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New Arabidopsis DNA 09-Aug-1997

AtDB Project arabidopsis-seq at genome.Stanford.EDU
Sat Aug 9 16:30:43 EST 1997


====================== New DNA Sequences =======================

A37879      A37879     1685bp    DNA      PAT      05-MAR-1997
    Sequence 1 from Patent WO9401559.

A37880      A37880     1740bp    DNA      PAT      05-MAR-1997
    Sequence 2 from Patent WO9401559.

A38326      A38326       28bp    DNA      PAT      05-MAR-1997
    Sequence 1 from Patent WO9409143.

A38327      A38327       32bp    DNA      PAT      05-MAR-1997
    Sequence 2 from Patent WO9409143.

A41292      A41292     2126bp    DNA      PAT      05-MAR-1997
    Sequence 1 from Patent WO9425593.

A41577      A41577     1259bp    DNA      PAT      05-MAR-1997
    Sequence 3 from Patent WO9428141.

A41579      A41579     1490bp    DNA      PAT      05-MAR-1997
    Sequence 5 from Patent WO9428141.

A41586      A41586      174bp    DNA      PAT      05-MAR-1997
    Sequence 12 from Patent WO9428141.

A44314      A44314     1748bp    DNA      PAT      07-MAR-1997
    Sequence 1 from Patent WO9511978.
    AMMONIUMCARRIER.

A45742      A45742     1921bp    DNA      PAT      07-MAR-1997
    Sequence 21 from Patent WO9520668.

A45779      A45779     6760bp    DNA      PAT      07-MAR-1997
    Sequence 17 from Patent WO9520046.

A45785      A45785     3209bp    DNA      PAT      07-MAR-1997
    Sequence 23 from Patent WO9520046.

A45796      A45796       87bp    DNA      PAT      07-MAR-1997
    Sequence 34 from Patent WO9520046.

A47138      A47138      565bp    DNA      PAT      07-MAR-1997
    Sequence 13 from Patent WO9529246.

A47140      A47140      355bp    DNA      PAT      07-MAR-1997
    Sequence 15 from Patent WO9529246.

A47149      A47149      692bp    DNA      PAT      07-MAR-1997
    Sequence 24 from Patent WO9529246.

A47150      A47150      395bp    DNA      PAT      07-MAR-1997
    Sequence 25 from Patent WO9529246.

A47151      A47151      872bp    DNA      PAT      07-MAR-1997
    Sequence 26 from Patent WO9529246.

A47152      A47152     1641bp    DNA      PAT      07-MAR-1997
    Sequence 27 from Patent WO9529246.

A47153      A47153      725bp    DNA      PAT      07-MAR-1997
    Sequence 28 from Patent WO9529246.

A47154      A47154      830bp    DNA      PAT      07-MAR-1997
    Sequence 29 from Patent WO9529246.

A47155      A47155      764bp    DNA      PAT      07-MAR-1997
    Sequence 30 from Patent WO9529246.

A50828      A50828     1124bp    DNA      PAT      07-MAR-1997
    Sequence 1 from Patent WO9614414.

A50831      A50831     4201bp    DNA      PAT      07-MAR-1997
    Sequence 4 from Patent WO9614414.

A50848      A50848       25bp    DNA      PAT      07-MAR-1997
    Sequence 21 from Patent WO9614414.

A50849      A50849       20bp    DNA      PAT      07-MAR-1997
    Sequence 22 from Patent WO9614414.

A50851      A50851       22bp    DNA      PAT      07-MAR-1997
    Sequence 24 from Patent WO9614414.

A50852      A50852       21bp    DNA      PAT      07-MAR-1997
    Sequence 25 from Patent WO9614414.

A50853      A50853       20bp    DNA      PAT      07-MAR-1997
    Sequence 26 from Patent WO9614414.

A50854      A50854       19bp    DNA      PAT      07-MAR-1997
    Sequence 27 from Patent WO9614414.

A50855      A50855       19bp    DNA      PAT      07-MAR-1997
    Sequence 28 from Patent WO9614414.

AF003728    AF003728     1030bp    mRNA     PLN      06-AUG-1997
    Arabidopsis thaliana plasma membrane intrinsic protein (SIMIP) mRNA,
     complete cds.
    SIMIP; plasma membrane intrinsic protein.

AF009954    AF009954     3200bp    DNA      PLN      05-AUG-1997
    Arabidopsis thaliana phytoene synthase (PSY) gene, complete cds.
    PSY; phytoene synthase.

ATU82434    U82434      671bp    mRNA     PLN      02-AUG-1997
    Arabidopsis thaliana GTPase AtRAB8 (atrab8) mRNA, complete cds.
    atrab8; AtRAB8.

ATU94746    U94746     1279bp    mRNA     PLN      02-AUG-1997
    Arabidopsis thaliana WD repeat protein ATAN11 mRNA, complete cds.
    ATAN11.

ATY14316    Y14316     1479bp    RNA      PLN      04-AUG-1997
    Arabidopsis thaliana mRNA for MAP3K gamma protein kinase.
    MAP3K gamma protein kinase.

