From owner-rapd@net.bio.net Mon Oct 02 23:00:00 1995
Path: biosci!bcm.tmc.edu!cs.utexas.edu!howland.reston.ans.net!news.starnet.net!wupost!nic.smsu.edu!newsdist.tc.umn.edu!alpha.mrs.umn.edu!markvo@cda.mrs.umn.edu
From: "Christopher T. Cole" <colect@caa.mrs.umn.edu>
Newsgroups: bionet.molbio.rapd
Subject: Re: DNA Quantitation
Date: Mon, 2 Oct 95 11:53:00 CDT
Organization: University of Minnesota - Morris
Lines: 35
Message-ID: <55623.colect@caa.mrs.umn.edu>
Reply-To: <colect@caa.mrs.umn.edu>
NNTP-Posting-Host: sci242-cc.mrs.umn.edu
X-Minuet-Version: Minuet1.0_Beta_17A
X-POPMail-Charset: English
To: rzebell@sfsu.edu

On 19 Sep 1995 17:40:13 GMT, 
Randy K. Zebell  <rzebell@sfsu.edu> wrote:

>Does anyone have an opinion about Hoefer Scientific Instrument's DyNA
>Quant 200 flourometer?  Given our small lab, it seems appropriate for
>rapidly quantifying DNA without the added size and expense of a
>spectrophotometer.  I'm wondering how accurate and reliable the instrument
>is in practice.
>
Mr. Zebell:

we have been using one of these during the last couple months and are quite 
happy with it.  We measure genomic (plant) DNA preps, typically in the 
range of 2-400 ng in a 2 ml cuvette.  We also have the little adapter to 
read samples in capillary tubes but that has not proven practical or 
(fortunately) necessary.  I have not tried their special mirrored cuvette 
for reading extraordinarily tiny amounts of DNA.  Our readings are quite 
consistent from one day to another.  On the other hand, we find that the 
excitation curve is more non-linear than we expected.   For example, if we 
read that a solution is 200 ng/ml, and want to dilute it down to 10 ng/ml, 
we have to apply an empirically derived multiplier to get the correct 
dilution.  We have not played around with this enough to determine the 
cause (mainly because we do not have sufficiently accurate alternative ways 
of measuring DNA concentration, since spec. is influenced by RNA present 
and our store-bought standards have prokayotic AT/GC compositions).

The machine could not be easier or quicker to use.  I leave it in the hands 
of undergraduates for days, and they produce good results.

A spec would have a lot more flexibility, if you wanted it.

Good luck.

--Chris Cole


From owner-rapd@net.bio.net Tue Oct 03 23:00:00 1995
Path: biosci!bath.ac.uk!J.J.Dooley
From: J.J.Dooley@bath.ac.uk (J J Dooley)
Newsgroups: bionet.molbio.rapd
Subject: membership
Date: 4 Oct 1995 14:33:06 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 7
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <9510040928.aa26074@ss1.bath.ac.uk>
NNTP-Posting-Host: net.bio.net

Dear Sir,
could you tell me how I could get registered to
recieve mail from the RAPD noticeboard

many thanks

john dooley

From owner-rapd@net.bio.net Thu Oct 05 23:00:00 1995
Path: biosci!bcm.tmc.edu!cs.utexas.edu!howland.reston.ans.net!news.sprintlink.net!simtel!swidir.switch.ch!scsing.switch.ch!news.belwue.de!fu-berlin.de!bbadd.dialup.fu-berlin.DE!not-for-mail
From: bbadd@zedat.fu-berlin.de ()
Newsgroups: bionet.molbio.methds-reagnts,bionet.molbio.rapd
Subject: RAPD and capillary electrophoresis
Date: Sat, 07 Oct 1995 03:47:51 GMT
Organization: Freie Universitaet Berlin
Lines: 11
Message-ID: <4540u2$954@fu-berlin.de>
NNTP-Posting-Host: bbadd.dialup.fu-berlin.de (160.45.218.83)
X-Access: 16 17 19
X-Newsreader: Forte Free Agent v0.46
Xref: biosci bionet.molbio.methds-reagnts:34554 bionet.molbio.rapd:1312

Hey all,
have anyone experience with the use of capillary electrophoresis for
separation and detection of RAPD fragments? How time consuming and
reproducible is that?
Thanks for all answers; With greetings from Berlin
Olaf

                                                        ,,,                
                                                       (o o) 
---------------------------------------------------oOO--(_)--OOo------------


From owner-rapd@net.bio.net Mon Oct 09 23:00:00 1995
Path: biosci!bcm.tmc.edu!pendragon.jsc.nasa.gov!news.msfc.nasa.gov!newsfeed.internetmci.com!info.ucla.edu!news.ucdavis.edu!jerome.ucdavis.edu!user
From: jfrigot@ucdavis.edu (Jerome Rigot)
Newsgroups: bionet.molbio.rapd
Subject: Reliable soil DNA extraction method
Date: 10 Oct 1995 18:27:33 GMT
Organization: UCDavis
Lines: 15
Message-ID: <jfrigot-1010951130190001@jerome.ucdavis.edu>
NNTP-Posting-Host: jerome.ucdavis.edu

Hello,

I am looking for a reliable soil DNA extraction method that would deal
with the interference problems due to humic acids.  Are there methods that
would be specific to filamentous fungi DNA?

Thanks for your help,

-- 
Jerome Rigot
Dept. Environmental Toxicology
University of California
Davis, CA 95616
(916)752-5896
e-mail: jfrigot@ucdavis.edu

From owner-rapd@net.bio.net Mon Oct 09 23:00:00 1995
Path: biosci!DOC.MEDIC.MIE-U.AC.JP!h-makoto
From: h-makoto@DOC.MEDIC.MIE-U.AC.JP (Makoto Hirai)
Newsgroups: bionet.molbio.rapd
Subject: (none)
Date: 10 Oct 1995 06:01:32 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 13
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <199510101301.WAA17522@doc.medic.mie-u.ac.jp>
NNTP-Posting-Host: net.bio.net

unsubscribe to rapd
***************************
 Makoto Hirai
 Department of Medical zoology
 School of Medicine
 Mie Univ
 Edobashi 2-174, Tsu, 514, Japan

 E-mail: h-makoto@doc.medic.mie-u.ac.jp
 TEL: 0592-33-2692
 FAX: 0592-33-2692
***************************


From owner-rapd@net.bio.net Tue Oct 10 23:00:00 1995
Path: biosci!ml.csiro.au!Chris.Bolch
From: Chris.Bolch@ml.csiro.au (Christopher Bolch)
Newsgroups: bionet.molbio.rapd
Subject: Garbage postings
Date: 11 Oct 1995 16:23:00 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 43
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <199510112321.KAA10681@aqueous.ml.csiro.au>
NNTP-Posting-Host: net.bio.net

Dear RAPD subscribers,

I have been bombarded by a lot of "junk e-mail" from this list over the
past few weeks.  It culminated this morning with 5 posts from an  elena
foshay.  What is really irritating is that the return addresses appear to
be bogus so that I can't even get the satisfaction of telling to sod-off.
I'm sure that most of you are just as pissed off as I am by this.

I am now seriously considering unsubscribing from what is a very good,
active discussion group. This the only way I can see of temporarily keeping
the CR..P out of our site at Hobart.

