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New Arabidopsis New 19-Apr-1997

AtDB Project atdb-curator at genome.Stanford.EDU
Sun Apr 20 13:27:20 EST 1997


=========== New Sequences =============

AB002560    AB002560     2217bp    DNA      PLN      07-APR-1997
    Arabidopsis thaliana DNA for CUC2, complete cds.
    CUC2.

ATABI2DNA   Y08966     1730bp    DNA      PLN      18-APR-1997
    A.thaliana gene encoding ABI2 protein.
    ABA response; ABI2 gene; protein phosphatase 2C; abi2; ABI2 protein
     phosphatase 2C.

ATABI2RNA   Y08965     1470bp    RNA      PLN      18-APR-1997
    A.thaliana mRNA for ABI2 protein.
    ABA response; ABI2 gene; protein phosphatase 2C; abi2; ABI2 protein
     phosphatase 2C.

ATAC001229  AC001229   109547bp    DNA      HTG      17-APR-1997
    *** SEQUENCING IN PROGRESS *** F5I14; HTGS phase 2, 1 ordered pieces.
    HTG; HTGS_PHASE2.

ATTRANFAC   Y10013     1260bp    RNA      PLN      09-APR-1997
    A.thaliana mRNA for putative transcription factor.
    transcription factor; putative transcription factor.

ATU77347    U77347     1977bp    mRNA     PLN      15-APR-1997
    Arabidopsis thaliana lethal leaf-spot 1 homolog (Lls1) mRNA, partial cds.
    Lls1; lethal leaf-spot 1 homolog.

ATU93845    U93845     3367bp    mRNA     PLN      17-APR-1997
    Arabidopsis thaliana ER-type calcium pump (ACA3) mRNA, complete cds.
    ACA3; ER-type calcium pump.

ATU95034    U95034      786bp    mRNA     PLN      13-APR-1997
    Arabidopsis thaliana germin-like protein (GLP3) mRNA, complete cds.
    GLP3; germin-like protein.

ATU95035    U95035      907bp    mRNA     PLN      13-APR-1997
    Arabidopsis thaliana germin-like protein (GLP3) mRNA, complete cds.
    GLP3; germin-like protein.

ATU95036    U95036      715bp    mRNA     PLN      13-APR-1997
    Arabidopsis thaliana germin-like protein (GLP10) mRNA, complete cds.
    GLP10; germin-like protein.

D85029      D85029     1245bp    mRNA     PLN      11-APR-1997
    Arabidopsis thaliana mRNA for geranylgeranyl pyrophosphate synthase,
     partial cds.
    geranylgeranyl pyrophosphate synthase.

D88901      D88901     1296bp    DNA      PLN      11-APR-1997
    Arabidopsis thaliana DNA for ribulosebisphosphate carboxylase, partial
     cds.
    rbcL; ribulosebisphosphate carboxylase.

D88902      D88902     1296bp    DNA      PLN      11-APR-1997
    Arabidopsis himalaica DNA for ribulosebisphosphate carboxylase, partial
     cds.
    rbcL; ribulosebisphosphate carboxylase.

D89620      D89620     4920bp    DNA      PLN      15-APR-1997
    Arabidopsis thaliana DNA for glutathione reductase, complete cds.
    glutathione reductase; glutathione reductase precursor.

=========== Updated Sequences =============

ATAC001229  AC001229   109547bp    DNA      HTG      17-APR-1997
    *** SEQUENCING IN PROGRESS *** F5I14; HTGS phase 2, 1 ordered pieces.
    HTG; HTGS_PHASE2.

ATHPPOX     D83139     1614bp    mRNA     PLN      10-MAR-1997
    Arabidopsis thaliana mRNA for protoporphyrinogen oxidase, complete cds.
    protoporphyrinogen oxidase; PPOX.

ATSHAGGY    Y07822     2021bp    RNA      PLN      17-APR-1997
    A.thaliana mRNA for Shaggy-like kinase tetha.
    serine/threonine protein kinase; Shaggy-like kinase tetha.

=========== Updated Features/Annotations  =============

ATAC000104  AC000104   107526bp    DNA      PLN      16-APR-1997
    F19P19, complete sequence.
    HTG; F19P19.1; F19P19.2; F19P19.3; F19P19.4; F19P19.5; F19P19.6;
     F19P19.7; F19P19.8; F19P19.9; F19P19.10; F19P19.11; F19P19.12;
     F19P19.13; F19P19.14; F19P19.15; F19P19.16; F19P19.17; F19P19.18;
     F19P19.19; F19P19.20; tRNA-Gly; F19P19.21; F19P19.22; F19P19.23;
     F19P19.24; F19P19.25; F19P19.26; F19P19.27; F19P19.28; F19P19.29.

ATAC000106  AC000106   110511bp    DNA      PLN      16-APR-1997
    F7G19, complete sequence.
    HTG; F7G19.1; tRNA-Glu; F7G19.2; F7G19.3; F7G19.4; F7G19.5; F7G19.6;
     F7G19.7; F7G19.8; F7G19.9; F7G19.10; F7G19.11; F7G19.12; F7G19.13;
     F7G19.14; F7G19.15; F7G19.16; F7G19.17; tRNA-Pro; F7G19.18; F7G19.19;
     F7G19.20; F7G19.21; F7G19.22; F7G19.23; F7G19.24; F7G19.25; tRNA-Ala;
     F7G19.26; F7G19.27; F7G19.28; F7G19.29.

