web Server Administration, Network Architecture. Soft Skills Required: Project Management experience. Excellent oral, written, and interpersonal communication skills. Desired Skills: RDBMS, Netscape Web Server, NT, Firewalls, C/C++ programming. Contact: Colette Young cyoung@eb.com Encyclopaedia Britannica Phone: (312) 347-7361 Fax: (312) 294-2176 From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!agate!logbridge.uoregon.edu!feed2.news.erols.com!erols!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!newsxfer3.itd.umich.edu!rill.news.pipex.net!pipex!server1.netnews.ja.net!hgmp.mrc.ac.uk!not-for-mail From: Michele Clamp Newsgroups: bionet.software Subject: Re: publication-quality protein alignments Date: 12 May 1998 15:23:00 +0100 Organization: MRC Human Genome Mapping Project Resource Centre Lines: 44 Message-ID: References: <354E208A.AF43F945@nih.gov> <354EEFF9.1394@sanger.ac.uk> NNTP-Posting-Host: speed.ebi.ac.uk X-Newsreader: Gnus v5.5/Emacs 20.2 Ewan Birney writes: > Jonathan Epstein wrote: > > > > I am looking for some software to produce attractive proteins alignments > > suitable for publication. It possible, this software should run on a > > Macintosh or a Web-based platform. > > > > Hmmm. There is a non-obvious set of choices - including > > Seaview (biom3.univ-lyon1.fr - ftp - unix) > alscript (-C program - makes ps. barton.ebi.ac.uk) > genedoc (windows NT) > belvu (I like it... ftp://ncbi.nlm.nih.gov/pub/esr/ - unix) > > As for pure Web based ones, I know of one java alignment viewer... > but sadly unreleased yet... ;( Hmm I think he may mean Jalview. No it isn't released yet (soon to be beta) but if some intrepid souls wish to try it out you can have a look at its home page http://circinus.ebi.ac.uk:6543/jalview/ and trial applets are at http://circinus.ebi.ac.uk:6543/jalview/try.html and http://circinus.ebi.ac.uk:6543/jalview/groups.html I don't know if the output will be exactly what you want - postscript is generated and mailed back to you. For real flexibility (but ahem a not overfriendly interface :) alscript does the job. (I should declare an interest here as I work in Geoff Barton's group.) Cheers Michele. -- Dr Michele Clamp , EMBL-European Bioinformatics Institute Hinxton, Cambs CB10 1SD, email : michele@ebi.ac.uk UK Tel: 01223 494682 Fax: 01223 494468 From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!news.Stanford.EDU!Cabal.CESspool!bofh.vszbr.cz!fu-berlin.de!we27pc04.ukbf.fu-berlin.DE!not-for-mail From: "Oliver Politz" Newsgroups: bionet.software Subject: Re: ABI DNA sequence software for PC's? Date: Tue, 12 May 1998 18:10:01 +0200 Organization: Freie Universitaet Berlin Lines: 19 Message-ID: <6j9scg$cjr$1@fu-berlin.de> References: <3556CD0E.1D134732@bbsrc.ac.uk> NNTP-Posting-Host: we27pc04.ukbf.fu-berlin.de (160.45.184.205) Mime-Version: 1.0 Content-Type: text/plain; charset=iso-8859-1 Content-Transfer-Encoding: 8bit X-Access: 16 17 19 X-Trace: fu-berlin.de 894989520 12923 (none) 160.45.184.205 X-Newsreader: Microsoft Outlook Express 4.72.2106.4 X-MimeOLE: Produced By Microsoft MimeOLE V4.72.2106.4 Duncan Gaskin schrieb in Nachricht <3556CD0E.1D134732@bbsrc.ac.uk>... >Does anyone know of a program running under Windows that will allow >multiple sequence files generated by ABI instruments to be examined and >edited in the same way as the Mac program SeqEd from Perkin Elmer/ABI. > >Dr Duncan Gaskin >duncan.gaskin@bbsrc.ac.uk There is a program called Geneskipper from the EMBL in Heidelberg which is designed for the A.L.F. Sequencer to do everything in assembling contigs and analysing the sequence in several respects (ORFs, DOT-blots etc.). This program can easily import ABI rawdata files and handle them. It runs under Win3.1 to WinNT but it is not for free. Contact is schwager@embl-heidelberg.de Oliver From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!mips.biochem.mpg.de!frishman From: frishman@mips.biochem.mpg.de (Dmitrij Frishman) Newsgroups: bionet.software Subject: ORPHEUS: bacterial gene prediction Date: 12 May 1998 04:13:00 -0700 Organization: Max-Planck-Institute for Biochemistry Lines: 32 Sender: daemon@net.bio.net Distribution: world Message-ID: <35582E2C.41C6@mips.biochem.mpg.de> NNTP-Posting-Host: net.bio.net We are pleased to announce the availability of a new bacterial gene prediction program ORPHEUS: http://pedant.mips.biochem.mpg.de/frishman/orpheus_home.html ORPHEUS is a software system for gene prediction in complete bacterial genomes and large genomic fragments. The analysis starts with database similarity search and identification of reliable gene fragments. The latter are used to derive statistical characteristics of protein-coding regions and ribosome-binding sites. At the final step, the complete set of genes in the analyzed genome is predicted, with special attention paid to correct gene start identification. All analysis steps are fully automated. Detailed description of ORPHEUS has been published in the following paper: Frishman, D. (*), Mironov, A. (**), Mewes, H.-W. (*), and Gelfand, M.(***) (1998). Combining diverse evidence for gene recognition in completely sequenced bacterial genomes. Nucl. Acids Res., in press. (*) Munich Information Center for Protein Sequences (MIPS) of the German National Center for Health and Environment (GSF), Am Klopferspitz 18a, 82152 Martinsried, Germany (**) Laboratory of Mathematical Methods, National Center for Biotechnology Information NIIGENETIKA, Moscow, 113545, Russia (***) Institute of Protein Research, Russian Academy of Sciences, Pushchino, 142292, Russia. From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!news.maxwell.syr.edu!intgwpad.nntp.telstra.net!nsw.nntp.telstra.net!storia.ccf.health.nsw.gov.au!hd@ccf.health.nsw.gov.au From: Wayne Bolton Newsgroups: bionet.software Subject: Re: ABI DNA sequence software for PC's? Date: Tue, 12 May 1998 16:25:16 +1000 Organization: ARCBS NSW Lines: 39 Message-ID: <3557EB4B.7839@arcbs.redcross.org.au> References: <19980512003507.9951.rocketmail@send1d.yahoomail.com> Reply-To: wbolton@arcbs.redcross.org.au NNTP-Posting-Host: 203.5.28.201 Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 3.01 (Win95; I) Peter Hufnagel wrote: > > Perkin Elmer offers "AbiView" as freeware for Windows. This program > allows you to view sequence data, but not to edit them. Quite a > primitive program and very slow also. > I have never heard of an Abi sequence editing software for Dos/Windows > systems. I would bo interested, too. > > regards, > Peter > ***** > > ---Duncan Gaskin wrote: > > > > Does anyone know of a program running under Windows that will allow > > multiple sequence files generated by ABI instruments to be examined > and > > edited in the same way as the Mac program SeqEd from Perkin Elmer/ABI. > > > > Dr Duncan Gaskin > > duncan.gaskin@bbsrc.ac.uk > > > > > > _________________________________________________________ > DO YOU YAHOO!? > Get your free @yahoo.com address at http://mail.yahoo.com There is a program called Chromas written by Conor McCarthy at Griffith University Australia which will read an ABI file and allow editing of sequence it will search, reverse complement and display edited sequence or original - I find it very useful - it is freely available at http://trishul.sci.gu.edu/~connor/chromas.html enjoy -- Wayne Bolton Virology Department Australian Red Cross Blood Service NSW From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!YAHOO.COM!p_hufnagel From: p_hufnagel@YAHOO.COM (Peter Hufnagel) Newsgroups: bionet.software Subject: Re: ABI DNA sequence software for PC's? Date: 11 May 1998 17:41:52 -0700 Organization: BIOSCI International Newsgroups for Molecular Biology Lines: 35 Sender: daemon@net.bio.net Distribution: world Message-ID: <19980512003507.9951.rocketmail@send1d.yahoomail.com> NNTP-Posting-Host: net.bio.net Perkin Elmer offers "AbiView" as freeware for Windows. This program allows you to view sequence data, but not to edit them. Quite a primitive program and very slow also. I have never heard of an Abi sequence editing software for Dos/Windows systems. I would bo interested, too. regards, Peter ***** ---Duncan Gaskin wrote: > > Does anyone know of a program running under Windows that will allow > multiple sequence files generated by ABI instruments to be examined and > edited in the same way as the Mac program SeqEd from Perkin Elmer/ABI. > > Dr Duncan Gaskin > duncan.gaskin@bbsrc.ac.uk > > _________________________________________________________ DO YOU YAHOO!? Get your free @yahoo.com address at http://mail.yahoo.com From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!rutgers!rockyd.rockefeller.edu!newsfeed.nyu.edu!news.idt.net!