xace 4.7 Protein Display

Doug Smith dsmith at ucsd.edu
Mon Apr 10 09:30:27 EST 2000


I note that the xace 4.7 Protein Display has a seqFeature type of column.
I presume this can be used for coordinate info on motifs and the like.

We are interested in such annotation for protein displays in DictyDB.

Is anyone doing this sort of thing in their ACEDB databases?
If so, could someone point to a few specific protein objects in
an ACEDB database that they have whereby they do this?

Even better, could you send me as an email attachment
a couple of .ace pieces of data for such Protein objects
and for the View object for the Protein class?

Thanks so much
  -Doug

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Douglas W. Smith
Professor of Biology                     UCSD Phone: 858-534-2620
Department of Biology, 0116              UCSD FAX:   858-534-7108
UCSD                                      Home FAX:   858-4573686
La Jolla, CA  92093-0116                  email:  dsmith at ucsd.edu
Home Page:  http://www.biology.ucsd.edu/others/dsmith/dnasys.html


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