Latest RFLP map generated on the Ler x Col RI lines

ARABIDOPSIS arabidopsis.arabidopsis at bbsrc.ac.uk
Thu Jun 29 06:47:19 EST 1995


RFLP map generated on Landsberg erecta x Columbia recombinant 
inbred lines.

June 29 ,1995. 
462 markers

The maps for Chromosomes 1, 2, and 3 have been generated completely using
"Mapmaker". Chromosome 4 is almost entirely based on the physical map data from 
Renate Schmidt and her co-workers. The map for Chromosome 5 is partly based 
on the physical map data.

Clare Lister and Caroline Dean,
John Innes Centre, Norwich, UK
arabidopsis at bbsrc.ac.uk

Any enquiries about markers on the map should be directed to: 
ARABIDOPSIS at BBSRC.AC.UK

Please send your segregation data to:
LISTER at BBSRC.AC.UK
-------------------------------------------------------------

Chromosome 1

Markers         Distance (cM)
RS10             0
nga59            1.9
PVV4             1.9
ve001            1.9
ACC2             1.9
O846A            4
ATEAT1           5.4
agp16            6.1
SEP4E            6.9
ve002            6.9
g4715a           7.7
m488             7.7
ve004            7.7
mi372            7.7
ve003            7.7
agp102           7.7
GT45-1           9
PAI1             9
apx1A           10.3
mi100           12.1
phyA            12.4
mi443           12.7
m241A           12.7
hma2            13
ve005           13.3
nga63           14.2
NCC1            15
ATTS0477        15.1
pC1             15.1
pC2             16.9
ve006           18.7
O818            21.1
EG17G9          21.7
g3786           22.7
ve007           23.7
mi348           26.3
mi113           27.3
Y3              27.3
ve036           27.8
mi203           31.6
pC3             31.6
pFNR            35.5
g3829           41
m235            44.5
ve037           48.4
mi265           51.7
CEG1            52
mi163           52.3
ve095           53.4
L3              55.6
ve008           55.7
ve094           55.9
mi111           56.1
mi192           56.1
mi15            56.1
mi62            56.1
mi116           57.1
nga248          57.1
CATTS0392       62.5
ACBP            65.5
UFO             68.3
ve009           71.7
m254A           72.2
m253            73.2
P39B2T7         73.8
ve010           74.4
mi423a          76.1
DD10            77.2
RPS18B          77.8
mi63            79.4
mi19            80.4
mi342           81.4
intel1-1        84.6
mi133           86.2
GAPB            86.2
mi72            88.5
GRF2            88.5
GRF4            90.4
GRF1            97.6
mi291a         102.6
mi441          103.6
mi208          104.1
mi106          104.6
p4             105.7
m213           108.4
spl4           111.3
Lox1           114.2
nga128         114.4
nga280         114.6
mi209          114.8
hma1           114.8
mi303          115.3
M81A7T7        115.3
B34            117
mi304          117.9
mi259          117.9
mi230          117.9
mi408          117.9
FD             117.9
g4026          118.4
ATHGENEA       120.3
mi353          123.2
mi324          123.2
MW1            123.2
mi424          124.9
GT13-1         124.9
m315           129.1
mi185          134.6
mi193          134.6
pCITf117       136.1
g4552          136.6
Tag1           142.1
Athb13         143.7
mi462          145.3
mi103          146.3
m453A          147
PKNAT2-2       147
nga111         149.2
mi425          151.6
PR5            151.6
petE           151.6
z13G           151.6
I6             152.9
ATHATPASE      153.6
pPC8.94        153.6
m532           153.6
ADH            154.2
ve011          154.8
agp64          156.1
m132A          158.7
g17311         159.2
mi157          160.2
ve043          160.7
pAtT32-CX      169.1
        
134 markers     


Chromosome 2

Markers Distance (cM)
Tel2N            0
NOR2             0
RNS1             0.1
ve012           10.5
mi320           12.7
AtGST2B         13.5
m246            14.1
m497A           16.7
g4553           17.6
mi310           21.2
ve013           21.2
mi421           21.8
mi444           21.8
g4532           22.4
SEP2A           25.1
g4133           26.2
PR1             29.2
mi398           31.8
B33             35.9
m216            35.9
mi139           37.6
mi148           38.7
mi238           41.4
pGC1            41.7
m251            42
O802F           42
g6842           48.4
GPA1            48.4
B68             51.3
er              51.3
pGC2            57.4
mi54            58.4
ve014           59.4
m220            59.9
SEP5B           62.2
m283C           62.2
ve096           64.7
PR21            69.7
spl3            71.7
DsG1            71.7
ve015           71.7
mi277           72.2
ve016           72.3
z9Y             72.5
g17288          72.7
m323            72.7
um579B          74.4
ve017           74.4
sam3            74.7
ve018           75
nga168          78.5
O5841           78.5
g4514           80
m429            80
LTP             81
BHB             81
m336            83.6
ve019           86.2
mi473           86.8
AtGST6          88.3
mi455           88.3
mi79a           88.3
pAtT51          90.4
SG5             93.2
Athb7           94.8
GLU2            99.1
        