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!newsfeed.internetmci.com!206.124.0.31!pulsar.dimensional.com!dimensional.com!uunet!in1.uu.net!not-for-mail From: Colette Young Newsgroups: chi.jobs,comp.unix.solaris,comp.client-server,comp.databases,comp.infosystems,comp.software-eng,comp.unix.misc,ia.comp.infosystems.misc,in.jobs,mi.jobs,milw.jobs,comp.databases.oracle.marketplace,bionet.software,bit.listserv.aix-l,comp.ai.shells Subject: Chicago--Unix/C++ Software Engineer--Principal Date: Tue, 12 May 1998 14:25:17 -0700 Organization: Encyclopaedia Britannica Lines: 81 Message-ID: <3558BE3D.DA72ABFE@eb.com> Reply-To: cyoung@eb.com NNTP-Posting-Host: tis.eb.com Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.04 [en] (Win95; I) X-Priority: 2 (High) Principal Middleware / Internet Engineer Encyclopaedia Britannica Encyclopaedia Britannica (EB) is the provider of the world's oldest continuously published and, arguably, most famous reference books. While we may be perceived as a conservative and scholarly organization, the level of excitement here is teeming as our employees share their talents in driving Encyclopaedia Britannica into the 21st Century. Encyclopaedia Britannica, we have been on the cutting edge of "The Information Age" since 1768! Job Description Senior Member of the Online Development Team of engineers responsible for developing software for Encyclopaedia Britannica's (EB) suite of online products. These products currently are: Britannica Internet Guide (www.ebig.com), a unique, proprietary search engine that enables richer, and more refined searches on the Internet, and Britannica On Line (www.eb.com), the Internet equivalent of Encyclopaedia Britannica's print set. It will be the responsibility of Online Development Team Members to architect, design, develop, and implement new online, interactive products, as well as enhance the current products. Duties include, but are not limited to: * Architect the designs of multiple applications which are cooperatively combined to enhance overall functionality. * Responsible for the overall design and coding of the application. * Coordinate resources, schedule assignments, and communications for application development projects. * Assist in the development of project schedules and task assignments for assigned project(s). * Contribute to the development of a standard development process, such that online product quality is assured and measurable. Summary of Qualifications Education and training requirements include a BSCS or equivalent (advanced degree a plus) along with at least 7+ years of software development experience and two years in a team leadership role. Skills and knowledge requirements include: * Experience with formal software development processes and methods for measuring product quality resulting from process. * Software programming in both procedural and object-oriented languages (especially, UNIX, C, C++, SQL). * Comprehensive knowledge and experience using production software tools (compilers, makefiles, defect tracking, version control, etc.). * Experience with relational databases (Informix strongly preferred) and Internet/Web Site development (HTML, CGI, Java, TCL, Perl). Required Skills: Unix, C/C++, Informix (relational database), Java, HTML, CGI Desired Skills: Perl, tcl/tk, awk, sed Soft Skills: Must be able to demonstrate strong project/team leadership skills. Excellent communications skills are required. Full software development life-cycle experience is required. Start Date: ASAP Employment Type: Full-Time Employee (no contract positions available). Pay Rate: Very! Competitive Location: Chicago, IL - 60604 Contact: Encyclopaedia Britannica Colette Young Call: 312-347-7361 Fax: 312-294-2176 E-mail: staffing@eb.com From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!rutgers!rockyd.rockefeller.edu!newsfeed.nyu.edu!news.idt.net!