Searching ".ace" sequences

Jaime Prilusky lsprilus at weizmann.weizmann.ac.il
Mon Aug 30 03:54:34 EST 1993


Is there a way of searching the acedb/aatdb... sequences "a la GCG's
findpatterns"?

Is there a mechanism for creating a set of those database sequences that
match (accordingly to a given mistmatch value) a provided short pattern?

If not present, we migth try to develop such a mechanism. Any suggestions
or guidelines are welcomed.

 Dr Jaime Prilusky, Head
 Bioinformatics Unit                 ! LSPRILUS at WEIZMANN.WEIZMANN.AC.IL
 Weizmann Institute of Science       ! fax: 972-8-344113
 76100 Rehovot - Israel              ! tel: 972-8-343456




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