From rcheung at bcgsc.ca Thu Jun 9 11:47:34 2005 From: rcheung at bcgsc.ca (Renee Cheung) Date: Mon Jun 13 08:12:37 2005 Subject: [Acedb-soft] Parse function returns nothing Message-ID: Hi all, I am running into a strange problem with AceDB. I had just set up a development version of our current intranet site that runs as a wrap around of AceDB. There seems to be some write problem with the development site. However, the "write to database" function is shared between production and development. Production seems to have no problems in writing to the database, but development always return an error. This is what I've tracked it down to be: - parse($parseStatement) returns nothing - no Ace->error is returned either I'm stumped as to why this is happening. If you can give me any suggestions, I'd very much appreciate it. Thanks! Renee Co-op Student Bioinformatics Genome Science Center -------------- next part -------------- An HTML attachment was scrubbed... URL: http://iubio.bio.indiana.edu/bionet/mm/acedb/attachments/20050609/e72a7af7/attachment.html From edgrif at sanger.ac.uk Mon Jun 13 08:41:26 2005 From: edgrif at sanger.ac.uk (Ed Griffiths) Date: Mon Jun 13 09:35:35 2005 Subject: [Acedb-soft] Parse function returns nothing In-Reply-To: References: Message-ID: Renee, > I am running into a strange problem with AceDB. I had just set up a > development version of our current intranet site that runs as a wrap > around of AceDB. > > There seems to be some write problem with the development site. > However, the "write to database" function is shared between production > and development. Production seems to have no problems in writing to the > database, but development always return an error. This is what I've > tracked it down to be: > > - parse($parseStatement) returns nothing > - no Ace->error is returned either > > I'm stumped as to why this is happening. If you can give me any > suggestions, I'd very much appreciate it. Thanks! I'm not sure I completely understand what you say above but it sounds a bit like you may be having two processes trying to get write access to a single acedb database at the same time. Unfortunately you cannot do this, only one process can have direct (i.e. not via the acedb server) write access at a time. Can you check whether this is the case. Ed -- ------------------------------------------------------------------------ | Ed Griffiths, Acedb development, Informatics Group, | | The Morgan Building, Sanger Institute, Wellcome Trust Genome Campus | | Hinxton, Cambridge CB10 1HH | | | | email: edgrif@sanger.ac.uk Tel: +44-1223-496844 Fax: +44-1223-494919 | ------------------------------------------------------------------------ From biosci at net.bio.net Wed Jun 15 16:56:48 2005 From: biosci at net.bio.net (BIOSCI Administrator) Date: Thu Jun 16 03:12:50 2005 Subject: [Acedb-soft] BIOSCI/Bionet has a new home Message-ID: <200506152156.j5FLumx13052@net.bio.net> Dear ACEDB-SOFT readers, BIOSCI/Bionet is the long-running Biology news and discussion groups. The management of these groups has been handled ably at MRC/Rosalind Franklin Centre for several years now. They are turning over management to me, Don Gilbert, at Indiana University Biology department. The MRC/RFC folks deserve our thanks for their devotion to maintaining this useful and unique biology news service. Web access continues at http://www.bio.net/ Find there ACEDB-SOFT links to Read/Subscribe/Post messages. E-mail postings continue to be through acedb @ net.bio.net The new home is at IUBio Archive, iubio.bio.indiana.edu, which I've maintained for over 15 years. The names net.bio.net and www.bio.net, and their related BIOSCI roles continue to work. Please keep using these bio.net addresses, they will continue when the host computer changes. There may be some hiccups over the coming weeks as the new BIOSCI home gets a work out. Please bear with us, and let us know if problems persist longer. Regards, Don Gilbert Biology Dept., Indiana University Bloomington, Indiana, USA 47405 BIOSCI help mail: biosci-help @ net.bio.net ---------------------------------------------- From rcheung at bcgsc.ca Thu Jun 9 11:47:34 2005 From: rcheung at bcgsc.ca (Renee Cheung) Date: Mon Jun 27 18:38:30 2005 Subject: [Acedb-soft] Parse function returns nothing Message-ID: Hi all, I am running into a strange problem with AceDB. I had just set up a development version of our current intranet site that runs as a wrap around of AceDB. There seems to be some write problem with the development site. However, the "write to database" function is shared between production and development. Production seems to have no problems in writing to the database, but development always return an error. This is what I've tracked it down to be: - parse($parseStatement) returns nothing - no Ace->error is returned either I'm stumped as to why this is happening. If you can give me any suggestions, I'd very much appreciate it. Thanks! Renee Co-op Student Bioinformatics Genome Science Center -------------- next part -------------- An HTML attachment was scrubbed... URL: http://www.bio.net/bionet/mm/acedb/attachments/20050609/e72a7af7/attachment-0002.html From edgrif at sanger.ac.uk Mon Jun 13 08:41:26 2005 From: edgrif at sanger.ac.uk (Ed Griffiths) Date: Mon Jun 27 18:38:30 2005 Subject: [Acedb-soft] Parse function returns nothing In-Reply-To: References: Message-ID: Renee, > I am running into a strange problem with AceDB. I had just set up a > development version of our current intranet site that runs as a wrap > around of AceDB. > > There seems to be some write problem with the development site. > However, the "write to database" function is shared between production > and development. Production seems to have no problems in writing to the > database, but development always return an error. This is what I've > tracked it down to be: > > - parse($parseStatement) returns nothing > - no Ace->error is returned either > > I'm stumped as to why this is happening. If you can give me any > suggestions, I'd very much appreciate it. Thanks! I'm not sure I completely understand what you say above but it sounds a bit like you may be having two processes trying to get write access to a single acedb database at the same time. Unfortunately you cannot do this, only one process can have direct (i.e. not via the acedb server) write access at a time. Can you check whether this is the case. Ed -- ------------------------------------------------------------------------ | Ed Griffiths, Acedb development, Informatics Group, | | The Morgan Building, Sanger Institute, Wellcome Trust Genome Campus | | Hinxton, Cambridge CB10 1HH | | | | email: edgrif@sanger.ac.uk Tel: +44-1223-496844 Fax: +44-1223-494919 | ------------------------------------------------------------------------ From biosci at net.bio.net Wed Jun 15 16:56:48 2005 From: biosci at net.bio.net (BIOSCI Administrator) Date: Mon Jun 27 18:38:30 2005 Subject: [Acedb-soft] BIOSCI/Bionet has a new home Message-ID: <200506152156.j5FLumx13052@net.bio.net> Dear ACEDB-SOFT readers, BIOSCI/Bionet is the long-running Biology news and discussion groups. The management of these groups has been handled ably at MRC/Rosalind Franklin Centre for several years now. They are turning over management to me, Don Gilbert, at Indiana University Biology department. The MRC/RFC folks deserve our thanks for their devotion to maintaining this useful and unique biology news service. Web access continues at http://www.bio.net/ Find there ACEDB-SOFT links to Read/Subscribe/Post messages. E-mail postings continue to be through acedb @ net.bio.net The new home is at IUBio Archive, iubio.bio.indiana.edu, which I've maintained for over 15 years. The names net.bio.net and www.bio.net, and their related BIOSCI roles continue to work. Please keep using these bio.net addresses, they will continue when the host computer changes. There may be some hiccups over the coming weeks as the new BIOSCI home gets a work out. Please bear with us, and let us know if problems persist longer. Regards, Don Gilbert Biology Dept., Indiana University Bloomington, Indiana, USA 47405 BIOSCI help mail: biosci-help @ net.bio.net ----------------------------------------------