I am having a problem connecting to a database using xace:
I recall I may need to be in the directory above that holding the
database? Anyway if I try the following xace EXITS with the error
listed below.
One day I'll learn.
thanks,
Charles
[chauser at pandorina chuckDB]$ xace ACEDB
**** Program xace, compiled on: Sep 4 2001 13:36:41 ****
**** Using ACEDB 4_9f, compiled on: Sep 4 2001 13:32:02 ****
Code by: Jean Thierry-Mieg (CNRS, France) mieg at crbm.cnrs-mop.fr
Richard Durbin (Sanger Centre, UK) rd at sanger.ac.uk
Simon Kelley (Sanger Centre, UK) srk at sanger.ac.uk
Ed Griffiths (Sanger Centre, UK) edgrif at sanger.ac.uk
with ideas and code contributed from many laboratories including:
Montpellier:
Danielle Thierry-Mieg on the user interface
Michel Potdevin on more-info, biblio and debugging
Sanger:
Erik Sonnhammer for the blixem and dotter packages,
Friedemann Wobus on AQL and the graphic package
Ian Longden on graphics applications
DKFZ:
Otto Ritter on large data sets and the attach mechanism,
Detlef Wolf for quality control
Petr Kocab and Martin Senger for rpc layer;
LBL:
Franck Eeckman for the Mac port
John McCarthy on metadata and documentation,
Gary Aochi for the query interface
UC Berkeley Drosophila Genome group:
Cyrus Harmon also for the Mac port
Suzana Lewis on the graphic toolbox
University of British Columbia, Canada:
Richard Bruskiewich on the Microsoft Windows port.
and also:
Phil Green (genefinder), Jaime Prilusky (Mosaic help),
Sam Cartinhour and John Morris on documentation.
This list is only tentative, we apologise for omissions, and wish to
stress that these people and others have also helped fix all sorts
of details that cannot be listed individually.
Thank you et merci.
You may redistribute this program and database subject to the
conditions in the accompanying copyright file. Anyone interested in
maintaining an up-to-date version should contact one of the authors
at the above email addresses.
EXIT - Home database directory not found-you must give a parent
directory with subdirectories database/ and wspec/ as a command line
argument.
Specifics:
[chauser at pandorina chuckDB]$ ls -l
total 572
-rw-rw---- 1 chauser staff 38182 Aug 22 11:09 011802.ace
-rw-rw---- 1 chauser staff 505976 Aug 22 11:09 allele.ace
-rw-rw---- 1 chauser staff 2275 Aug 22 11:09 ccs1temp2.ace
-rw-rw---- 1 chauser staff 1133 Aug 22 11:09 contact_fix1.ace
-rw-rw---- 1 chauser staff 1157 Aug 22 11:09 contact_fix2.ace
-rw-rw---- 1 chauser staff 252 Aug 22 11:09 contact_fix3.ace
-rw-rw---- 1 chauser staff 1133 Aug 22 11:09 contact_fix.ace
drwxrwx--- 3 chauser staff 4096 Aug 22 11:45 database
-rw-rw---- 1 chauser staff 3255 Aug 22 11:09 test.ace
drwxrwx--- 2 chauser staff 4096 Aug 22 11:44 wspec
[chauser at pandorina chuckDB]$ ls -l ./database/
total 70000
-rw-rw---- 1 chauser staff 47 Aug 22 11:10 ACEDB.wrm
-rw-rw---- 1 chauser staff 10223616 Aug 22 11:10 block1.wrm
