>Dear Networkers, has anyone already mapped marker m249 (chrs 3) to a YAC? If s
>o are they prepared to share the information as to which YAC(s) is/are relevent
>? Please reply either to the network, or K445711 at czhrzu1a (bitnet address)
> Thank you in advance, Alan Slusarenko
Alan,
If you haven't looked, the AAtDB gopher server contains several entries on
m249 that may be of interest. In addition to the information that I've
appended, there a several entries in the database on the two-point mapping
data. However, I don't see any YAC hybridizations.
John Morris
Curator,
MGH Arabidopsis Database Project
Strain : "CD1-42"
Ordering_info Order_strain_from Ohio_State
Features Locus m249
Probe m249
Type Cloned_DNA
Image meyerowitz-lambda-chr3
Probe : "m249"
Strain CD1-42
Locus m249
RFLP_mapping Meyerowitz lab EcoRI Nied_x_Col polymorphic
SacI Nied_x_Col polymorphic
XbaI Nied_x_Col polymorphic
XhoI Nied_x_Col
dominant/recessive
(extra band(s))
Col_x_Land
dominant/recessive
(extra band(s))
BglII Col_x_Land polymorphic
Nied_x_Land polymorphic
Goodman lab HindIII Col_x_Land polymorphic but
not used
BclI Col_x_Land polymorphic but not
used
EcoRI Col_x_Land polymorphic but not
used
ClaI Col_x_Land polymorphic but not
used
used for map
DraI Col_x_Land polymorphic but not
used
BglII Col_x_Land polymorphic but not
used
XbaI Col_x_Land not polymorphic
Data Mapped_bands 1L 2L 3C 4C 5C ClaI
Autorad m249
Locus : "m249"
Type RFLP
Name Probe_desc random lambda clone
Molecular_information Probe m249
Image m249
Strain CD1-42
Map Genetic gMap Unified-III 66.7 1.48
Visible-III 73.6 1.04
1.0_Integrated-III 65.4 0.28
Scolnik_All-III 59.5 0.68
Position_ambiguous See Reiter et al PNAS 89:1477; approx. 3.5 cM
from r268
Mapping_data F2_data Goodman_3
Meyerowitz_3
RI_data Scolnik_3
Dean_RI_3
2Point g4708-m249-1398
GS-KB6-m249-1411
g6220-m249-1421
abi3-m249-1430
BWS12-m249-1441
m433-m249-1450
g17287-m249-1459
GAP-A-m249-1467
g2440-m249-1476
gl1-m249-1482
pAt3-89.1-m249-1487
PB3-m249-1498
m249-g4117-1509
m249-g2534-1510
m249-g4564-b-1511
m249-g4014-1512
m249-g17811-1513
m249-g4125-1514
m249-g2606-1515
m249-tt5-1516
m249-g2778-1517
m249-XDB-G-1518
m249-g19826-1519
m249-g5966-1520
dwf1-m249-2289
m105-m249-2298
m255-m249-2308
m433-m249-2310
KG-23-m249-2316
g2440-m249-2320
gl1-m249-2324
m281b-m249-2330
m249-CAB11-2335
m249-csr-2336
m249-m409-2337
m249-m576-2338
m249-apZL-2339
m249-m457-2340
m249-ap3-2341
m249-g4014-2342
m249-Syac1G12-2343
m249-m115-2344
m249-m339-2345
m249-u2r3-2346
m249-pCIT1210-2347
m249-m460-2348
m249-m424-2349
axr2-m249-262