performances

Danielle et jean Thierry-Mieg mieg at alpha.crbm.cnrs-mop.fr
Thu Apr 20 03:19:17 EST 2000


my database has 150 thousands sequences, i run it on a linux pc 350 MHz
i load all data in may be 10 minutes 

the index all work via hashing so insertion time is independant of size

what is a real kill is as Dave says XREF to many enties including
  ?Text entries which are all the same


could i have a copy of the models used and a sample of tyhe data file if they all look the
same

for example if you have a chromosoeme with very many balst hits
it can become heavy

what we do in the worm is to split the chromosome in cosmids and each has not so many blast hits

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