This type of activity will eventually kill groups like this if it gets
unmanageable.

If anyone has any ideas on how to combat this rising incidence of chain
letters and other irrelevent drivel let me know.

Chris


________________________________________
Any views, statements of intent, or comment in this letter
have no official status and do not constitute or imply any
contract with myself or my employer.
________________________________________
Christopher J. S. Bolch,
Algal Ecologist/Geneticist,
CSIRO Division of Fisheries,
GPO Box 1538,
Hobart, Tasmania,
Australia, 7001.

Australia
PH. 002 325314
FAX 002-325000

International
PH.  061-02-325314
FAX. 061-02-325000
________________________________________



From owner-rapd@net.bio.net Tue Oct 10 23:00:00 1995
Path: biosci!bcm.tmc.edu!news.msfc.nasa.gov!newsfeed.internetmci.com!chi-news.cic.net!simtel!zombie.ncsc.mil!cs.umd.edu!haven.umd.edu!purdue!news.bu.edu!transfer.stratus.com!news3.near.net!yale!news.ycc.yale.edu!news
From: Greg Fitzgerald <gregory.fitzgerald@yale.edu>
Newsgroups: bionet.molbio.hiv,bionet.molbio.methds-reagnts,bionet.molbio.molluscs,bionet.molbio.proteins,bionet.molbio.rapd
Subject: Re: Make a $1,000,000 in 90 Days!
Date: 11 Oct 1995 16:58:50 GMT
Organization: Yale University Biology Department
Lines: 3
Message-ID: <45gt4a$flf@news.ycc.yale.edu>
References: <45ge3g$o1j$5@mhafn.production.compuserve.com>
NNTP-Posting-Host: 130.132.107.28
Mime-Version: 1.0
Content-Type: text/plain; charset=us-ascii
Content-Transfer-Encoding: 7bit
X-Mailer: Mozilla 1.1N (Macintosh; I; 68K)
To: 102771.3337@CompuServe.COM
X-URL: news:45ge3g$o1j$5@mhafn.production.compuserve.com
Xref: biosci bionet.molbio.hiv:1675 bionet.molbio.methds-reagnts:34741 bionet.molbio.molluscs:172 bionet.molbio.proteins:5905 bionet.molbio.rapd:1324

Get out of this site you fool!



From owner-rapd@net.bio.net Tue Oct 10 23:00:00 1995
Path: biosci!bcm.tmc.edu!news.msfc.nasa.gov!newsfeed.internetmci.com!chi-news.cic.net!simtel!zombie.ncsc.mil!cs.umd.edu!haven.umd.edu!purdue!news.bu.edu!transfer.stratus.com!news3.near.net!yale!news.ycc.yale.edu!news
From: Greg Fitzgerald <gregory.fitzgerald@yale.edu>
Newsgroups: bionet.molbio.hiv,bionet.molbio.methds-reagnts,bionet.molbio.molluscs,bionet.molbio.proteins,bionet.molbio.rapd
Subject: Re: Make a $1,000,000 in 90 Days!
Date: 11 Oct 1995 16:58:39 GMT
Organization: Yale University Biology Department
Lines: 3
Message-ID: <45gt3v$flf@news.ycc.yale.edu>
References: <45ge3g$o1j$5@mhafn.production.compuserve.com>
NNTP-Posting-Host: 130.132.107.28
Mime-Version: 1.0
Content-Type: text/plain; charset=us-ascii
Content-Transfer-Encoding: 7bit
X-Mailer: Mozilla 1.1N (Macintosh; I; 68K)
To: 102771.3337@CompuServe.COM
X-URL: news:45ge3g$o1j$5@mhafn.production.compuserve.com
Xref: biosci bionet.molbio.hiv:1674 bionet.molbio.methds-reagnts:34740 bionet.molbio.molluscs:171 bionet.molbio.proteins:5904 bionet.molbio.rapd:1323

Get out of this site you fool!



From owner-rapd@net.bio.net Tue Oct 10 23:00:00 1995
Path: biosci!citi2.fr!bollet
From: bollet@citi2.fr (Claude Bollet)
Newsgroups: bionet.molbio.rapd
Subject: soil DNA extraction/J.RIGOT
Date: 11 Oct 1995 02:46:22 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 9
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <9510110941.AA07854@bisance.citi2.fr>
NNTP-Posting-Host: net.bio.net

For small amounts, you should try micro-wave oven extraction method (Nucleic Acids Res., 1991, 19, 1955). Good luck,
-- 
claude bollet
AFCOPAT
249 bld sainte marguerite
13009 Marseille - France
tel (33) 91 74 50 23
fax (33) 91 74 60 44
lab (33) 91 74 50 52

From owner-rapd@net.bio.net Wed Oct 11 23:00:00 1995
Path: biosci!LIFSCI.SDSU.EDU!MCCLELLAND
From: MCCLELLAND@LIFSCI.SDSU.EDU (by way of Chris.Bolch@ml.csiro.au (Christopher Bolch))
Newsgroups: bionet.molbio.rapd
Subject: RE: Garbage postings
Date: 11 Oct 1995 20:29:00 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 15
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <199510120327.OAA28804@aqueous.ml.csiro.au>
NNTP-Posting-Host: net.bio.net


A suggestion for other RAPD subscribers who would like to give it to the
postee of rubbish from Michael McClelland:


Send mail to postmaster@ the address. Try various parts like
postmaster@uiuc.edu. I have been doing this as a matter of course
for all my junk mail.

Be polite. the person reading it will be a system administrator.






From owner-rapd@net.bio.net Wed Oct 11 23:00:00 1995
Path: biosci!WAIKATO.AC.NZ!marys
From: marys@WAIKATO.AC.NZ (Mary Skotnicki)
Newsgroups: bionet.molbio.rapd
Subject: Re: Garbage postings
Date: 11 Oct 1995 18:11:31 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 29
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <v01510102aca21504234b@[130.217.144.41]>
NNTP-Posting-Host: net.bio.net

I usually just discard junk messages, but I too was really fed up with
receiving twenty messages from Elena Foshay, and with my response not bein
accepted by her email address. So I checked her out (student at University
of Illinois, with University email address) using Netscape, and remailed
copies of her three messages to the Senior Computer Programmer there with a
request to stop her sending out more postings. Let's hope that stops at
least this one prolific individual.

Christopher Bolch wrote:
>I have been bombarded by a lot of "junk e-mail" from this list over the
>past few weeks.  It culminated this morning with 5 posts from an  elena
>foshay.  What is really irritating is that the return addresses appear to
>be bogus so that I can't even get the satisfaction of telling to sod-off.
>I'm sure that most of you are just as pissed off as I am by this.
>
>If anyone has any ideas on how to combat this rising incidence of chain
>letters and other irrelevent drivel let me know.
>

Mary L. Skotnicki
Dept. of Biological Sciences
School of Science and Technology
University of Waikato
Hamilton
New Zealand

marys@waikato.ac.nz



From owner-rapd@net.bio.net Wed Oct 11 23:00:00 1995
Path: biosci!ACAD.URSINUS.EDU!kgoddard
From: kgoddard@ACAD.URSINUS.EDU
Newsgroups: bionet.molbio.rapd
Subject: descriibe
Date: 11 Oct 1995 14:32:37 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 1
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <00997B7A.C45A2900.22@acad.ursinus.edu>

please delete me from this network.

