New Arabidopsis DNA 25-Jan-1997

AtDB Project atdb-curator at genome.Stanford.EDU
Sat Jan 25 13:15:47 EST 1997


ATAC000106  AC000106   110542bp    DNA      HTG      20-JAN-1997
    *** SEQUENCING IN PROGRESS *** F7G19; HTGS phase 2, 1 ordered pieces.
    HTG; HTGS_PHASE2.

ATAC000107  AC000107    95108bp    DNA      HTG      22-JAN-1997
    *** SEQUENCING IN PROGRESS *** Genomic sequence for Arabidopsis thaliana
     BAC F17F8; HTGS phase 1, 7 unordered pieces.
    HTG; HTGS_PHASE1.

ATU76670    U76670     8017bp    DNA      PLN      23-JAN-1997
    Arabidopsis thaliana recA-like protein (AtDMC1) gene, complete cds.
    AtDMC1; RecA-like protein; meiosis.

ATU76697    U76697     1874bp    DNA      PLN      23-JAN-1997
    Arabidopsis thaliana transposon-like element Limpet1, genomic sequence.

ATU83500    U83500     1811bp    mRNA     PLN      23-JAN-1997
    Arabidopsis thaliana cystathionine gamma-synthase (CGS) mRNA, complete
     cds.
    CGS; cystathionine gamma-synthase.

ATU83501    U83501     3135bp    DNA      PLN      23-JAN-1997
    Arabidopsis thaliana permease homolog (AtPER-X) gene, partial cds.
    AtPER-X; permease homolog.

ATZ84201    Z84201     1348bp    DNA      SYN      17-JAN-1997
    Artificial sequence; A.thaliana DNA; pGV1048 T-DNA; GUS fusion protein
     (1348 bp).
    beta-glucuronidase; fusion protein; Gus gene; t-dna.

ATZ84202    Z84202     5438bp    DNA      PLN      17-JAN-1997
    A.thaliana ORFb, ORFc and AtPK2324 gene.
    serine/threonine protein kinase; ORFb; AtPK2324; ORFc.

ATZ84203    Z84203     1574bp    DNA      PLN      17-JAN-1997
    Artificial sequence; A.thaliana DNA; pGV1048 T-DNA; GUS fusion protein
     (1574 bp).
    beta-glucuronidase; fusion protein; Gus gene; t-dna.

MIATGENA    Y08501   200000bp    DNA      circular PLN
    A.thaliana mitochondrial genome, part A.
    18S ribosomal RNA; 26S ribosomal RNA; 5S ribosomal RNA; apocytochrome B;
     atp1 gene; atp6 gene; atp9 gene; ATPase subunit 1; ATPase subunit 6;
     ATPase subunit 9; ccb203 gene; ccb206 gene; ccb256 gene; ccb382 gene;
     ccb452 gene; cob gene; cox1 gene; cox2 gene; cox3 gene; cytochrome c
     biogenesis orf203; cytochrome c biogenesis orf206; cytochrome c
     biogenesis orf256; cytochrome c biogenesis orf382; cytochrome c
     biogenesis orf452; cytochrome c oxidase subunit 1; cytochrome c oxidase
     subunit 2; cytochrome c oxidase subunit 3; matR gene; maturase; nad1
     gene; nad2 gene; nad3 gene; nad4 gene; nad4L gene; nad5 gene; nad6 gene;
     nad7 gene; nad9 gene; NADH dehydrogenase subunit 1; NADH dehydrogenase
     subunit 2; NADH dehydrogenase subunit 3; NADH dehydrogenase subunit 4;
     NADH dehydrogenase subunit 4L; NADH dehydrogenase subunit 5; NADH
     dehydrogenase subunit 6; NADH dehydrogenase subunit 7; NADH
     dehydrogenase subunit 9; ORF25; orf25 gene; orfB; orfB gene; orfX gene;
     ribosomal protein L16; ribosomal protein L2; ribosomal protein L5;
     ribosomal protein S12; ribosomal protein S3; ribosomal protein S4;
     ribosomal protein S7; rpl16 gene; rpl2 gene; rpl5 gene; rps12 gene; rps3
     gene; rps4 gene; rps7 gene; rrn18 gene; rrn28 gene; rrn5 gene; transfer
     RNA-Asn; transfer RNA-Asp; transfer RNA-Cys; transfer RNA-fMet; transfer
     RNA-Gln; transfer RNA-Glu; transfer RNA-Gly; transfer RNA-His; transfer
     RNA-Ile; transfer RNA-Lys; transfer RNA-Met; transfer RNA-Pro; transfer
     RNA-Ser; transfer RNA-Trp; transfer RNA-Tyr; trnC gene; trnD gene; trnE
     gene; trnfM gene; trnG gene; trnH gene; trnI gene; trnK gene; trnM gene;
     trnN gene; trnP gene; trnQ gene; trnS gene; trnW gene; trnY gene; rrn26;
     26S ribosomal protein; nad5; nad9; rpl16; rps3; tRNA-Lys; ccb206; cox2;
     ccb452; tRNA-Gly; rpl5; cob; apocytochrome B; tRNA-Ser; tRNA-fMet; nad6;
     nad2; rps4; tRNA-Tyr; tRNA-Pro; tRNA-Cys; tRNA-Asn; atp6-1; tRNA-Ile;
     nad7; nad1; matR; rpl2; orfX; nad4; orf25; nad4L.

