Hi Frédéric,
The TAIR7 release contains a total of 32,041 genes including 26,819
nuclear-encoded protein-coding genes, 1054 nuclear genes encoding RNAs,
3,889 nuclear pseudogenes and transposon genes and 279 genes encoded by
the chloroplast and mitochondrial genomes.
Here's a citation for the TAIR7 genome release:
Swarbreck et al. (2008) The Arabidopsis Information Resource (TAIR):
gene structure and function annotation. Nucleic Acids Research
36:D1009-D1014
You can download it from http://arabidopsis.org/about/D1009.pdf
For the TAIR6 and TAIR7 releases there was no change to the assembly so
the size of the genome remains the same as for TIGR5. The 5 nuclear
chromosomes have a total size of 118,998 Mb as described for the TIGR5
release:
http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=15784138
Eva
Vigneault wrote:
>http://arabidopsis.org/portals/genAnnotation/genome_snapshot.jsp>> 115,409,949 bp (source unkown, but sometime in 2005)
> 119,186,497 bp (TIGR 2007)
> 134, 634,692 bp (TAIR 2007)
> 5 chromosomes
> 26,819 protein coding genes (on these 5 chr, according to TAIR 7.0)
>> These numbers only take into account the nuclear chromosomes.
>> Fred
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