From owner-rapd@net.bio.net Wed Oct 11 23:00:00 1995
Path: biosci!rutgers!uwm.edu!vixen.cso.uiuc.edu!howland.reston.ans.net!swrinde!emory!news.cc.emory.edu!usenet
From: Brad Thomas <bthomas@gmm.gen.emory.edu>
Newsgroups: bionet.molbio.hiv,bionet.molbio.methds-reagnts,bionet.molbio.molluscs,bionet.molbio.proteins,bionet.molbio.rapd
Subject: Re: Make a $1,000,000 in 90 Days!
Date: 11 Oct 1995 23:51:55 GMT
Organization: Emory University
Lines: 4
Message-ID: <45hlar$894@moe.cc.emory.edu>
References: <45ge3g$o1j$5@mhafn.production.compuserve.com>
NNTP-Posting-Host: alvin.gen.emory.edu
Mime-Version: 1.0
Content-Type: text/plain; charset=us-ascii
Content-Transfer-Encoding: 7bit
X-Mailer: Mozilla 1.1N (Macintosh; I; 68K)
X-URL: news:45ge3g$o1j$5@mhafn.production.compuserve.com
Xref: biosci bionet.molbio.hiv:1676 bionet.molbio.methds-reagnts:34766 bionet.molbio.molluscs:173 bionet.molbio.proteins:5915 bionet.molbio.rapd:1326

Does this have something to do with smuggling aliens ?  (Sorry for the 
bandwidth)



From owner-rapd@net.bio.net Wed Oct 11 23:00:00 1995
Path: biosci!ml.csiro.au!Chris.Bolch
From: Chris.Bolch@ml.csiro.au (Christopher Bolch)
Newsgroups: bionet.molbio.rapd
Subject: RE: Garbage postings
Date: 11 Oct 1995 20:53:14 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 11
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <199510120351.OAA00936@aqueous.ml.csiro.au>
NNTP-Posting-Host: net.bio.net

Sorry Michael and RAPD netters,
T
he introductory sentence  is not meant to mean that rubbish is posted from
Mike McClelland .  A full stop went missing in there somewhere.

What I meant is the suggestion came from Michael McClelland

Chris




From owner-rapd@net.bio.net Wed Oct 11 23:00:00 1995
Path: biosci!ml.csiro.au!Chris.Bolch
From: Chris.Bolch@ml.csiro.au (Christopher Bolch)
Newsgroups: bionet.molbio.rapd
Subject: RE: Garbage postings
Date: 12 Oct 1995 15:53:31 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 41
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <199510122250.JAA19901@aqueous.ml.csiro.au>
NNTP-Posting-Host: net.bio.net


A good suggestion for reducing junk mail is below.

I will mail it to the bionet administrator, anyone know the address?


>From: BIO_HANNAN@emuvax.emich.edu
>Date: Wed, 11 Oct 1995 21:35:07 -0400 (EDT)
>To: Chris.Bolch@aqueous.ml.csiro.au
>Subject: RE: Garbage postings
>
>It is possible to allow postings only from persons who have subscribed to the
>group.  At least that might sovle the accountability problem ,and allow
>others to flame spammers.
>
>Gary Hannan
>
>

________________________________________
Any views, statements of intent, or comment in this letter
have no official status and do not constitute or imply any
contract with myself or my employer.
________________________________________
Christopher J. S. Bolch,
Algal Ecologist/Geneticist,
CSIRO Division of Fisheries,
GPO Box 1538,
Hobart, Tasmania,
Australia, 7001.

Australia
PH. 002 325314
FAX 002-325000

International
PH.  061-02-325314
FAX. 061-02-325000
________________________________________



From owner-rapd@net.bio.net Thu Oct 12 23:00:00 1995
Path: biosci!ASRR.ARSUSDA.GOV!abartlet
From: abartlet@ASRR.ARSUSDA.GOV ("Alan C. Bartlett")
Newsgroups: bionet.molbio.rapd
Subject: Re: Garbage postings
Date: 13 Oct 1995 11:51:55 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 16
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <Pine.SOL.3.91.951013144450.27420A-100000@asrr.arsusda.gov>
References: <v01510102aca21504234b@[130.217.144.41]>

Along with the rest of you, I am disturbed by the posting of garbage by 
people like Elena Foshay.  The addresses she used were all in Scottsdale, 
Arizona, so I checked them out.  There are no legitimate businesses 
listed in Scottsdale under any of the names posted.  These are obviously 
boilerplate addresses.  I have made copies of the postings and plan to go 
to the address to register my objection to the use of the net for such 
postings.  I appreciate the fact that Mary was able to get to the Foshay 
computer.  All of my flames bounced back.  We have to get this stopped 
because it is becoming a plague.

Alan C. Bartlett
"GENES-R-US"
"ALTERATIONS AVAILABLE!^"
"^some restrictions may apply:)"



From owner-rapd@net.bio.net Thu Oct 12 23:00:00 1995
Path: biosci!IGC.APC.ORG!uspugwash
From: uspugwash@IGC.APC.ORG (Student Pugwash USA)
Newsgroups: bionet.molbio.rapd
Subject: Nobel Peace Prize to Pugwash Conferences
Date: 13 Oct 1995 13:13:10 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 49
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <199510132010.NAA16379@igc4.igc.apc.org>

(With apologies for duplicate postings...)

----------------NEWS RELEASE-------------------

Contact:  Sandra J. Ionno
202-393-6555


For immediate release
October 13, 1995


Student Pugwash USA Commends Awarding of Nobel Prize to 
Professor Rotblat and Pugwash Conferences

(Washington, DC)--Student Pugwash USA celebrates the award 
of the Nobel Peace Prize to Professor Joseph Rotblat and the 
Pugwash Conferences on Science and World Affairs.  "The work 
of Professor Rotblat and the Pugwash Conferences has inspired a 
vital student movement across the United States and around the 
world," Sandra J. Ionno, Executive Director of Student Pugwash 
USA said earlier today.  Founded in 1979, Student Pugwash USA 
is modeled after the Pugwash Conferences on Science and World 
Affairs, which began in 1957 in Pugwash, Nova Scotia.  Student 
Pugwash USA draws on the Pugwash tradition as it prepares 
students to meet the challenges they will face as global citizens and 
decision-makers in the 21st century.

"Awarding the Nobel Peace Prize to Professor Rotblat and 
Pugwash demonstrates vividly that individual responsibility is the 
first step on the pathway to peace," Ionno added.  "The renewed 
French and Chinese nuclear testing programs prove the need for 
ethics to play a greater role in scientific decision-making if we are 
going to make the world a truly safer, more secure place," she 
said. 

Albert Einstein, Bertrand Russell, and award-winner Joseph 
Rotblat were among the signers in 1955 of a manifesto urging 
scientists to consider the social, moral, and ethical implications of 
weapons of mass destruction.  The Pugwash spirit has always 
implied the need for scientists to broadly consider the ethical 
implications of their work.  

Student Pugwash USA has chapters on 50 campuses across the 
United States and is one of 24 national Student/Young Pugwash 
groups around the world.