MIATGENB    Y08502   166924bp    DNA      circular PLN
    A.thaliana mitochondrial genome, part B.
    18S ribosomal RNA; 26S ribosomal RNA; 5S ribosomal RNA; apocytochrome B;
     atp1 gene; atp6 gene; atp9 gene; ATPase subunit 1; ATPase subunit 6;
     ATPase subunit 9; ccb203 gene; ccb206 gene; ccb256 gene; ccb382 gene;
     ccb452 gene; cob gene; cox1 gene; cox2 gene; cox3 gene; cytochrome c
     biogenesis orf203; cytochrome c biogenesis orf206; cytochrome c
     biogenesis orf256; cytochrome c biogenesis orf382; cytochrome c
     biogenesis orf452; cytochrome c oxidase subunit 1; cytochrome c oxidase
     subunit 2; cytochrome c oxidase subunit 3; matR gene; maturase; nad1
     gene; nad2 gene; nad3 gene; nad4 gene; nad4L gene; nad5 gene; nad6 gene;
     nad7 gene; nad9 gene; NADH dehydrogenase subunit 1; NADH dehydrogenase
     subunit 2; NADH dehydrogenase subunit 3; NADH dehydrogenase subunit 4;
     NADH dehydrogenase subunit 4L; NADH dehydrogenase subunit 5; NADH
     dehydrogenase subunit 6; NADH dehydrogenase subunit 7; NADH
     dehydrogenase subunit 9; ORF25; orf25 gene; orfB; orfB gene; orfX gene;
     ribosomal protein L16; ribosomal protein L2; ribosomal protein L5;
     ribosomal protein S12; ribosomal protein S3; ribosomal protein S4;
     ribosomal protein S7; rpl16 gene; rpl2 gene; rpl5 gene; rps12 gene; rps3
     gene; rps4 gene; rps7 gene; rrn18 gene; rrn28 gene; rrn5 gene; transfer
     RNA-Asn; transfer RNA-Asp; transfer RNA-Cys; transfer RNA-fMet; transfer
     RNA-Gln; transfer RNA-Glu; transfer RNA-Gly; transfer RNA-His; transfer
     RNA-Ile; transfer RNA-Lys; transfer RNA-Met; transfer RNA-Pro; transfer
     RNA-Ser; transfer RNA-Trp; transfer RNA-Tyr; trnC gene; trnD gene; trnE
     gene; trnfM gene; trnG gene; trnH gene; trnI gene; trnK gene; trnM gene;
     trnN gene; trnP gene; trnQ gene; trnS gene; trnW gene; trnY gene;
     tRNA-Lys; cox3; tRNA-Ser; tRNA-Tyr; tRNA-Glu; ccb382; ccb256; tRNA-Trp;
     tRNA-Gln; ccb203; rpsl2; nad3; tRNA-Asp; atp9; nad1; atp6-2; atp1; rps7;
     nad2; tRNA-met; cox1; rrn5; rrn18.

To obtain any Arabidopsis DNA sequence use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web servers for sequences:
  BLAST & FASTA:  http://genome-www.stanford.edu/Arabidopsis/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://www.nig.ac.jp/






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