files from 2-day course

Richard Durbin rd at mrc-lmb.cam.ac.uk
Mon May 23 06:26:22 EST 1994


Mary O'Callaghan and I gave a two day course last Thursday and Friday
on how to use ACEDB, and in particular how to edit in it, and adapt it
to other data.  In the process we made a number of miscellaneous files
and it seemed a good idea to make them available to others.  In
particular Sam might want to add at least some of them to his
documentation server.  They are available by ftp as course.tar.Z on
cele.mrc-lmb.cam.ac.uk in pub/acedb/ace2.  The examples all run with
the current public ace2 code and wspec -- sorry, that was just what
was easiest for us.  The archive contains:

	exercises	with answers
	new-database	script to make a new empty database with $ACEDB = pwd
	mini-db.ace	small database with examples of most types of data
	examples.ace	example ace file
	acediff/	info and examples for using acediff
	blast/		scripts for converting blast output to .ace files
	medline/	script for converting medline entries to .ace files
	editingmodels/	info and exercises on how to add to the models and 
			classes. Also includes a complete annotated minimal 
			set of models for ace2, containing only those tags
			used by the code, and briefly saying how they are 
			used.

There is a global README and a README in each subdirectory.

Richard




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