Genbank

Robert Robbins rrobbins at WELCHGATE.WELCH.JHU.EDU
Wed Jun 9 13:42:20 EST 1993



On 2 Jun 1993, BillBerry asked about ftp sites for obtaining genbank.

An archie query produced the following results.  I expect that something
useful should be located at one or more of these ftp sites...

========================================================================


Host biom3.univ-lyon1.fr

    Location: /pub/acnuc
      DIRECTORY drwxr-xr-x        512  Apr 27 14:42  genbank

Host calpe.psc.edu

    Location: /biomed
      DIRECTORY drwxr-xr-x       2048  Jan  6 09:58  genbank

Host calvin.cs.mcgill.ca

    Location: /archie/logs
           FILE -rw-r--r--       1463  Jul 22 1992  genbank.bio.net.log

Host cnam.cnam.fr

    Location: /pub/Archives/comp.archives/auto
      DIRECTORY drwxr-xr-x        512  Feb  5 1992  bionet.molbio.genbank
    Location: /pub/Archives/comp.archives/auto/bionet.molbio.genbank
           FILE -rw-r--r--       1135  Dec 25 1991  GenPept-release-70-available-for-FTP-from-genbank-bio-net
           FILE -rw-r--r--       1812  Dec 23 1991  New-idx-files-for-GenBank-release-70
           FILE -rw-r--r--       1302  Jan  8 1992  REBASE-9201-available-for-ftp-from-genbank-bio-net

Host cs.dal.ca

    Location: /comp.archives/bionet.general
           FILE -r--r--r--       1470  Oct 12 1991  statistics-on-genbank-pir-etc-required
    Location: /comp.archives
      DIRECTORY drwxrwxrwx       1536  Sep 19 1992  bionet.molbio.genbank
    Location: /comp.archives/bionet.molbio.genbank
           FILE -r--r--r--       1510  Sep 19 1992  final-ig-genbank-release-73-ready-for-ftp-from-genbank-bio-net
           FILE -r--r--r--       1745  Oct 13 1991  genbank-duplicate-sequences
           FILE -r--r--r--        797  Oct 25 1991  genbank-floppy-release-69-available-for-ftp
           FILE -r--r--r--       2879  Oct  5 1991  genbank-release-69-news
           FILE -r--r--r--        847  Sep  7 1991  genbank-software-clearinghouse
           FILE -r--r--r--       1688  Sep 19 1991  genbank-stats
           FILE -r--r--r--        880  Dec 23 1991  genpept-release-70-available-for-ftp-from-genbank-bio-net
           FILE -r--r--r--        942  Jul 24 1992  limb-3-0-available-for-ftp-from-genbank-bio-net
           FILE -r--r--r--       1555  Dec 21 1991  new-idx-files-for-genbank-release-70
           FILE -r--r--r--       1194  Aug 20 1991  rebase-9108-available-for-ftp-from-genbank.bio.net
           FILE -r--r--r--       1191  Sep  7 1991  rebase-9109-available-for-ftp-from-genbank.bio.net
           FILE -r--r--r--       1022  Sep 28 1991  rebase-9110-available-for-ftp-from-genbank.bio.net
           FILE -r--r--r--       1048  Jan  3 1992  rebase-9201-available-for-ftp-from-genbank-bio-net
           FILE -r--r--r--       1079  Mar  4 1992  rebase-9203-available-for-ftp-from-genbank-bio-net

Host dftsrv.gsfc.nasa.gov

    Location: /alex/csh-alex
           FILE -rw-r--r--        262  Aug  8 1990  genbank
    Location: /alex/dcl-alex
           FILE -rw-r--r--        262  Aug  9 1990  genbank.txt

Host fly.bio.indiana.edu

    Location: /Incoming
           FILE -rw-r--r--       2638  May  7 14:45  genbank-submit.info
    Location: /help
           FILE -rw-r--r--       5817  May 14 1991  genbank-ftp.txt
           FILE -rw-r--r--       1713  Nov 11 00:00  genbank-ig.adieu
           FILE -rw-r--r--       1484  Jan  8 16:33  genbank-mirror.info
           FILE -rw-r--r--       3027  May 14 1991  genbank-submit.txt
    Location: /help/uh-server
           FILE -rw-r--r--       4159  May 14 1991  genbank-server.info
    Location: /molbio/other
      DIRECTORY drwxr-xr-x        512  Mar 26 10:18  genbank
    Location: /molbio/other/genbank
           FILE -rw-r--r--     276859  May 14 1991  genbank-release.text
           FILE -rw-r--r--       7830  May 14 1991  genbank.bison
           FILE -rw-r--r--      21112  May 14 1991  genbank.form
           FILE -rw-r--r--       1811  May 14 1991  genbank.ftp
    Location: /molbio/vax
           FILE -rw-r--r--     727145  Aug  1 1991  submit-genbank.bck_z
           FILE -rw-r--r--       5182  Jul 31 1991  submit-genbank.readme
    Location: /usenet/bionet/molbio
      DIRECTORY drwxr-xr-x       1536  May 27 01:13  genbank
    Location: /util/gopher
           FILE -rw-r--r--       9099  Feb 24 1992  iubio-gopher.genbank
    Location: /util/wais/IUBio-sources
           FILE -rw-r--r--       2054  Nov  4 00:00  IUBio-genbank.src
    Location: /util/wais/wais-sources
           FILE -rw-r--r--       2045  Nov  4 00:00  IUBio-genbank.src
           FILE -rw-r--r--        595  Apr 30 1992  bionic-genbank-software.src