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!Cabal.CESspool!bofh.vszbr.cz!newsfeed.pop.de!uunet!in3.uu.net!not-for-mail From: Colette Young Newsgroups: chi.jobs,comp.unix.solaris,comp.client-server,comp.databases,comp.infosystems,comp.software-eng,comp.unix.misc,ia.comp.infosystems.misc,in.jobs,mi.jobs,milw.jobs,comp.databases.oracle.marketplace,bionet.software,bit.listserv.aix-l,comp.ai.shells Subject: Chicago--Unix/C++ Middleware Software Engineer (Senior) Date: Tue, 12 May 1998 14:24:12 -0700 Organization: Encyclopaedia Britannica Lines: 78 Message-ID: <3558BDFC.307E1C6F@eb.com> Reply-To: cyoung@eb.com NNTP-Posting-Host: tis.eb.com Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.04 [en] (Win95; I) X-Priority: 2 (High) UNIX / C++ Middleware Software Engineer (Senior) Encyclopaedia Britannica (EB) is the provider of the world's oldest continuously published and, arguably, most famous reference books. While we may be perceived as a conservative and scholarly organization, the level of excitement here is teeming as our employees share their talents in driving Encyclopaedia Britannica into the 21st Century. Encyclopaedia Britannica, we have been on the cutting edge of "The Information Age" since 1768! Job Description Senior Member of the Online Development Team of engineers responsible for developing software for Encyclopaedia Britannica's (EB) suite of online products. These products currently are: Britannica Internet Guide (www.ebig.com), a unique, proprietary search engine that enables richer, and more refined searches on the Internet, and Britannica On Line (www.eb.com), the Internet equivalent of Encyclopaedia Britannica's print set. It will be the responsibility of Online Development Team Members to architect, design, develop, and implement new online, interactive products, as well as enhance the current products. Duties include, but are not limited to: * Design and develop complete applications. Applications may consist of multiple-module level software components. * Responsible for the overall design of the assigned module(s), and coding of the application using procedural and object-oriented languages (i.e., C, C++, or Java). * Contribute to the development of a standard development process to assure online product quality and measurability. Summary of Qualifications Education and training requirements include a BSCS or equivalent (advanced degree a plus) along with at least five years of software development experience and two years in a team leadership role. Skills and knowledge requirements include: * Experience with formal software development processes and methods for measuring product quality resulting from process. * Software programming in both procedural and object-oriented languages (especially, UNIX, C, C++, SQL), and procedural script languages (i.e., shell, awk, sed, tcl). * Comprehensive knowledge and experience using production software tools (compilers, makefiles, defect tracking, version control, etc.). * Experience with relational databases (Informix strongly preferred) and Internet/Web Site development (HTML, CGI, Java, TCL, Perl). This position is part of a New Team being formed for New Online/Internet Product Development. Get involved in this exciting work and a ground-floor opportunity for growth and recognition. Contact us Today! Required Skills: Unix, C++, Sun/Solaris, Perl, Java, Shell scripts, SQL Desired Skills: Informix, HTML, awk, sed, CGI Soft Skills: Must have full software development life-cycle experience. Excellent communication skills are required. Start Date: ASAP Employment Type: Full-Time Employee (no contract positions available). Pay Rate: Very! Competitive Location: Chicago, IL - 60604 Contact: Encyclopaedia Britannica Colette Young Call: 312-347-7361 Fax: 312-294-2176 E-mail: staffing@eb.com From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!rutgers!rockyd.rockefeller.edu!newsfeed.nyu.edu!news.idt.net!newspeer.monmouth.com!korova.insync.net!uunet!in2.uu.net!not-for-mail From: Colette Young Newsgroups: chi.jobs,comp.unix.solaris,comp.client-server,comp.databases,comp.infosystems,comp.software-eng,comp.unix.misc,ia.comp.infosystems.misc,in.jobs,mi.jobs,milw.jobs,comp.databases.oracle.marketplace,bionet.software,bit.listserv.aix-l,comp.ai.shells Subject: Chicago--Unix/Internet Middleware Engineer Date: Tue, 12 May 1998 14:18:22 -0700 Organization: Encyclopaedia Britannica Lines: 81 Message-ID: <3558BC9E.E7B94B8E@eb.com> Reply-To: cyoung@eb.com NNTP-Posting-Host: tis.eb.com Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.04 [en] (Win95; I) Internet / Middleware Software Engineer Encyclopaedia Britannica 2 Openings Available! Encyclopaedia Britannica (EB) is the provider of the world's oldest continuously published and, arguably, most famous reference books. While we may be perceived as a conservative and scholarly organization, the level of excitement here is teeming as our employees share their talents in driving Encyclopaedia Britannica into the 21st Century. Encyclopaedia Britannica, we have been on the cutting edge of "The Information Age" since 1768! Job Description Senior Member of the Online Development Team of engineers responsible for developing software for Encyclopaedia Britannica's (EB) suite of online products. These products currently are: Britannica Internet Guide (www.ebig.com), a unique, proprietary search engine that enables richer, and more refined searches on the Internet, and Britannica On Line (www.eb.com), the Internet equivalent of Encyclopaedia Britannica's print set. It will be the responsibility of Online Development Team Members to architect, design, develop, and implement new online, interactive products, as well as enhance the current products. Duties include, but are not limited to: * Design and develop complete applications. Applications may consist of multiple-module level software components. * Responsible for the overall design of the assigned module(s), and coding of the application using procedural and object-oriented languages (i.e., C, C++, or Java). * Contribute to the development of a standard development process to assure online product quality and measurability. Summary of Qualifications Education and training requirements include a BSCS or equivalent (advanced degree a plus) along with at least five years of software development experience and two years in a team leadership role. Skills and knowledge requirements include: * Experience with formal software development processes and methods for measuring product quality resulting from process. * Software programming in both procedural and object-oriented languages (especially, UNIX, C, C++, SQL), and procedural script languages (i.e., shell, awk, sed, tcl). * Comprehensive knowledge and experience using production software tools (compilers, makefiles, defect tracking, version control, etc.). * Experience with relational databases (Informix strongly preferred) and Internet/Web Site development (HTML, CGI, Java, TCL, Perl). This position is part of a New Team being formed for New Online/Internet Product Development. Get involved in this exciting work and a ground-floor opportunity for growth and recognition. Contact us Today! Required Skills: UNIX, C++, SQL Desired Skills: Informix, HTML, Java, Perl, tcl/tk, CGI Soft Skills: Must have full software development life-cycle experience. Excellent communications skills are also required. Start Date: ASAP Employment Type: Full-Time Employee only (no contract positions available. Pay Rate: Very! Competitive Location: Chicago, IL - Loop Contact: Encyclopaedia Britannica Colette Young Call: 312-347-7361 Fax: 312-294-2176 E-mail: staffing@eb.com From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!rutgers!rockyd.rockefeller.edu!newsfeed.nyu.edu!news.idt.net!ix.netcom.com!ais.net!uunet!in2.uu.net!not-for-mail From: Colette Young Newsgroups: chi.jobs,comp.unix.solaris,comp.client-server,comp.databases,comp.infosystems,comp.software-eng,comp.unix.misc,ia.comp.infosystems.misc,in.jobs,mi.jobs,milw.jobs,comp.databases.oracle.marketplace,bionet.software,bit.listserv.aix-l,comp.ai.shells Subject: Informix / Oracle Data Base Administrator Date: Tue, 12 May 1998 14:15:23 -0700 Organization: Encyclopaedia Britannica Lines: 90 Message-ID: <3558BBEB.FB45AC6B@eb.com> Reply-To: cyoung@eb.com