-rw-rw---- 1 chauser staff 20447232 Aug 22 11:10 block2.wrm
-rw-rw---- 1 chauser staff 40894464 Aug 22 11:10 block3.wrm
-rw-rw---- 1 chauser staff 726 Aug 22 11:10 database.map
-rw-rw---- 1 chauser staff 13456 Aug 22 11:58 log.wrm
drwxrwxrwx 2 chauser staff 4096 Aug 22 11:58 readlocks
[chauser at pandorina chuckDB]$ ls -l ./wspec/
total 468
-rw-rw---- 1 chauser staff 1499 Aug 22 11:11 cachesize.wrm
-rw-rw---- 1 chauser staff 533 Aug 22 11:11 checktype.wrm
-rw-rw---- 1 chauser staff 3177 Aug 22 11:11 classes.wrm
-rw-rw---- 1 chauser staff 225 Aug 22 11:11 classes.www
-rw-rw---- 1 chauser staff 666 Aug 22 11:11 copyright
-rw-rw---- 1 chauser staff 2019 Aug 22 11:11 database.wrm
-rw-rw---- 1 chauser staff 358 Aug 22 11:11 datainfo.wrm
-rw-rw---- 1 chauser staff 4668 Aug 22 11:11 displays.wrm
-rw-rw---- 1 chauser staff 4577 Aug 22 11:11 displays.wrm old
-rw-rw---- 1 chauser staff 1042 Aug 22 11:11 disptype.wrm
-rw-rw---- 1 chauser staff 955 Aug 22 11:11 GraphPackage
-rw-rw---- 1 chauser staff 93897 Aug 22 11:11 help.wrm
-rw-rw---- 1 chauser staff 256 Aug 22 11:46 layout.wrm
-rw-rw---- 1 chauser staff 422 Aug 22 11:11 layout.wrm~
-rw-rw---- 1 chauser staff 12882 Aug 22 11:11 models_112000.wrm
-rw-rw---- 1 chauser staff 13465 Aug 22 11:11 models.wrm
-rw-rw---- 1 chauser staff 11496 Aug 22 11:11 models.wrm.10
-rw-rw---- 1 chauser staff 12446 Aug 22 11:11 models.wrm_110600
-rw-rw---- 1 chauser staff 11588 Aug 22 11:11 models.wrm.7
-rw-rw---- 1 chauser staff 11543 Aug 22 11:11 models.wrm.8
-rw-rw---- 1 chauser staff 11714 Aug 22 11:11 models.wrm.9
-rw-rw---- 1 chauser staff 11487 Aug 22 11:11 models.wrm_last
-rw-rw---- 1 chauser staff 14473 Aug 22 11:11 models.wrm.old
-rw-rw---- 1 chauser staff 14502 Aug 22 11:11 models.wrm.save
-rw-rw---- 1 chauser staff 3447 Aug 22 11:11 options.wrm
-rw-rw---- 1 chauser staff 3107 Aug 22 11:11 options.wrm old
-rw-rw---- 1 chauser staff 791 Aug 22 11:11 passwd.wrm
-rw-rw---- 1 chauser staff 416 Aug 22 11:11 psfonts.wrm
-rw-rw---- 1 chauser staff 419 Aug 22 11:11 psfonts.wrm~
-rw-rw---- 1 chauser staff 4994 Aug 22 11:11 quovadis.wrm
-rw-rw---- 1 chauser staff 752 Aug 22 11:11 semkey.wrm
-rw-rw---- 1 chauser staff 4570 Aug 22 11:11 serverconfig.wrm
-rw-rw---- 1 chauser staff 1830 Aug 22 11:11 serverpasswd.wrm
-rw-rw---- 1 chauser staff 1177 Aug 22 11:11 server.wrm
-rw-rw---- 1 chauser staff 808 Aug 22 11:11 subclasses.wrm
-rw-rw---- 1 chauser staff 1607 Aug 22 11:11 sysclass.wrm
-rw-rw---- 1 chauser staff 2351 Aug 22 11:11 sysmodels.wrm
-rw-rw---- 1 chauser staff 2733 Aug 22 11:11 sysoptions.wrm
-rw-rw---- 1 chauser staff 3096 Aug 22 11:11 systags.wrm
-rw-rw---- 1 chauser staff 529 Aug 22 11:11 table.menu.wrm
-rw-rw---- 1 chauser staff 16048 Aug 22 11:11 tags.wrm
-rw-rw---- 1 chauser staff 77299 Aug 22 11:11 wspec.tar.Z
-rw-rw---- 1 chauser staff 1413 Aug 22 11:11 xfonts.wrm
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