66 markers      


Chromosome 3

Markers Distance
Athb3            0
nga32            1.2
mi74b            1.2
mi199            2.2
nga172           2.2
mi172            3.8
GAPC             3.8
m583             8.4
mi403            9.6
mi355            9.6
Ms4              9.6
g4523           11.5
nga126          13.1
mi357           13.1
mi467           13.7
apx1B           14.7
JGB3            16.6
mi207           18.9
MS2             19.1
ATHCHIB         19.4
ghc1            19.4
nga162          21.2
mi289           23.1
GT51-1          23.3
g4708           23.6
m228            23.6
ve039           24.6
mi339           24.6
sAt2105b        31.1
m560B2          34.2
O4023           35
m105            36.7
mi142           37.3
mi268           39
AtDMC1          41.9
mi386           46.3
mi225           47.5
g4711           48.6
GAPA            56
ve020           57.1
mi178           58.2
mi287           58.2
um579C          59.3
B52             62.8
GL1             64.6
DD2             68.2
mi413           68.2
mi358           70.8
mi79b           71.3
ve021           76.9
g4117           79.9
m249            79.9
O97B1           85.4
I18             92.5
g4564b          93.9
g4014           97
m457           101.3
mi456          102.4
ve042          106.6
ve022          108.3
SG1            108.9
t94            110.2
spl5           113.5
AT103          113.8
g2778          114.1
BGL1           114.1
spl1           117.7
m424           121.8
agp29          122.4
nga6           123.3
nga112         125.3
TSA1           133.7
tai224         142.9
        
73 markers      


Chromosome 4

Markers Distance
NOR4            0
BIO217          1.3
mi51            1.3
mi204           4.5
mi122           5
g3843           6.6
I41G            7.3
mi301           8.7
Ms2            10.8
mi390          10.8
Ms5            10.8
TWN1           10.8
ve023          10.8
GT148          11.5
app            13.9
Gsl-ohp        18.9
GA1            23.5
AtGST2A        23.7
petC           26.8
m448A          27.8
mi233          27.8
g2616          28.3
mi306          28.3
BIO200         28.8
m506           29.3
nga12          29.8
mi87           30.8
mi167          31.3
m456A          31.9
nga8           35
RPS18C         38.3
pCITf3         38.8
H2761          40.3
m518A          40.3
BIO206        45.7
pCITd23       48
HGL19         48
g4108         51.2
mi465         53.6
MT2           55.5
mi128         57.4
g6837         58.5
g2620         58.5
SHcyH-1       58.8
mi30          59
mi279         59.5
CD3-44        60
g10086        60.5
g4564a        60.5
m326          61.5
ve024         61.5
mi198         62
mi260         64.1
m226          66.7
g13683        66.7
RPp5          66.7
C18a          66.7
g4539         67.2
mi112         67.7
mi330         67.7
g3845         68.2
mi32          70.4
AG            72.6
g19838        72.6
pCITd71       73.5
g3883         73.5
JGB9          75
A20           77.4
mi422         79.8
mi475         82.6
agp66         83.7
SEP2B         84.2
RPS2          86.2
m600          87.2
PG11          87.4
DD1           87.7
mi123         87.9
mi232         89
RLK5          89
AIM1          90.9
PRHA          94.6
g8300         95.8
mi431         96.9
O6455         97.9
pCITd104      97.9
g3088         97.9
pCITd99      102.1
pCITd76      102.1
m214         106
AP2          110.3
z6Y          110.3
g2486        116
ve025        116.5
um596A       117
pFS6.5-3     119.2
ve031        122
g3713        124.8
DHS1         124.8
mi369        124.8
        
99 markers      


Chromosome 5

Markers Distance (cM)
BHB2           0
O5629          3
g3715          6.2
um515D         6.2
ctr1           9.1
GLU1          10.9
mi121         11
nga225        11
nga158        13.7
ASA1          16.4
O6569         16.4
m217          16.9
g3837         17.9
mi97          19.4
KG31          20.9
nga249        22.3
ve033         24.2
ca72          29
mi174         29.5
CHS           29.5
nga151        29.5
RO1           33.7
nga106        33.7
mi322         33.7
mi438         33.7
C1'           34.6
ve026         36
g4560         36.9
TSL           37.7
mi138         39.6
mi90          43
mi433         43.5
Gsl-but-Ar    43.5
CR12          44.2
m291          45.1
g4556         51.9
g4715b        56
g6843         59.5
mi219         59.5
nga139        61
AF3           63.6
Tn139         64.9
CATTS0262     69.7
mi125         69.7
um579D        74.1
nga76         75.8
mi291b        76.4
Ms1           78
phyC          78.5
mi137         79
GRF3          79.9
PR5K          88
CATTS0191     89.1
mi323         89.6
m247          90.6
CR3           95.1
g4028         98.3
DFR          101.8
spl2         102.9
C42          104.8
mi194        105.8
agp6         106.3
mi83         106.8
mi423b       110
mi61         110.6
ve027        113.7
mi271        117.1
mi2          117.6
nga129       118.9
m435         122.8
agp50        128
mi69         129.6
mi418        130.7
mi184        130.7
mi74a        130.7
mi70         130.7
m558A        132
LFY3         133.5
m211A        135.4
SEP5A        136.5
GSA1         140.6
ve032        141.8
g2368        143.9
ve028        144.9
pHJ5         146.9
m555         152.1
mi335        154.2
CATHHANKA    155.3
BIO205       157.9
CD3-42       160.5
        
90 markers      




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