-30-


From owner-rapd@net.bio.net Thu Oct 12 23:00:00 1995
Path: biosci!ACD.TUSK.EDU!Prakash
From: Prakash@ACD.TUSK.EDU (C. S. Prakash)
Newsgroups: bionet.molbio.rapd
Subject: Pugwash wins Nobel Peace Prize
Date: 13 Oct 1995 07:58:03 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 43
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <01HWDYKIYQAQ000C6O@Acd.Tusk.Edu>

Pugwash International organization and its present leader Joesph Rodblatt
who won the Nobel Peace Prize are little known.  The organization derives
its name from the Pugwash village in Nova Scotia where "Pugwash Manifesto"
was developed by a group of visionary thinkers in 1955 including Albert
Einstein, Bertrand Russell, Linus Pauling and Jonas Salk.  The manifesto
urged citizens of the world to fufill their moral obligation to deal with
the danger of nuclear weapons. Pugwash has been very instrumental in ending
the coldwar. 

Student Pugwash USA, based in Washington, DC is related to the Pugwash
International.  However, the Student Pugwash deals with broader scientific
and societal issues, and attempts to foster a dialogue among students on
issues such as societal impacts of human genome mapping, reprodutive
technologies, agricultural biotechnology, energy etc at US college
campuses.  It holds a conference once in two years, invites students from
across the globe and also many leaders from academia, administration and
industry.  Student Pugwash chapters in campuses are actively promoting such
discussions.  I was invited as a student participant in a conference during
1985 at Princeton University and then was a facilitator in 1987 at Stanford
University.  Student Pugwash does not take stand on issues and is a great
forum for young scientists to meet other like minded people and to discuss
issues on how our research affects the world.

Those interested in receiving more information about Student Pugwash may
contact 

                Student Pugwash USA
                815, 15 st NW, Suite 814
                Washington, DC 20815

                1-800-969-2784
                Fax: (202) 797-4664
                Internet: uspugwash@igc.apc.org


C. S. Prakash                                  Voice (334) 727 - 8023 
Tuskegee University                            Fax   (334) 727 - 8552
School of Agriculture                          Email:  Prakash@Acd.Tusk.Edu 
Tuskegee, Alabama 36088 USA                
                             




From owner-rapd@net.bio.net Sat Oct 14 23:00:00 1995
Path: biosci!daresbury!not-for-mail
From: "Miss D.A. Heipel" <D.A.Heipel@liverpool.ac.uk>
Newsgroups: bionet.molbio.rapd
Subject: RAPDPLOT/PHYLIP
Date: 15 Oct 1995 22:05:14 +0100
Lines: 9
Sender: lpddist@mserv1.dl.ac.uk
Distribution: bionet
Message-ID: <45rt2a$lol@mserv1.dl.ac.uk>
MIME-Version: 1.0
Original-To: rapd@dl.ac.uk

I am trying to analyse RAPD-data using the programs RAPDPLOT and
the PHYLIP-package. The matrices produced by RAPDPLOT seem to ok,
but when I run them in the Neighbor-program in PHYLIP to construct 
an UPGMA tree, it gives the message 'argument singularity in log'.
Does anybody know what that means?
Maybe someone could send me another version of PHYLIP?

Thanks,
	 Diana

From owner-rapd@net.bio.net Sat Oct 14 23:00:00 1995
Path: biosci!ml.csiro.au!Chris.Bolch
From: Chris.Bolch@ml.csiro.au (Christopher Bolch)
Newsgroups: bionet.molbio.rapd
Subject: Re: Chain letters and junk mail on RAPD net
Date: 15 Oct 1995 15:44:16 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 76
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <199510152242.JAA09290@aqueous.ml.csiro.au>
NNTP-Posting-Host: net.bio.net

>Sender: BIOSCI Administrator <biohelp@net.bio.net>
>Date: Fri, 13 Oct 95 10:59:21 PDT
>From: BIOSCI Administrator <biosci-help@net.bio.net>
>Reply-To: biosci-help@net.bio.net
>To: Chris.Bolch@aqueous.ml.csiro.au (Christopher Bolch)
>Subject: Re: Chain letters and junk mail on RAPD net
>
>> Dear bionet helper,
>>
>> There has been asharp increase in the amount of unsolicited junk mail and
>> chain letters arrive in the last few weeks.  Most of it has come to me
>> through" rapd@net.bio.net".  Often the mail is sent from bogus addresses so
>> I cannot even reply to ask then to desist.  True commercial interests
>> usually only have to be told once and they stop.
>
>Right.  It is getting useless to protest these things.  I just posted
>a note on bionet.general about similar issues.
>
>> I think most of us do not mind individuals or groups who are advertising
>> relevent molecular biology products which are novel, unavailable
>> commercially, or are being offered at a substantially reduced rate (e.g.
>> Some of the University groups offering oligo synthesis or particular PCR
>> primers etc)
>
>We do not even permit these.  Opening the door to these posts would
>set a bad precedent - again see bionet.general.
>
>> A copy of my correspondence to the list and a reply from Gary Hannan is
>> shown below.  Gary had what I thought was a viable means of stemming the
>> tide or garbage.  Is it possible to establish a setup so that only
>> subscribers to the list, with real addresses can, mail to the list?  At
>> least then the users could track down the culprit and tell them to go away.
>> Network administrators could then also remove their registration if
>> necessary.
>
>Gary's idea is not new.  We proposed this ourselves early this year
>but did not meet with a great response at the time.  It also entails
>additional software development both here and at our Daresbury site
>and additional ongoing maintenance as people change addresses.  The
>easiest way to cut this down is if someone, usually the current group
>discussion leader, wants to moderate the newsgroup.  You might want to
>start a discussion about finding a moderator on the rapd newsgroup.
>If someone wants to step forward we can convert the group and stop
>most of the spams.
>
>                                Sincerely,
>
>                                Dave Kristofferson
>                                BIOSCI/bionet Manager
>
>                                biosci-help@net.bio.net
>
>

________________________________________
Any views, statements of intent, or comment in this letter
have no official status and do not constitute or imply any
contract with myself or my employer.
________________________________________
Christopher J. S. Bolch,
Algal Ecologist/Geneticist,
CSIRO Division of Fisheries,
GPO Box 1538,
Hobart, Tasmania,
Australia, 7001.

Australia
PH. 002 325314
FAX 002-325000

International
PH.  061-02-325314
FAX. 061-02-325000
________________________________________



From owner-rapd@net.bio.net Mon Oct 16 23:00:00 1995
Path: biosci!internet!biosci!not-for-mail
From: biohelp (BIOSCI Administrator)
Newsgroups: bionet.molbio.rapd
Subject: IMPORTANT: BIOSCI miniFAQ
Date: 17 Oct 1995 02:02:29 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 196
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <199510170900.CAA08986@net.bio.net>
NNTP-Posting-Host: net.bio.net


This is a new "miniFAQ" designed to answer the questions that come up
the *most frequently*.  The main BIOSCI FAQ (Frequently Asked
Questions) is accessible on the World Wide Web at URL
http://www.bio.net/.

	Contents:
	--------
	1) What to do about "spams," i.e., junk mail, ads, etc.

	2) Examples of subscribing and unsubscribing to the mailing lists.

	3) How to access BIOSCI/bionet newsgroup archives.

	4) The BIOSCI user address and research interest directory.