NNTP-Posting-Host: tis.eb.com Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.04 [en] (Win95; I) X-Priority: 2 (High) Informix / Oracle Data Base Administrator Encyclopaedia Britannica Job Description Senior Member of the Online Development Team of engineers responsible for developing software for Encyclopaedia Britannica's (EB) suite of online products. These products currently are: Britannica Internet Guide (www.ebig.com), a unique, proprietary search engine that enables richer, and more refined searches on the Internet, and Britannica On Line (www.eb.com), the Internet equivalent of Encyclopaedia Britannica's print set. It will be the responsibility of Online Development Team Members to architect, design, develop, and implement new online, interactive products, as well as enhance the current products. Duties include, but are not limited to: * Works with senior development staff to design overall database architecture. * Works with senior development staff to create and maintain schema design(s). * Responsible for user support and report technology related to the database(s). * Perform and manage the process of data migration. * Perform conceptual and physical database design. * Responsible for the table space management. * Responsible for the database performance and problem resolution. * Responsible for the disaster recovery plan for the database(s). Summary of Qualifications Education and training requirements include a BSCS or equivalent (advanced degree a plus). At least two to five years of experience with physical and logical design of relational databases is required. Skills and knowledge requirements include: * Experience with formal software development processes and methods for measuring product quality resulting from process. * SQL programming. * Stored Procedures (the creation and maintenance). * Experience with Database replication. * Experience with Internet/Web Site development (HTML, CGI, Java, TCL, Perl). * Informix DBA Tools and ERWIN experience would be a definite plus. * Software programming experience (especially, UNIX, C, C++) is a plus. This position is part of a New Team being formed for New Online/Internet Product Development. Get involved in this exciting work and a ground-floor opportunity for growth and recognition. Contact us Today! Required Skills: SQL, Informix (preferred), Unix, C++ Desired Skills: Perl, tcl/tk, ERWIN, HTML, CGI, Perl Soft Skills: Must have experience in both logical and physical design of databases. Excellent communications skills are required. Visit our Job site at: www.chicago.computerjobs.com/BRITANNICA.htm Start Date: ASAP Employment Type: Full-Time Employee (no contract positions available). Pay Rate: Very! Competitive Location: Chicago, IL - 60604 Contact: Encyclopaedia Britannica Colette Young Call: 312-347-7361 Fax: 312-294-2176 E-mail: staffing@eb.com From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!newsfeed.internetmci.com!164.67.42.145!awabi.library.ucla.edu!164.67.80.81!news.ucla.edu!gauss.mbi.ucla.edu!lukasz From: lukasz@mbi.ucla.edu (Lukasz Salwinski) Newsgroups: bionet.molec-model,bionet.software Subject: CHIME-like plugi-in Date: 12 May 1998 16:37:08 GMT Organization: Molecular Biology Institute, UCLA Lines: 10 Message-ID: <6j9trk$is0$1@uni.library.ucla.edu> Reply-To: lukasz@mbi.ucla.edu NNTP-Posting-Host: gauss.mbi.ucla.edu X-newsreader: xrn 9.00 Xref: biosci bionet.molec-model:2109 bionet.software:21041 hi, is there anything like CHIME plug-in (2D/3D molecule display) that runs on DEC alphas ? it's kind if hard to set up a page rendered with it while sitting in front of an alpha box.... MDM (the authors of the plug-in) do not plan to port this thing... sigh... lukasz From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!bcm.tmc.edu!news.msfc.nasa.gov!newsfeed.internetmci.com!206.251.127.50!newsfeed.gte.net!uunet!in4.uu.net!not-for-mail From: Colette Young Newsgroups: bit.listserv.aix-l,comp.ai.shells,bionet.software,comp.databases.oracle.marketplace,wi.general,milw.jobs,mi.jobs,in.jobs,ia.comp.infosystems.misc,comp.unix.misc,comp.software-eng,comp.infosystems,comp.client-server,comp.databases,comp.unix.solaris,chi.jobs Subject: Chicago--Informix/Oracle DBA Date: Tue, 12 May 1998 14:32:50 -0700 Organization: Encyclopaedia Britannica Lines: 94 Message-ID: <3558C001.1CF8181E@eb.com> Reply-To: cyoung@eb.com NNTP-Posting-Host: tis.eb.com Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.04 [en] (Win95; I) X-Priority: 1 (Highest) Informix / Oracle Data Base Administrator Encyclopaedia Britannica Job Description Senior Member of the Online Development Team of engineers responsible for developing software for Encyclopaedia Britannica's (EB) suite of online products. These products currently are: Britannica Internet Guide (www.ebig.com), a unique, proprietary search engine that enables richer, and more refined searches on the Internet, and Britannica On Line (www.eb.com), the Internet equivalent of Encyclopaedia Britannica's print set. It will be the responsibility of Online Development Team Members to architect, design, develop, and implement new online, interactive products, as well as enhance the current products. Duties include, but are not limited to: * Works with senior development staff to design overall database architecture. * Works with senior development staff to create and maintain schema design(s). * Responsible for user support and report technology related to the database(s). * Perform and manage the process of data migration. * Perform conceptual and physical database design. * Responsible for the table space management. * Responsible for the database performance and problem resolution. * Responsible for the disaster recovery plan for the database(s). Summary of Qualifications Education and training requirements include a BSCS or equivalent (advanced degree a plus). At least two to five years of experience with physical and logical design of relational databases is required. Skills and knowledge requirements include: * Experience with formal software development processes and methods for measuring product quality resulting from process. * SQL programming. * Stored Procedures (the creation and maintenance). * Experience with Database replication. * Experience with Internet/Web Site development (HTML, CGI, Java, TCL, Perl). * Informix DBA Tools and ERWIN experience would be a definite plus. * Software programming experience (especially, UNIX, C, C++) is a plus. This position is part of a New Team being formed for New Online/Internet Product Development. Get involved in this exciting work and a ground-floor opportunity for growth and recognition. Contact us Today! Required Skills: SQL, Informix (preferred), Unix, C++ Desired Skills: Perl, tcl/tk, ERWIN, HTML, CGI, Perl Soft Skills: Must have experience in both logical and physical design of databases. Excellent communications skills are required. Visit our Job site at: www.chicago.computerjobs.com/BRITANNICA.htm Start Date: ASAP Employment Type: Full-Time Employee (no contract positions available). Pay Rate: Very! Competitive Location: Chicago, IL - 60604 Contact: Encyclopaedia Britannica Colette Young Call: 312-347-7361 Fax: 312-294-2176 E-mail: staffing@eb.com From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!europa.clark.net!152.158.16.50!newsfeed.uk.ibm.net!sackheads.org!ibm.net!peer.news.u-net.net!u-net!news.u-net.com!not-for-mail From: arnoud@vanvliet.u-net.com (Arnoud van Vliet) Newsgroups: bionet.software Subject: Re: ABI DNA sequence software for PC's? Date: Tue, 12 May 1998 21:46:23 GMT Organization: (Posted Via) U-NET Ltd. Lines: 26 Message-ID: <3558c263.3698793@news.u-net.com> References: <3556CD0E.1D134732@bbsrc.ac.uk> Reply-To: arnoud@vanvliet.u-net.com NNTP-Posting-Host: p122.nas1.is4.u-net.net X-Newsreader: Forte Free Agent 1.1/32.230 Hi Duncan, I can highly recommend Chromas. I find it very useful. You can find it at: http://www.technelysium.com.au/chromas.html Up to version 1.44 it is freeware, the improved version 1.5 is shareware ($75). happy sequencing, Arnoud On Mon, 11 May 1998 11:03:58 +0100, Duncan Gaskin wrote: >Does anyone know of a program running under Windows that will allow >multiple sequence files generated by ABI instruments to be examined and >edited in the same way as the Mac program SeqEd from Perkin Elmer/ABI. > >Dr Duncan Gaskin >duncan.gaskin@bbsrc.ac.uk From owner-software@net.bio.net Mon May 11 23:00:00 1998 Path: biosci!news.Stanford.EDU!su-news-hub1.bbnplanet.com!cpk-news-hub1.bbnplanet.com!news.bbnplanet.com!newspeer.monmouth.com!newsfeed.nyu.edu!newsfeed.sgi.net!pitt.edu!newsfeed.pitt.edu!news From: jmartins@helix.hgen.pitt.edu (Jeremy Martinson) Newsgroups: bionet.software Subject: Re: ABI DNA sequence software for PC's? Date: Tue, 12 May 1998 09:19:36 -0400 Organization: Univ. Pittsburgh Lines: 25 Message-ID: References: <19980512003507.9951.rocketmail@send1d.yahoomail.com> <3557EB4B.7839@arcbs.redcross.org.au> NNTP-Posting-Host: ipx1.gsph.pitt.edu X-Newsreader: Anawave Gravity v2.00 In article <3557EB4B.7839@arcbs.redcross.org.au>, wbolton@arcbs.redcross.org.au says... > > > That link is stale. Chromas' new address is http://www.technelysium.com.au/chromas.html From what I see, it looks like a nice program. Now, does anyone know of a program for Windows95 which can do STR genotyping from ABI gel outputs. If there isn't one for Win95, then a Linux one would be fine. If there isn't one, then I'm going to have to buy myself a Mac to sit alongside my PC....which will give my partner something to laugh at, if nothing else. Jeremy -- Dr Jeremy Martinson * tel 1-412-624-5392 University of Pittsburgh * Department of Human Genetics * fax 1-412-624-3020 Graduate School of Public Health * 130 DeSoto St * email jmartins@helix.hgen.pitt.edu Pittsburgh, PA 15261 * USA * From owner-software@net.bio.net Tue May 12 23:00:00 1998 Path: biosci!agate!arclight.uoregon.edu!news-out.internetmci.com!newsfeed.internetmci.com!195.99.66.215!news-feed1.eu.concert.net!btnet-peer!btnet!nntp.news.xara.net!xara.net!server5.netnews.ja.net!server3.netnews.ja.net!is.bbsrc.ac.uk!news From: Andy Phillips Newsgroups: bionet.software Subject: Re: ABI DNA sequence software for PC's? Date: Wed, 13 May 1998 12:27:46 +0100 Organization: BBSRC, IACR Long Ashton Research Station Lines: 23 Message-ID: <355983B2.BDAC2102@bbsrc.ac.uk> References: <3556CD0E.1D134732@bbsrc.ac.uk> Reply-To: andy.phillips@bbsrc.ac.uk NNTP-Posting-Host: pc0628.lars.bbsrc.ac.uk Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit X-Mailer: Mozilla 4.04 [en] (Win95; I) Duncan Gaskin wrote: > > Does anyone know of a program running under Windows that will allow > multiple sequence files generated by ABI instruments to be examined and > edited in the same way as the Mac program SeqEd from Perkin Elmer/ABI. > > Dr Duncan Gaskin > duncan.gaskin@bbsrc.ac.uk I believe that Sequencher is now out in Win95 format (previously Mac only). SeeCosts megabucks, of course. See the Genecodes website at www.genecodes.com Andy ------------------------------------------------------------------------ Email : andy.phillips@bbsrc.ac.uk : University of Bristol Phone : +44-1275-549257 : IACR Long Ashton Research Station Fax : +44-1275-394281 : Long Ashton, Bristol, BS18 9AF, UK WWW : http://www.lars.bbsrc.ac.uk/plantsci/molbiol/molbiol.html ------------------------------------------------------------------------ From owner-software@net.bio.net Tue May 12 23:00:00 1998 Path: biosci!news.Stanford.EDU!Cabal.CESspool!bofh.vszbr.cz!news.maxwell.syr.edu!news-peer.gip.net!news-dc.gip.net!news.gsl.net!gip.net!duke.telepac.pt!news.telepac.pt!not-for-mail From: "Norb" Newsgroups: bionet.software Subject: US Robotics Date: 13 May 1998 01:28:17 GMT Lines: 5 Message-ID: <01bd7e06$cd89b6e0$aeff41c2@mop56170> NNTP-Posting-Host: 194.65.255.174 X-Newsreader: Microsoft Internet News 4.70.1155 How can I upgrade my USR 33.6 to 56K. When comes V0.90? tnx From owner-software@net.bio.net Tue May 12 23:00:00 1998 Path: biosci!agate!news-spur1.maxwell.syr.edu!news.maxwell.syr.edu!news.mel.connect.com.au!harbinger.cc.monash.edu.au!newshost.carno.net.au!not-for-mail From: JohnA@rsbs-central.anu.edu.au (John Armstrong) Newsgroups: bionet.software Subject: Re: Primer Design Software Date: Wed, 13 May 1998 05:39:15 GMT Lines: 26 Message-ID: <6jbf6d$c18$1@clarion.carno.net.au> References: <3.0.32.19980510122042.00693eb4@ms.kmb.ac.cn> NNTP-Posting-Host: 150.203.38.97 X-Newsreader: Forte Free Agent 1.0.82 ypzhang@MS.KMB.AC.CN (Haipeng Li) wrote: