xace connection to DB

Charles Hauser chauser at duke.edu
Wed Oct 16 02:43:06 EST 2002


I am having a problem connecting to a database using xace:

I recall I may need to be in the directory above that holding the
database?  Anyway if I try the following xace EXITS with the error
listed below.


One day I'll learn.

thanks,

Charles


[chauser at pandorina chuckDB]$ xace ACEDB

**** Program xace,  compiled on: Sep  4 2001 13:36:41 ****
**** Using  ACEDB 4_9f,  compiled on: Sep  4 2001 13:32:02 ****

Code by: Jean Thierry-Mieg (CNRS, France) mieg at crbm.cnrs-mop.fr
         Richard Durbin (Sanger Centre, UK) rd at sanger.ac.uk
         Simon Kelley (Sanger Centre, UK) srk at sanger.ac.uk
         Ed Griffiths (Sanger Centre, UK) edgrif at sanger.ac.uk
with ideas and code contributed from many laboratories including:
   Montpellier:
	 Danielle Thierry-Mieg on the user interface
	 Michel Potdevin on more-info, biblio and debugging
   Sanger:
	 Erik Sonnhammer for the blixem and dotter packages,
	 Friedemann Wobus on AQL and the graphic package
	 Ian Longden on graphics applications
   DKFZ:
	 Otto Ritter on large data sets and the attach mechanism,
	 Detlef Wolf for quality control
	 Petr Kocab and Martin Senger for rpc layer;
   LBL:
	 Franck Eeckman for the Mac port 
	 John McCarthy on metadata and documentation,
	 Gary Aochi for the query interface
   UC Berkeley Drosophila Genome group: 
	 Cyrus Harmon also for the Mac port 
	 Suzana Lewis on the graphic toolbox
University of British Columbia, Canada:
	 Richard Bruskiewich on the Microsoft Windows port.

   and also:
	 Phil Green (genefinder), Jaime Prilusky (Mosaic help),
	 Sam Cartinhour and John Morris on documentation.
 This list is only tentative, we apologise for omissions, and wish to 
 stress that these people and others have also helped fix all sorts
 of details that cannot be listed individually. 
 Thank you et merci.

You may redistribute this program and database subject to the
conditions in the accompanying copyright file.  Anyone interested in
maintaining an up-to-date version should contact one of the authors
at the above email addresses.



EXIT - Home database directory not found-you must give a parent
directory with subdirectories database/ and wspec/ as a command line
argument.







Specifics:

[chauser at pandorina chuckDB]$ ls -l
total 572
-rw-rw----    1 chauser  staff       38182 Aug 22 11:09 011802.ace
-rw-rw----    1 chauser  staff      505976 Aug 22 11:09 allele.ace
-rw-rw----    1 chauser  staff        2275 Aug 22 11:09 ccs1temp2.ace
-rw-rw----    1 chauser  staff        1133 Aug 22 11:09 contact_fix1.ace
-rw-rw----    1 chauser  staff        1157 Aug 22 11:09 contact_fix2.ace
-rw-rw----    1 chauser  staff         252 Aug 22 11:09 contact_fix3.ace
-rw-rw----    1 chauser  staff        1133 Aug 22 11:09 contact_fix.ace
drwxrwx---    3 chauser  staff        4096 Aug 22 11:45 database
-rw-rw----    1 chauser  staff        3255 Aug 22 11:09 test.ace
drwxrwx---    2 chauser  staff        4096 Aug 22 11:44 wspec

[chauser at pandorina chuckDB]$ ls -l ./database/
total 70000
-rw-rw----    1 chauser  staff          47 Aug 22 11:10 ACEDB.wrm
-rw-rw----    1 chauser  staff    10223616 Aug 22 11:10 block1.wrm
-rw-rw----    1 chauser  staff    20447232 Aug 22 11:10 block2.wrm
-rw-rw----    1 chauser  staff    40894464 Aug 22 11:10 block3.wrm
-rw-rw----    1 chauser  staff         726 Aug 22 11:10 database.map
-rw-rw----    1 chauser  staff       13456 Aug 22 11:58 log.wrm
drwxrwxrwx    2 chauser  staff        4096 Aug 22 11:58 readlocks

[chauser at pandorina chuckDB]$ ls -l ./wspec/   
total 468
-rw-rw----    1 chauser  staff        1499 Aug 22 11:11 cachesize.wrm
-rw-rw----    1 chauser  staff         533 Aug 22 11:11 checktype.wrm
-rw-rw----    1 chauser  staff        3177 Aug 22 11:11 classes.wrm
-rw-rw----    1 chauser  staff         225 Aug 22 11:11 classes.www
-rw-rw----    1 chauser  staff         666 Aug 22 11:11 copyright
-rw-rw----    1 chauser  staff        2019 Aug 22 11:11 database.wrm
-rw-rw----    1 chauser  staff         358 Aug 22 11:11 datainfo.wrm
-rw-rw----    1 chauser  staff        4668 Aug 22 11:11 displays.wrm
-rw-rw----    1 chauser  staff        4577 Aug 22 11:11 displays.wrm old
-rw-rw----    1 chauser  staff        1042 Aug 22 11:11 disptype.wrm
-rw-rw----    1 chauser  staff         955 Aug 22 11:11 GraphPackage
-rw-rw----    1 chauser  staff       93897 Aug 22 11:11 help.wrm
-rw-rw----    1 chauser  staff         256 Aug 22 11:46 layout.wrm
-rw-rw----    1 chauser  staff         422 Aug 22 11:11 layout.wrm~
-rw-rw----    1 chauser  staff       12882 Aug 22 11:11 models_112000.wrm
-rw-rw----    1 chauser  staff       13465 Aug 22 11:11 models.wrm
-rw-rw----    1 chauser  staff       11496 Aug 22 11:11 models.wrm.10
-rw-rw----    1 chauser  staff       12446 Aug 22 11:11 models.wrm_110600
-rw-rw----    1 chauser  staff       11588 Aug 22 11:11 models.wrm.7
-rw-rw----    1 chauser  staff       11543 Aug 22 11:11 models.wrm.8
-rw-rw----    1 chauser  staff       11714 Aug 22 11:11 models.wrm.9
-rw-rw----    1 chauser  staff       11487 Aug 22 11:11 models.wrm_last
-rw-rw----    1 chauser  staff       14473 Aug 22 11:11 models.wrm.old
-rw-rw----    1 chauser  staff       14502 Aug 22 11:11 models.wrm.save
-rw-rw----    1 chauser  staff        3447 Aug 22 11:11 options.wrm
-rw-rw----    1 chauser  staff        3107 Aug 22 11:11 options.wrm old
-rw-rw----    1 chauser  staff         791 Aug 22 11:11 passwd.wrm
-rw-rw----    1 chauser  staff         416 Aug 22 11:11 psfonts.wrm
-rw-rw----    1 chauser  staff         419 Aug 22 11:11 psfonts.wrm~
-rw-rw----    1 chauser  staff        4994 Aug 22 11:11 quovadis.wrm
-rw-rw----    1 chauser  staff         752 Aug 22 11:11 semkey.wrm
-rw-rw----    1 chauser  staff        4570 Aug 22 11:11 serverconfig.wrm
-rw-rw----    1 chauser  staff        1830 Aug 22 11:11 serverpasswd.wrm
-rw-rw----    1 chauser  staff        1177 Aug 22 11:11 server.wrm
-rw-rw----    1 chauser  staff         808 Aug 22 11:11 subclasses.wrm
-rw-rw----    1 chauser  staff        1607 Aug 22 11:11 sysclass.wrm
-rw-rw----    1 chauser  staff        2351 Aug 22 11:11 sysmodels.wrm
-rw-rw----    1 chauser  staff        2733 Aug 22 11:11 sysoptions.wrm
-rw-rw----    1 chauser  staff        3096 Aug 22 11:11 systags.wrm
-rw-rw----    1 chauser  staff         529 Aug 22 11:11 table.menu.wrm
-rw-rw----    1 chauser  staff       16048 Aug 22 11:11 tags.wrm
-rw-rw----    1 chauser  staff       77299 Aug 22 11:11 wspec.tar.Z
-rw-rw----    1 chauser  staff        1413 Aug 22 11:11 xfonts.wrm






---





More information about the Acedb mailing list