1) What to do about "spams," i.e., junk mail, ads, etc.
-------------------------------------------------------
BIOSCI is a set of parallel USENET newsgroups (the "bionet" groups)
and mailing lists.  The same postings are distributed on both media
(except for a small number of mailing-list-only groups at
net.bio.net).  Unfortunately it is becoming a despicable practice on
the Internet (by a few people out to make a fast buck) to do automated
mass postings to thousands of newsgroups and mailing lists.  These
attempts to grab free advertising are refered to as "spams" in the
usual, somewhat boneheaded, net terminology.  USENET is more
susceptible to this practice, and many spams originate on the USENET
groups and then are passed on to the mailing lists.  However, spammers
also get lists of mailing addresses and hit these too, so neither
medium is immune.

What should you do personally if you get junk mail?
---------------------------------------------------
Just delete it and move on without reading it further.  Filing a
protest is becoming increasingly useless because spammers are often
disguising the addresses where the messages are sent from.  Unless you
really understand Internet mail systems, your attempt at protest by
sending replies to the message will often end up being sent to the
address of an innocent person that the spammer is victimizing.

What can BIOSCI/bionet do to protect its newsgroups?
----------------------------------------------------
The only solution currently available is to moderate the newsgroup.
If this newsgroup is already moderated, then you are in good shape.
Moderation protects the newsgroups from about 95% of the spams that
are being sent to date.  This means that someone has to take the time
to review each message before it goes out.  We have set up software
here that simply allows the moderator to forward to an address at
net.bio.net messages that (s)he wishes to have distributed.  This
takes no more time than that needed to read the message and pass it
on, say about 1 min. per message.

Most newsgroups currently have a discussion leader who is responsible
for their newsgroup.  The discussions leaders and their e-mail
addresses are listed in the BIOSCI Information Sheet which is
available on the Web at http://www.bio.net/.  If a newsgroup is being
hit with too many junk postings, please contact the discussion leader
for that group and see if there is interest in moderating the group.
Please do not assume that by simply posting a complaint to the
newsgroup itself, anyone on the BIOSCI staff will act on your
complaint.  With close to 100 newsgroups to run, the BIOSCI staff has
to rely on the discussion leaders of each newsgroup to report problems
directly to us at biosci-help@net.bio.net.

We will moderate any of our newsgroups if the discussion leader tells
us that the readership of the group wishes to do so and if a moderator
is willing to do the work.  For most BIOSCI/bionet groups, this
entails only a few minutes of work each day.

Moderating a newsgroup will resolve probably 95% of the junk postings.
Unfortunately there are easy ways for determined spammers to override
the moderation mechanism.  We are working on new systems to provide
access to our newsgroups over the WWW.  These should be available
soon, probably November 1995, and will allow you to use your Web
browser to look at the news postings.  While this will not stop
spammers from trying to post to the groups, this will give you yet
another way, besides using USENET news, to keep the junk out of your
personal mail files.


2) Examples of subscribing and unsubscribing to the mailing lists.
------------------------------------------------------------------
PLEASE NOTE: The BIOSCI management does NOT act on
subscription/unsubscription requests that are posted improperly to the
newsgroups and mailing lists.  People who do this only bother everyone
on the lists to no avail.  Please be sure to follow the proper
procedures below.

Gory details are in the BIOSCI Information sheets on the Web at
http://www.bio.net.  Below we give an example utilizing the
METHODS-AND-REAGENTS list at both of our two BIOSCI sites:

Users in the Americas and Pacific Rim countries who use the BIOSCI
------------------------------------------------------------------
node at computer net.bio.net:
----------------------------

A) Determine the "listname" which is the <=8 character mail address
                                         ^^^^^^^^^^^^^
   for the group.  These can be found in the BIOSCI Info. Sheet.  For
   the METHODS-AND-REAGENTS group the mailing address is
   methods@net.bio.net.  The listname is the portion of the address to
   the left of the @ sign, i.e., "methods".  The listname is used with
   the "subscribe" and "unsubscribe" commands illustrated below.

B) Mail all commands in the body of a mail message addressed to
   biosci-server@net.bio.net.  Do NOT send commands to the newsgroup
   posting addresses!  Leave the Subject: line blank, any text on it
   will be ignored.

C) In the body of your message put one or more of the following
   commands with an "end" command on the last line, e.g.,

   subscribe methods
   unsubscribe methods
   end

   Do NOT put your e-mail address or other text on these lines.  The
   server only allows you to cancel your subscription if the address
   on your mail header matches the address on our mailing list.
   Please ask for help at biosci-help@net.bio.net if your address has
   changed, e.g., if you know you are on the list but the server tells
   you that you are not a member.


Users in Europe, Africa, and Central Asia who use the BIOSCI node at
--------------------------------------------------------------------
computer daresbury.ac.uk (also known as dl.ac.uk):
-------------------------------------------------

To subscribe and unsubscribe to/from the BIOSCI lists, you need to
specify the full USENET newsgroup name with "bionet-news." prepended.
The USENET newsgroup names are listed in the BIOSCI Information sheet
on the Web at http://www.bio.net/.  For the METHODS-AND-REAGENTS list
the USENET newsgroup name is bionet.molbio.methds-reagnts, thus the
appropriate commands are

    sub bionet-news.bionet.molbio.methds-reagnts

    unsub bionet-news.bionet.molbio.methds-reagnts

These commands are included in a message addressed to mxt@dl.ac.uk,
NOT to the newsgroup mailing addresses.  As usual, include the text in
the body of the message as text on the Subject: line is ignored.

To unsubscribe from all the lists at the UK node, use

    unsub bionet-news

Please note that if the address in the list is different than the one
in your mail message header, you will not be able to unsubscribe by
this method. If you have problems, please mail biosci@daresbury.ac.uk.


3) How to access BIOSCI/bionet newsgroup archives.
--------------------------------------------------
Back postings of all BIOSCI/bionet newsgroups can be found on the
World Wide Web at URL http://www.bio.net/.  There are several
searchable newsgroup indices at this site.  E-mail users can search
the BIOSCI archives by using our waismail e-mail server.  For
instructions send the message

help

to waismail@net.bio.net.  Leave the Subject: line blank (anything
entered on the Subject: line is ignored).


4) The BIOSCI user address and research interest directory.
-----------------------------------------------------------
Please take this opportunity to add your name, address, and research
interest information to the BIOSCI User Address Database if you have
not already done so.

You can fill out the address form directly through our Web page at URL
http://www.bio.net/adrform.html.

The address database is reindexed nightly for WWW access (the URL is
http://www.bio.net/).  If you are not directly on the Internet but can
reach it by e-mail, please use our waismail server to access the user
directory.  waismail use is described above.  You can also request a
user address form by e-mail from biosci-help@net.bio.net.

Please check your database entry from time-to-time to see if your
address information is still up-to-date.  Because of our limited
personnel resources, we ask that you resubmit a *complete* form to
revise your entry; we only replace complete entries and do not have
resources to edit old forms.