Host ftp.uni-kl.de

    Location: /pub/bio/molbio
      DIRECTORY drwxrwxr-x        512  Feb 23 12:31  genbank
    Location: /pub/bio/molbio/genbank
           FILE -rw-rw-r--      65214  Dec  9 09:23  genbank.dir
    Location: /pub/bio/molbio/iubio
           FILE -rw-rw-r--       3027  Dec  9 09:25  genbank-submit.txt

Host genome.wi.mit.edu

    Location: /wais-sources
           FILE -rw-rw-r--       2045  Mar 30 13:13  IUBio-genbank.src
           FILE -rw-rw-r--        595  Mar 30 13:13  bionic-genbank-software.src

Host grasp1.univ-lyon1.fr

    Location: /pub/unix/gopher
           FILE -r--r--r--       9099  Jul 31 1992  iubio-gopher.genbank
    Location: /pub/usenet-stats/bionet
           FILE -rw-r--r--       1145  Apr 11 08:37  bionet.molbio.genbank
           FILE -rw-r--r--        593  Apr 11 08:37  bionet.molbio.genbank.updates

Host ics.uci.edu

    Location: /pub/machine-learning-databases/access-lists/other-repository-info
           FILE -rw-rw-r--       1608  Aug  8 1990  genbank-info
           FILE -rw-rw-r--     276859  Aug  8 1990  genbank-text

Host ncbi.nlm.nih.gov

    Location: /
      DIRECTORY drwxrwxr-x       1024  May 10 20:31  ncbi-genbank
    Location: /repository/taxonomies
           FILE -rw-r--r--     349908  Dec 17 19:25  genbank

Host nic.sura.net

    Location: /pub/archie/sites/local
           FILE -rw-rw-r--      25220  Apr  3 12:14  genbank.bio.net.Z

Host pinus.slu.se

    Location: /pub/molbio
      DIRECTORY drwxrwxr-x        512  Jan 21 23:18  genbank
    Location: /pub/molbio/genbank
           FILE -r--r--r--     276859  May 14 1991  genbank-release.text
           FILE -r--r--r--       4298  May 14 1991  genbank.bison.Z
           FILE -r--r--r--       8333  May 14 1991  genbank.form.Z
           FILE -r--r--r--       1274  May 14 1991  genbank.ftp.Z
    Location: /pub/molbio/other
      DIRECTORY drwxrwxr-x        512  Jan 21 23:18  genbank
    Location: /pub/molbio/other/genbank
           FILE -r--r--r--     276859  May 14 1991  genbank-release.text
           FILE -r--r--r--       4298  May 14 1991  genbank.bison.Z
           FILE -r--r--r--       8333  May 14 1991  genbank.form.Z
           FILE -r--r--r--       1274  May 14 1991  genbank.ftp.Z
    Location: /pub/molbio/search
           FILE -r--r--r--       7566  Sep  4 1991  blast-genbank.server.Z
    Location: /pub/molbio/vax
           FILE -r--r--r--     727145  Aug  1 1991  submit-genbank.bck_z.Z
           FILE -r--r--r--       5182  Jul 31 1991  submit-genbank.readme
    Location: /pub/wais/IUBio-hacks/IUBio-sources
           FILE -r--r--r--       1337  Nov  4 00:00  IUBio-genbank.src.Z

Host pith.uoregon.edu

    Location: /pub/Sun4/lib/wais-sources
           FILE -rw-r--r--        520  Dec  5 1991  bionic-genbank-software.src

Host plaza.aarnet.edu.au

    Location: /archie/listings
           FILE -r--r--r--      25220  Apr  3 12:14  genbank.bio.net.Z
    Location: /micros/mac/umich/misc/biology
           FILE -r--r--r--     210503  Jan 31 1992  genbanksearch.sit.hqx
    Location: /micros/mac/umich/misc/molbio
           FILE -r--r--r--     210503  Jan 31 1992  genbanksearch.sit.hqx

Host relay.cs.toronto.edu

    Location: /pub/emv/wais
           FILE -rw-r--r--       3306  Aug 30 1991  genbank-journals

Host sunbcd.weizmann.ac.il

    Location: /pub/databases
      DIRECTORY drwxr-xr-x       1024  Oct 27 1992  ncbi-genbank
    Location: /pub/software/vax
           FILE -r--r--r--     727145  Aug  1 1991  submit-genbank.bck_z
           FILE -r--r--r--       5182  Jul 31 1991  submit-genbank.readme

Host sunsite.unc.edu

    Location: /pub/academic/biology/molbio
      DIRECTORY drwxr-xr-x        512  Feb  7 21:37  genbank
    Location: /pub/academic/biology/molbio/other
      DIRECTORY drwxr-xr-x        512  Feb  5 06:51  genbank
    Location: /pub/academic/biology/molbio/other/genbank
           FILE -r--r--r--     276859  May 14 1991  genbank-release.text
           FILE -r--r--r--       7830  May 14 1991  genbank.bison
           FILE -r--r--r--      21112  May 14 1991  genbank.form
           FILE -r--r--r--       1811  May 14 1991  genbank.ftp
    Location: /pub/academic/biology/molbio/vax
           FILE -r--r--r--     727145  Aug  1 1991  submit-genbank.bck_z
           FILE -r--r--r--       5182  Jul 31 1991  submit-genbank.readme

Host think.com

    Location: /think
      DIRECTORY drwxrwxr-x        512  Aug 28 1992  genbank

Host turbo.bio.net

    Location: /pub/BIOSCI
      DIRECTORY drwxrwxr-x       1024  Nov  7 00:00  GENBANK-BB

Host world.std.com

    Location: /src/network/wais-8-b4/wais-sources
           FILE -rw-r--r--        595  May 23 1992  bionic-genbank-software.src
    Location: /src/network/wais-8-b5/wais-sources
           FILE -rw-r--r--     


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