converting to .ace format

Danielle et Jean Thierry-Mieg mieg at kaa.crbm.cnrs-mop.fr
Thu Feb 8 06:50:47 EST 1996


acedb 4.2 now reads fasta format
4.1 does not i think (i can t remember if it does in fact)


fasta format is a file called

mydna.ace (other wise the file chooser won t prompt for it)

>ZC23A  junk that will be kept as a remark
atgc
aggttdtggttc
atgcATGCTGATGC
TGA
TTGGTGG

ace format differs by the title line:

DNA ZC23A
atgc
aggttdtggttc
atgcATGCTGATGC
TGA
TTGGTGG

that is it: read the file
there will be a new sequence called ZC23A
pick it and run genefinder
you can then exports the translation to blast it etc




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