				Sincerely,

				Dave Kristofferson
				BIOSCI/bionet Manager

				biosci-help@net.bio.net

From owner-rapd@net.bio.net Wed Oct 18 23:00:00 1995
Path: biosci!bcm.tmc.edu!news.msfc.nasa.gov!newsfeed.internetmci.com!info.ucla.edu!agate!news.ucdavis.edu!dale!ez026048
From: ez026048@dale.ucdavis.edu (Hong Lin)
Newsgroups: bionet.molbio.rapd
Subject: Diversity
Date: 18 Oct 1995 04:39:40 GMT
Organization: University of California, Davis
Lines: 3
Message-ID: <4620ec$a0u@mark.ucdavis.edu>
NNTP-Posting-Host: dale.ucdavis.edu
Summary: puzzle:
X-Newsreader: TIN [version 1.2 PL2]

Keywords: 



From owner-rapd@net.bio.net Sat Oct 21 23:00:00 1995
Path: biosci!agate!howland.reston.ans.net!news.sprintlink.net!simtel!zombie.ncsc.mil!cs.umd.edu!haven.umd.edu!purdue!lerc.nasa.gov!magnus.acs.ohio-state.edu!infoserver.bgsu.edu!bgnet.bgsu.edu!pmorris
From: pmorris@bgnet.bgsu.edu (Paul Francis Morris)
Newsgroups: bionet.molbio.rapd
Subject: very small rapd band
Date: 22 Oct 1995 23:31:38 GMT
Organization: Bowling Green State University, Bowling Green, OH (USA)
Lines: 15
Message-ID: <46ek8q$6ec@infoserver.bgsu.edu>
Reply-To: pmorris@bgnet.bgsu.edu (Paul Francis Morris)
NNTP-Posting-Host: bgnet1.bgsu.edu

I am having some difficulty getting RAPD's to work in a new lab, on a new 
machine (LC2400, using a new protocol.  The only band that I see on 2% 
agarose gels is one that runs below the bromophenol blue marker i.e.: 
less than 50-100bp.  I am using the Stoffel fragment and a MgCl of 2.5 
mM.  One thought that I had was that perhaps I don't have sufficient 
melting of the template DNA (first melt 75 sec.).  Another idea that I 
have is that the ratio of the random primers to the fungal DNA 
concentration is too high and I should reduce the concentration of the 
Operon primer I am using (OPC10).  This primer has worked reliably in the 
past which 
is why I started with it here.  The sequence of OPC-10 is TGTCTGGGTG if 
that is informative. In previous work I have found that I got best 
amplification with very small amounts of this fungal DNA usually less 
than 2.5 ng total/25 ul.  
Furthur suggestions or guesses are welcome. 

From owner-rapd@net.bio.net Sun Oct 22 22:00:00 1995
Path: biosci!ACD1.BYU.EDU!FARMERJ
From: FARMERJ@ACD1.BYU.EDU (James Farmer)
Newsgroups: bionet.molbio.rapd
Subject: moderation of rapd usergroup
Date: 23 Oct 1995 09:08:32 -0700
Organization: Brigham Young University
Lines: 24
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <B27BBA182C@acd1.byu.edu>

I just returned form a week at a meeting and found a lot of e-mail, 
including three on commercial postings to bionet.  I guess I am still 
the discussion leader for rapd, so before someone proposes that we 
move to a moderated format to eliminate commercial postings, let me 
make this one comment.

I would be willing to be a moderator, or I would be willing to 
transfer that responsibility to someone else.  Just remember that in 
trade for fewer commercial postings you give up response time.  I 
would only be willing to check the postings once or twice a day, and 
I would often be away from the office on weekends and for a day or so 
at other times.  I assume that I could transfer the moderator duties 
to someone else when I leave town for an extended period.  That means 
we would nearly always have to wait a day for a response to a 
question.  I think that delays might be more obnoxious for many people than 
the occasional commercial message.  You can delete commercials in a 
few seconds, but you can't speed up the moderation.

I suggest that we continue as at present unless the commercial 
problem becomes considerably worse.  Nonetheless, I will go with the 
majority if you all feel otherwise. 

James Farmer
farmerj@byu.edu

From owner-rapd@net.bio.net Sun Oct 22 22:00:00 1995
Path: biosci!bcm.tmc.edu!news.msfc.nasa.gov!newsfeed.internetmci.com!news.sprintlink.net!news00.sunet.se!sunic!news99.sunet.se!columba.udac.uu.se!populus.slu.se!newsmgr
From: Alfred.Szmidt@genfys.slu.se (Alfred E. Szmidt)
Newsgroups: bionet.molbio.rapd
Subject: Re: RAPDPLOT/PHYLIP
Date: 23 Oct 1995 21:18:31 GMT
Organization: SLU, Umeå
Lines: 11
Distribution: bionet
Message-ID: <46h0r7$hce@populus.slu.se>
References: <45rt2a$lol@mserv1.dl.ac.uk>
NNTP-Posting-Host: b203.genfys.slu.se
Mime-Version: 1.0
Content-Type: Text/Plain; charset=ISO-8859-1
X-Newsreader: WinVN 0.99.5

Could you first indicate which version are you using now?

Best wishes,

Alfred E. Szmidt

In article <45rt2a$lol@mserv1.dl.ac.uk>, D.A.Heipel@liverpool.ac.uk says...
>
>I am trying to analyse RAPD-data using the programs RAPDPLOT and
>the PHYLIP-package.


From owner-rapd@net.bio.net Sun Oct 22 22:00:00 1995
Path: biosci!ASRR.ARSUSDA.GOV!abartlet
From: abartlet@ASRR.ARSUSDA.GOV ("Alan C. Bartlett")
Newsgroups: bionet.molbio.rapd
Subject: Re: very small rapd band
Date: 23 Oct 1995 08:10:05 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 16
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <Pine.SOL.3.91.951023110105.18236C-100000@asrr.arsusda.gov>
References: <46ek8q$6ec@infoserver.bgsu.edu>

I have found two things that caused previously successful rapd bands to 
disappear.  I had a bad batch of dNTP's from Perkin-Elmer that gave very 
sporadic results, but mostly blank lanes.  We recently became much more 
efficient in extracting DNA and found out that we had to cut the amount 
of the DNA aliquot in half in order to make our reactions work.  Perhaps 
your new protocol gives you better DNA.  I have been told that the low 
molecular weight band you describe is composed of oligos of the primer.  
That seems correct since it seems to always appear in blank lanes, but I 
haven't sequenced it to actually see.

Alan C. Bartlett
"GENES-R-US"
"ALTERATIONS AVAILABLE!^"
"^some restrictions may apply:)"



From owner-rapd@net.bio.net Tue Oct 24 22:00:00 1995
Path: biosci!ASRR.ARSUSDA.GOV!abartlet
From: abartlet@ASRR.ARSUSDA.GOV ("Alan C. Bartlett")
Newsgroups: bionet.molbio.rapd
Subject: Re: moderation of rapd usergroup
Date: 24 Oct 1995 08:33:00 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 17
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <Pine.SOL.3.91.951024112120.12916A-100000@asrr.arsusda.gov>
References: <B27BBA182C@acd1.byu.edu>

Although I am ordinarily a very moderate person, in this case I would 
vote for non-moderation.  People have suggested other remedies which seem 
to me more appropriate.  I am pursuing a complaint with the postmaster 
general concerning a couple of the recent chainletter posting we have 
had.  The local postmaster had no sympathy with me since he claimed no 
responsibility for the internet.  However, I still feel that since the 
perpetrators are asking us to use the mail to obtain their services and 
to foster their Ponzi schemes, the Post Office should be involved.  Deep 
in my heart I know they won't get involved, but I am so ticked off at 
these slimeballs that I feel a need to try.

