Conversion tools for ACeDB
Neal Dalton
nrd at scrapie.med.umn.edu
Wed Oct 12 10:05:13 EST 1994
I have been scrounging for tools to convert various formats, I'm still
looking for a medline to ACeDB converter. I was surprised that this
wasn't a FAQ, may this can be used to add a new one.
They may need some changes, since databases vary. If there are better
locations or other utilities, please let me know. I will post a
summary.
At ftp://weeds.mgh.harvard.edu/acedb_dev/utilities I found
blast2ace - Converts NCBI blast email server format
gb2ace - Comvert GenBank format (there are 2)
mapm2ace - Converts Mapmaker "map" or "print chromosomes"
sortpmap - Constructs physical map contigs in text
ace2go - Dumps classes from ACeDB and waisindexing the .ace-format
ace2nal - Translate Data from ACeDB Database to Relational Tables
At ftp://igd-ftp.dkfz-heidelberg.de/pub/igd-ted
opm2aces - OPM (Oject-Protocol Model) to ACeDB
ace2eers - Experimental translates ACeDB model files to .erd for ERDRAW
Neal
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