ATADHIII    X82647     1390bp    RNA      PLN      18-APR-1997
    A.thaliana mRNA for Class III ADH.
    glutathione-dependent; ADH2 gene; alcohol dehydrogenase 3; adh2; class
     III ADH, glutathione-dependent; formaldehyde dehydrogenase..

ATALLOXSN   X92510     1791bp    RNA      PLN      09-APR-1997
    A.thaliana mRNA for allene oxide synthase.
    octadecanoid; allene oxide synthase; CYP74; cytochrome P450.

ATDAD1      X95585      570bp    RNA      PLN      08-APR-1997
    A.thaliana mRNA for DAD-1-like protein.
    DAD-1; DAD-1 homologue.

ATGLYII     Y08357      894bp    RNA      PLN      15-APR-1997
    A.thaliana mRNA for glyoxalase II.
    glyoxalase II; hydroxyacylglutathione hydrolase.

ATHA10A     D84240     2413bp    DNA      PLN      11-APR-1997
    Arabidopsis thaliana isolate Al-0 Adh gene for alcohol dehydrogenase,
     complete cds.
    Adh; alcohol dehydrogenase.

ATHATPLC1   D38544     1961bp    mRNA     PLN      08-APR-1997
    Arabidopsis thaliana mRNA for phosphoinositide specific phospholipase C,
     complete cds.
    phosphoinositide-specific phospholipase C; AtPLC1; phosphoinositide
     specific phospholipase C.

ATHB11B     D84241     2411bp    DNA      PLN      11-APR-1997
    Arabidopsis thaliana isolate Bl-1 Adh gene for alcohol dehydrogenase,
     complete cds.
    Adh; alcohol dehydrogenase.

ATHBIPA     D84414 D82817     2220bp    mRNA     PLN      16-APR-1997
    Arabidopsis thaliana mRNA for luminal binding protein (BiP), complete
     cds.
    luminal binding protein (BiP).

ATHBLA10C   D84242     2392bp    DNA      PLN      14-APR-1997
    Arabidopsis thaliana isolate Bla-10 Adh gene for alcohol dehydrogenase,
     complete cds.
    alcohol dehydrogenase; Adh.

ATHBS0D     D84243     2413bp    DNA      PLN      14-APR-1997
    Arabidopsis thaliana isolate Bs-0 Adh gene for alcohol dehydrogenase,
     complete cds.
    alcohol dehydrogenase; Adh.

ATHCER1LB   D64156      602bp    DNA      PLN      03-APR-1997
    Arabidopsis thaliana CER1-like gene, 3' fragment (partial cds).
    CER1-like gene.

ATHCHI0E    D84244     2412bp    DNA      PLN      14-APR-1997
    Arabidopsis thaliana isolate Chi-0 Adh gene for alcohol dehydrogenase,
     complete cds.
    alcohol dehydrogenase; Adh.

ATHCI0F     D84245     2389bp    DNA      PLN      14-APR-1997
    Arabidopsis thaliana isolate Ci-0 Adh gene for alcohol dehydrogenase,
     complete cds.
    alcohol dehydrogenase; Adh.

ATHES0G     D84246     2412bp    DNA      PLN      14-APR-1997
    Arabidopsis thaliana isolate Es-0 Adh gene for alcohol dehydrogenase,
     complete cds.
    alcohol dehydrogenase; Adh.

ATHGR1H     D84247     2411bp    DNA      PLN      14-APR-1997
    Arabidopsis thaliana isolate Gr-1 Adh gene for alcohol dehydrogenase,
     complete cds.
    alcohol dehydrogenase; Adh.

ATHITA0I    D84248     2395bp    DNA      PLN      14-APR-1997
    Arabidopsis thaliana isolate Ita-0 Adh gene for alcohol dehydrogenase,
     complete cds.
    alcohol dehydrogenase; Adh.

ATHYO0J     D84249     2413bp    DNA      PLN      14-APR-1997
    Arabidopsis thaliana isolate Yo-0 Adh gene for alcohol dehydrogenase,
     complete cds.
    alcohol dehydrogenase; Adh.

ATPER103    X98189     1257bp    RNA      PLN      11-APR-1997
    A.thaliana mRNA for peroxidase ATP1a, clone EST 103m21t7.
    peroxidase; peroxidase ATP1a.

ATPER163    X98190     1168bp    RNA      PLN      11-APR-1997
    A.thaliana mRNA for peroxidase ATP2a, clone EST 163i22t7.
    peroxidase; peroxidase ATP2a.

ATRAB11     Y08904     1153bp    RNA      PLN      17-APR-1997
    A.thaliana mRNA for Rab11 protein.
    GTP-binding protein; rab11 gene; Rab11 protein; rab11.

ATU27811    U27811     3322bp    DNA      PLN      17-APR-1997
    Arabidopsis thaliana actin7 (ACT7) gene, complete cds.
    ACT7; actin7.

ATU86081    U86081     5740bp    DNA      PLN      16-APR-1997
    Arabidopsis thaliana root hair defective 3 (RHD3) gene, complete cds.
    RHD3; root hair defective 3.

D79218      D79218      758bp    mRNA     PLN      09-APR-1997
    Arabidopsis thaliana AtCR20-1 mRNA.
    AtCR20-1.

D83531      D83531     1590bp    mRNA     PLN      10-APR-1997
    Arabidopsis thaliana mRNA for GDP dissociation inhibitor, complete cds.
    GDP dissociation inhibitor.


To obtain any Arabidopsis DNA sequence use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web servers for sequences:
  BLAST & FASTA:  http://genome-www.stanford.edu/Arabidopsis/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://www.nig.ac.jp/






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