Alan C. Bartlett
"GENES-R-US"
"ALTERATIONS AVAILABLE!^"
"^some restrictions may apply:)"



From owner-rapd@net.bio.net Tue Oct 24 22:00:00 1995
Path: biosci!CS.Arizona.EDU!news.Arizona.EDU!hamblin.math.byu.edu!usenet
From: farmerj <farmerj@byu.edu>
Newsgroups: bionet.molbio.rapd
Subject: Has anyone tried BRL AFLP kit on Drosophila?
Date: 24 Oct 1995 22:31:50 GMT
Organization: Brigham Young University
Lines: 8
Message-ID: <46jpgm$9en@hamblin.math.byu.edu>
NNTP-Posting-Host: farmerj.byu.edu
Mime-Version: 1.0
Content-Type: text/plain; charset=us-ascii
Content-Transfer-Encoding: 7bit
X-Mailer: Mozilla 1.22 (Windows; I; 32bit)

I am considering AFLP as a supplement to RAPD and PCR.  
However, BRL says the DNA must be very pure.  Since I use DNA 
from a single fly, I can't do a whole lot of purification.  Has 
anyone tried AFLP on crude insect DNA?

James Farmer
Brigham Young University


From owner-rapd@net.bio.net Thu Oct 26 22:00:00 1995
Path: biosci!rutgers!oitnews.harvard.edu!fas-news.harvard.edu!husc7!crcortes
From: crcortes@husc7.harvard.edu (C Cortese)
Newsgroups: bionet.molbio.rapd
Subject: RAPDPLOT and PHYLIP
Date: 27 Oct 1995 13:07:25 GMT
Organization: Harvard University, Cambridge, Massachusetts
Lines: 3
Message-ID: <46qlid$2gp@decaxp.harvard.edu>
NNTP-Posting-Host: husc7.harvard.edu
X-Newsreader: TIN [version 1.2 PL2]

I use PHYLIP, but was not aware of RAPDPLOT.  Is it available by ftp?

					crc

From owner-rapd@net.bio.net Thu Oct 26 22:00:00 1995
Path: biosci!SERVIDOR.DGSCA.UNAM.MX!carvalho
From: carvalho@SERVIDOR.DGSCA.UNAM.MX (Carvalho Torres Alexandro cassio-UACPYP)
Newsgroups: bionet.molbio.rapd
Subject: (none)
Date: 27 Oct 1995 07:39:28 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 2
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <Pine.SOL.3.91.951027083552.21520A-100000@servidor>


ssssss

From owner-rapd@net.bio.net Fri Oct 27 22:00:00 1995
Path: biosci!IRRI.CGNET.COM!NHUANG
From: NHUANG@IRRI.CGNET.COM
Newsgroups: bionet.molbio.rapd
Subject: RAPD, AFLP and varietal identification
Date: 28 Oct 1995 01:05:17 -0700
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 12
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <01HWZ9WZ3R8W000U2N@irri.cgnet.com>
NNTP-Posting-Host: net.bio.net

Dear netter,

We are interested to have a standardized DNA fingerprinting procedure
and standard for rice varietal identification.  We are troubled with
low reproducibility of RAPD, low polymorphism of STS (PCR).  Is the 
AFLP the way to go?

Are there any accepted standard for varietal identification? If yes,
can you tell me where to find it? If no, do we need one and how to 
establish one?   Thanks.

Ning Huang

From owner-rapd@net.bio.net Sun Oct 29 22:00:00 1995
Path: biosci!FCCC.EDU!jc_pugh
From: jc_pugh@FCCC.EDU ("Dr. John Pugh")
Newsgroups: bionet.molbio.rapd
Subject: None
Date: 30 Oct 1995 14:01:59 -0800
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 11
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <ACBA9F45@blues.rm.fccc.edu>
NNTP-Posting-Host: net.bio.net

unsubscribe

-------------------------------------------------------------------------------
Dr. John Pugh at :
jc_pugh@fccc.edu
The Fox Chase Cancer Center
7701 Burholme Avenue
Philadelphia, PA 19111
(215) 728-4780



From owner-rapd@net.bio.net Sun Oct 29 22:00:00 1995
Path: biosci!ACD.TUSK.EDU!Prakash
From: Prakash@ACD.TUSK.EDU (C. S. Prakash)
Newsgroups: bionet.molbio.rapd
Subject: Re: primer kits for RAPDs
Date: 30 Oct 1995 13:40:05 -0800
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 25
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <01HX1V6HFRS20006YJ@Acd.Tusk.Edu>
NNTP-Posting-Host: net.bio.net

University of British Columbia sells many RAPD primer kits.

Contact them at hobbs@unixg.ubc.ca (John Hobbs)

Operon Inc. also sells RAPD kits.



>Does anyone know who produces RAPD primer kits
>I have used the Advanced Biotechnology kits and need
>some more.
>I am interested in some kits which are cheap as well as effective
>for mammalian RAPD production!!
>
>many thanks

C. S. Prakash                                  Voice (334) 727 - 8023 
Tuskegee University                            Fax   (334) 727 - 8552
School of Agriculture                          Alt. Fax (334) 727 - 8493
Tuskegee, Alabama 36088 USA                    Email:  Prakash@Acd.Tusk.Edu
              
                             




From owner-rapd@net.bio.net Sun Oct 29 22:00:00 1995
Path: biosci!daresbury!not-for-mail
From: J J Dooley <J.J.Dooley@bath.ac.uk>
Newsgroups: bionet.molbio.rapd
Subject: primer kits for RAPDs
Date: 30 Oct 1995 14:59:41 -0000
Lines: 7
Sender: lpddist@mserv1.dl.ac.uk
Distribution: bionet
Message-ID: <472p8t$7df@mserv1.dl.ac.uk>
Original-To: rapd@dl.ac.uk

Does anyone know who produces RAPD primer kits
I have used the Advanced Biotechnology kits and need
some more.
I am interested in some kits which are cheap as well as effective
for mammalian RAPD production!!

many thanks

From owner-rapd@net.bio.net Sun Oct 29 22:00:00 1995
Path: biosci!bcm.tmc.edu!news.msfc.nasa.gov!newsfeed.internetmci.com!in1.uu.net!uunet.ca!news.uunet.ca!banshee.uunet.ca!nobody
Message-ID: <951029.133804.16558@banshee.uunet.ca>
Sender: nobody@banshee.uunet.ca
X-Nntp-Posting-Host: 142.77.242.63
From: Gwade@physiology.uwo.ca
Newsgroups: bionet.molbio.rapd
Subject: Lightening FAST ELISA & DNA DOT BLOT
Date: Sun, 29 Oct 1995 23:04:30 GMT
X-Newsreader: Forte Free Agent 1.0.82
Lines: 24


Kalyx Biosciences (Ottawa, Ontario, Canada) has developed a new matrix
on which ELISA and Nucleic Acid Hybridization can be performed.  EIA
results can be acheived in minutes while DNA dot blot experiments can
be performed in hours as opposed to days.

Polymacron is less expensive than nylon or other matrices.  We've used
this stuff in the lab and the results are incredible.

I've also had great help from the technical support people at Kalyx.

Give em' a call or email them to get product literature.

