From owner-bio-srs@hgmp.mrc.ac.uk Thu May 18 11:23:19 2000 Return-Path: Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 110) id A78A417A5D; Thu, 18 May 2000 11:23:18 +0100 (BST) Received: by mercury.hgmp.mrc.ac.uk (Postfix, from userid 6015) id 4867717A5D; Thu, 18 May 2000 11:23:16 +0100 (BST) Received: (from daemon@localhost) by hgmp.mrc.ac.uk (8.9.3/8.9.3) id DAA05506 for bionet-software-srs@net.bio.net; Tue, 16 May 2000 03:47:52 +0100 (BST) To: bionet-software-srs@hgmp.mrc.ac.uk From: ichan@im.ac.cn (Yoshihiro Ichiyanagi) Newsgroups: bionet.software.srs Subject: Index file less than 2G on Linux Organization: BIOSCI/MRC Human Genome Mapping Project Resource Centre Message-ID: <3920B5A4.119811C@im.ac.cn> MIME-Version: 1.0 Content-Type: text/plain; charset=iso-2022-jp Content-Transfer-Encoding: 7bit X-Received: from mail.im.ac.cn ([159.226.80.20]) by hgmp.mrc.ac.uk (8.9.3/8.9.3) with SMTP id DAA05486 for ; Tue, 16 May 2000 03:47:44 +0100 (BST) X-Received: (qmail 23409 invoked from network); 16 May 2000 02:44:32 -0000 X-Received: from unknown (HELO im.ac.cn) (ichan@159.226.80.14) by 159.226.80.20 with SMTP; 16 May 2000 02:44:32 -0000 X-Mailer: Mozilla 4.7C-ja [muriyari-ja] (X11; I; Linux 2.2.12-32 i686) X-Accept-Language: ja, en X-To: bio-srs@hgmp.mrc.ac.uk Date: Thu, 18 May 2000 11:23:16 +0100 (BST) Sender: owner-bio-srs@hgmp.mrc.ac.uk Precedence: bulk Hi, We use SRS6 on Linux for DDBJ, which includes daily updated files. I made indices for it. These became nearly 1.7G as a maximum size. On linux(ext2) each one file was treated until 2G. I knew SRS6 has a function, which can do parallel indexing. I tried using "parallelType:fileSize partSizeKb:500000" in ddbj.i file. It created indices with parallel, however, at last it put partial indices together. Does anyone achieve the same as our aim, which we want to control indices separetely less than 2G on Linux, even though database source files will be larger and larger in near future. Best wishes, ichan ---