LEGALK      X99851     1929bp    RNA      PLN      01-AUG-1997
    L.erecta mRNA for galactokinase.
    galactokinase; galK gene; galk.

==================== Updated DNA Sequences =====================

AC002311    AC002311    85684bp    DNA      HTG      01-AUG-1997
    *** SEQUENCING IN PROGRESS *** Genomic sequence of Arabidopsis BAC
     T26J12; HTGS phase 1, 2 unordered pieces.
    HTG; HTGS_PHASE1.

AC002342    AC002342    90932bp    DNA      HTG      06-AUG-1997
    *** SEQUENCING IN PROGRESS *** Arabidopsis thaliana 'TAMU' BAC 'T19K24'
     genomic sequence near marker 'unknown'; HTGS phase 1, 6 unordered
     pieces.
    HTG; HTGS_PHASE1.

=========== Updated Sequence Features/Annotations  =============

AB003041    AB003041     1529bp    mRNA     PLN      04-AUG-1997
    Arabidopsis thaliana mRNA for O-acetylserine (thiol) lyase, complete cds.
    cs26; O-acetylserine (thiol) lyase; cysteine synthase.

AB003522    AB003522     1192bp    DNA      PLN      06-AUG-1997
    Arabidopsis thaliana DNA for larger subunit of Rubisco, beta subunit of
     coupling factor one, partial cds.
    larger subunit of; beta subunit of coupling factor one; atpB; rbcL;
     larger subunit of Rubisco.

ATAF002109  AF002109   108847bp    DNA      PLN      04-AUG-1997
    Arabidopsis thaliana chromosome II BAC T28M21 genomic sequence.
    HTG; T28M21.1; 5' partial cucumisin serine protease isolog; T28M21.2;
     tRNA-Asp; T28M21.3; T28M21.4; T28M21.5; T28M21.6; T28M21.7; T28M21.8;
     T28M21.9; T28M21.10; T28M21.11; T28M21.12; T28M21.13; T28M21.14;
     T28M21.15; T28M21.16; T28M21.17; T28M21.18; T28M21.19; T28M21.20;
     T28M21.21; T28M21.22; T28M21.23; T28M21.24; T28M21.25.

ATBFRUCT    X89454     1960bp    RNA      PLN      05-AUG-1997
    A.thaliana mRNA for Beta-fructosidase.
    beta-fructofuranosidase; beta-fructosidase; Beta-fruct.

ATHB4       Y09582     2040bp    DNA      PLN      02-AUG-1997
    A.thaliana ATHB-4 gene.
    ATHB-4 gene; HD-zip protein; ATHB-4; HD-Zip protein.

ATU72241    U72241     3453bp    DNA      PLN      07-AUG-1997
    Arabidopsis thaliana histone H1-3 (His1-3) gene, complete cds.
    His1-3; histone H1-3.

ATU73781    U73781      754bp    mRNA     PLN      07-AUG-1997
    Arabidopsis thaliana histone H1-3 (His1-3) mRNA, complete cds.
    His1-3; histone H1-3.

ATU95973    U95973   115641bp    DNA      PLN      04-AUG-1997
    Arabidopsis thaliana BAC T19D16 genomic sequence.
    HTG; T19D16.1; receptor-associated kinase isolog; T19D16.22; T19D16.23;
     T19D16.2; transcription factor RUSH-1alpha isolog; T19D16.3;
     lysophospholipase isolog; T19D16.4; Serine carboxypeptidase isolog;
     T19D16.24; T19D16.5; T19D16.6; Ser/Thr protein kinase isolog; T19D16.7;
     DnaJ isolog; T19D16.8; tRNA-Arg; T19D16.25; T19D16.9; tRNA-Met;
     T19D16.26; Barley Mlo protein isolog; T19D16.27; T19D16.10; membrane
     protein PTM1 precursor isolog; T19D16.11; Fe(II) transporter isolog;
     T19D16.12; ferredoxin precusor isolog; T19D16.13; endomembrane protein
     EMP70 precusor isolog; T19D16.14; Ser/Thr kinase; T19D16.15; DNA
     helicase isolog; T19D16.16; disease resistance protein RPM1 isolog;
     T19D16.17; membrane-associated salt-inducible protein isolog; T19D16.18;
     phosphatidylinositol-4-phosphate 5-kinase isolog; T19D16.19; T19D16.28;
     T19D16.20; BRCA1-associated RING domain protein isolog; T19D16.21;
     receptor-kinase isolog.

D89341      D89341     4484bp    DNA      PLN      01-AUG-1997
    Arabidopsis thaliana DNA for luminal binding protein, complete cds.
    BiP; luminal binding protein.

D89342      D89342     4631bp    DNA      PLN      01-AUG-1997
    Arabidopsis thaliana DNA for luminal binding protein, complete cds.
    BiP; luminal binding protein.


To obtain any Arabidopsis DNA sequence use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web servers for sequences:
  BLAST & FASTA:  http://genome-www.stanford.edu/Arabidopsis/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://www.nig.ac.jp/






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