Kalyx@magi.com
800 661-6052

Greg Wade
Ph.D. Candidate
Department of Physiology
The University of Western Ontario.
London, Ontario Canada

Gwade@physiology.uwo.ca


From owner-rapd@net.bio.net Mon Oct 30 22:00:00 1995
Path: biosci!bcm.tmc.edu!cs.utexas.edu!howland.reston.ans.net!newsfeed.internetmci.com!news.compuserve.com!news.production.compuserve.com!news
From: Brian B. Jiang <73344.437@CompuServe.COM>
Newsgroups: bionet.molbio.proteins,bionet.molbio.rapd,bionet.molbio.yeast,bionet.molec-model,bionet.mycology
Subject: Anti-Immigration Law Status/Seminar
Date: 31 Oct 1995 08:43:31 GMT
Organization: The Law Office of Brian B. Jiang
Lines: 105
Message-ID: <474njj$58u$1@mhafn.production.compuserve.com>
Xref: biosci bionet.molbio.proteins:6142 bionet.molbio.rapd:1356 bionet.molbio.yeast:4082 bionet.molec-model:642 bionet.mycology:3017


	RE: New Development On the Anti-Immigration Bill(HR 2202) and 
			      Upcoming Seminar

Hi folks:

	As of today, the House Judiciary Committee has completed its 
markup on the Lamar Bill after 9 days of debate over several weeks.
Despite all the bad news, such as reduction of legal immigration and 
elimination of some family categories, there are a few signs of relief.
Both outstanding researchers/professors and national interest waivers were
restored to the Bill.  So professionals( scientists, post-docs, engineers
etc.) can still apply for permanent residence without labor certification
and sponsorship of their employers.

	On  the other hand, for those who have to apply through labor
cert, they are, as usual, still at the mercy of the Labor Dept.  Any 
positive change is yet to be seen.
  
	Although waiver of labor certification and employer sponsorship is
still obtainable for those who qualify, difficulties have been on the rise
and more are expected.  Nearly all four Service Centers have implemented 
some newly proposed requirements that make it very difficult to obtain an 
approval.  According to administrative rules no law should be carried out 
until it is final.  Despite the rules, INS is already treating the
proposals like enforceable law.  In the real world, things are not always 
the way they are supposed to be.  This is even more so in immigration
practice with today's anti-immigration fervor.
 
	I am an immigration attorney specializing in employment based
immigration(1st and 2nd preference).  I will hold seminars on how to apply
for a green card without labor certification and sponsorship of the employer.
The intended audiences of my seminar are professionals with advanced
degrees or a bachelor degree plus five years of work experience. I will 
also cover the impact of HR 2202 on future immigration.  The locations of 
the seminar will include: 
	
	1. University of Florida at Gainesville 
	
		University Center Hotel
		(President's Ballroom)
		1535 SW Archer Road
		Gainesville, FL
		Tel: (904)371-3333
		Time: 11/12/95 Sunday 2:00-4:00pm

	2. Columbia University at New York City
		
		Columbia University
		517 Hamilton Hall
		(close to W. 116th St. & Broadway)
		Time: 11/13/95 Monday 7:30-9:30pm

	3. Princeton University
		
		Location to be decided
		Time  11/14/95 Tuesday
		
	4. Baltimore near University of Maryland

		Holiday Inn Baltimore Inner Harbor
		(Chesateake Ballroom #1)
		301 W. Lombard Street
		Baltimore, MD		
		Tel: (410)685-3500
		Time: 11/15/95 Wed. 7:30-9:30pm
		
	5. Pittsburgh near Univ. of Pittsburgh

		Pittsburgh Green Tree Marriott
		(Near University of Pittsburgh)
		101 Marriott Drive
		Pittsburgh, PA
		Tel: (412)922-8400
		Time: 11/16/95 Thursday 7:30-9:30pm

	6. Boston at Cambridge

		Hyatt Regency Cambridge
		575 Memorial Drive
		Cambridge, MA
		Tel: (617)492-1234
		Time  11/17/95 Friday 7:30-9:30pm

	7. University of Connecticut

		Location to be decided
		Time  11/18/95 Saturday 2:30-4:30pm

	8. Palo Alto near Stanford University

		Holiday Inn Palo Alto
		(Near Stanford University)
		625 El Camino Real
		Palo Alto, CA
		Tel: (415)328-2800
		Time  11/19/95 Sunday  7:30-9:30pm

I will conduct these seminars during these time.

	All questions, comment, and suggestions are welcome.  You can also
reach me at tel. (619)278-5480 or (619)278-5492.

Brian B. Jiang  Esq.
Email: 73344.437@compuserve.com

From owner-rapd@net.bio.net Mon Oct 30 22:00:00 1995
Path: biosci!bcm.tmc.edu!news.tamu.edu!486MULLET2
From: PULANCH@bioch.tamu.edu (Paul E. Ulanch)
Newsgroups: bionet.molbio.rapd
Subject: Re: bulk segregant analysis
Date: Tue, 31 Oct 95 18:28:20 GMT
Organization: Texas A&M University
Lines: 32
Message-ID: <475ps4$s0j@news.tamu.edu>
References: <Pine.3.89.9510301106.D7130-0100000@corn.cso.niu.edu>
NNTP-Posting-Host: 486mullet2.tamu.edu
X-Newsreader: News Xpress Version 1.0 Beta #3

In article <Pine.3.89.9510301106.D7130-0100000@corn.cso.niu.edu>,
   t80bad1@CORN.CSO.NIU.EDU (Brad A Didion) wrote:
>We are considering using BSA to compare band phenotypes between two 
>groups of animals with respect to an abnormality. The animals differ only 
>for the trait as the genetic backgrounds are the same (i.e. within line).
>How many template samples are to be represented per bulk? just curious.
>
>Brad 
>

We used BSA to analyze a Sorghum population that segregated for only one trait 
and included 8 F2 progeny per bulk.  You can add more or less it all depends 
on you.  

The more progeny you add to the bulks, the greater chance you will have of 
losing markers that are linked to your favorite gene.  The less progeny, the 
greater number of markers you will have.  I would start with eight and see 
what RAPDs you pull out.  If you need more, then make smaller bulks, if you 
need to week out potential RAPDs because you get too many, make your bulk 
population larger.

Good luck,

 

Paul "Goose" Ulanch

Dept. Biochem/Biophys
Texas A&M University
College Station, TX   77843-2128
(409) 847-9379
PULANCH@bioch.tamu.edu

From owner-rapd@net.bio.net Mon Oct 30 22:00:00 1995
Path: biosci!CORN.CSO.NIU.EDU!t80bad1
From: t80bad1@CORN.CSO.NIU.EDU (Brad A Didion)
Newsgroups: bionet.molbio.rapd
Subject: bulk segregant analysis
Date: 30 Oct 1995 09:36:08 -0800
Organization: BIOSCI International Newsgroups for Molecular Biology
Lines: 7
Sender: daemon@net.bio.net
Distribution: world
Message-ID: <Pine.3.89.9510301106.D7130-0100000@corn.cso.niu.edu>

We are considering using BSA to compare band phenotypes between two 
groups of animals with respect to an abnormality. The animals differ only 
for the trait as the genetic backgrounds are the same (i.e. within line).
How many template samples are to be represented per bulk? just curious.

Brad 


