New Arabidopsis DNA 18-Oct-1997

AtDB Project arabidopsis-seq at genome.Stanford.EDU
Sat Oct 18 21:59:31 EST 1997


====================== New DNA Sequences =======================

AF002706    AF002706     3125bp    mRNA     PLN      15-OCT-1997
    Arabidopsis thaliana MutS homolog 2 (MSH2) mRNA, complete cds.
    MSH2; MutS homolog 2.

AF003005    AF003005     5317bp    DNA      PLN      15-OCT-1997
    Arabidopsis thaliana MutS homolog 2 (atMSH2) gene, complete cds.
    atMSH2; MutS homolog 2.

AF009657    AF009657      258bp    mRNA     PLN      15-OCT-1997
    Arabidopsis thaliana MutS homolog 6-like protein mRNA, partial cds.
    MutS homolog 6-like protein.

AF019380    AF019380     2713bp    mRNA     PLN      13-OCT-1997
    Arabidopsis thaliana putative phosphatidylinositol-4-phosphate 5-kinase
     mRNA, complete cds.
    putative phosphatidylinositol-4-phosphate 5-kinase.

AF021937    AF021937     7709bp    DNA      PLN      13-OCT-1997
    Arabidopsis thaliana catalase 3 (CAT3) and catalase 1 (CAT1) genes,
     complete cds.
    CAT3; catalase 3; CAT1; catalase 1.

AF022658    AF022658      938bp    mRNA     PLN      12-OCT-1997
    Arabidopsis thaliana putative c2h2 zinc finger transcription factor mRNA,
     complete cds.
    putative c2h2 zinc finger transcription factor.

AF023167    AF023167     1365bp    mRNA     PLN      14-OCT-1997
    Arabidopsis thaliana adenosine-5'-phosphosulfate reductase (APSR) mRNA,
     complete cds.
    APSR; adenosine-5'-phosphosulfate reductase.

ATY13173    Y13173      860bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prct.
    20S proteasome; multicatalytic endopeptidase; prct.

ATY13174    Y13174      600bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prcfb.
    20S proteasome; multicatalytic endopeptidase; prcfb.

ATY13175    Y13175      829bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prcga.
    20S proteasome; multicatalytic endopeptidase; prcga.

ATY13176    Y13176     1006bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prc3.
    20S proteasome; multicatalytic endopeptidase; prc3.

ATY13177    Y13177      866bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prcfc.
    20S proteasome; multicatalytic endopeptidase; prcfc.

ATY13178    Y13178     1068bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prcfa.
    20S proteasome; multicatalytic endopeptidase; prcfa.

ATY13179    Y13179      717bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prc6b.
    20S proteasome; multicatalytic endopeptidase; prc6b.

ATY13180    Y13180      740bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prc6c.
    20S proteasome; multicatalytic endopeptidase; prc6c.

ATY13181    Y13181     1016bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prc9.
    20S proteasome; multicatalytic endopeptidase; prc9.

ATY13182    Y13182      954bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prc2b.
    20S proteasome; multicatalytic endopeptidase; prc2b.

ATY13691    Y13691      976bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prc1.
    alpha subunit; endopeptidase; prc1 gene; proteosome; prc1; multicatalytic
     endopeptidase complex, proteasome component, alpha subunit.

ATY13692    Y13692      753bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prgb.
    beta subunit; endopeptidase; prcgb gene; proteosome; prcgb;
     multicatalytic endopeptidase complex, proteasome component, beta
     subunit.

ATY13693    Y13693      958bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prc8.
    alpha subunit; endopeptidase; prc8 gene; proteosome; prc8; multicatalytic
     endopeptidase complex, proteasome component, alpha subunit.

ATY13694    Y13694      946bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prcd.
    beta subunit; endopeptidase; prcd gene; proteosome precursor; prcd;
     multicatalytic endopeptidase complex, proteasome precursor, beta
     subunit.

ATY13695    Y13695     1031bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prce.
    beta subunit; endopeptidase; prce gene; proteosome precursor; prce;
     multicatalytic endopeptidase complex, proteasome precursor, beta
     subunit.

ATY13696    Y13696      600bp    RNA      PLN      10-OCT-1997
    Arabidopsis thaliana mRNA for proteasome subunit prch.
    beta subunit; endopeptidase; prch gene; proteosome; prch; multicatalytic
     endopeptidase complex, proteasome component, beta subunit.

==================== Updated DNA Sequences =====================

AC002342    AC002342    82359bp    DNA      HTG      14-OCT-1997
    *** SEQUENCING IN PROGRESS *** Arabidopsis thaliana 'TAMU' BAC 'T19K24'
     genomic sequence near marker 'unknown'; HTGS phase 2, 1 ordered pieces.
    HTG; HTGS_PHASE2.

AC002387    AC002387   122928bp    DNA      HTG      17-OCT-1997
    *** SEQUENCING IN PROGRESS *** Arabidopsis thaliana 'IGF' BAC 'F4L23'
     genomic sequence near marker 'CIC02E07'; HTGS phase 2, 1 ordered pieces.
    HTG; HTGS_PHASE2.

AC002409    AC002409    72839bp    DNA      HTG      17-OCT-1997
    *** SEQUENCING IN PROGRESS *** Arabidopsis thaliana 'TAMU' BAC 'T20B5'
     genomic sequence near marker 'CIC11C08'; HTGS phase 2, 1 ordered pieces.
    HTG; HTGS_PHASE2.

AC002505    AC002505   125275bp    DNA      HTG      15-OCT-1997
    *** SEQUENCING IN PROGRESS *** Arabidopsis thaliana 'TAMU' BAC 'T9J22'
     genomic sequence near marker 'B68'; HTGS phase 1, 4 unordered pieces.
    HTG; HTGS_PHASE1.

AC002510    AC002510    99028bp    DNA      HTG      14-OCT-1997
    *** SEQUENCING IN PROGRESS *** Arabidopsis thaliana 'TAMU' BAC 'T32G6'
     genomic sequence near marker 'CIC11C08'; HTGS phase 1, 2 unordered
     pieces.
    HTG; HTGS_PHASE1.

AC002521    AC002521    89685bp    DNA      HTG      14-OCT-1997
    *** SEQUENCING IN PROGRESS *** Arabidopsis thaliana 'TAMU' BAC 'T20F6'
     genomic sequence near marker 'CIC11A04'; HTGS phase 1, 3 unordered
     pieces.
    HTG; HTGS_PHASE1.

AC002560    AC002560   101041bp    DNA      HTG      16-OCT-1997
    *** SEQUENCING IN PROGRESS *** Genomic sequence for Arabidopsis thaliana
     BAC F21B7; HTGS phase 2, 1 ordered pieces.
    HTG; HTGS_PHASE2.

AC003000    AC003000   115050bp    DNA      HTG      15-OCT-1997
    *** SEQUENCING IN PROGRESS *** Arabidopsis thaliana 'TAMU' BAC 'T5I7'
     genomic sequence near marker 'CIC10A06'; HTGS phase 1, 2 unordered
     pieces.
    HTG; HTGS_PHASE1.

=========== Updated Sequence Features/Annotations  =============

ATKASIIIG   Y11689     2640bp    DNA      PLN      13-OCT-1997
    A.thaliana KAS III gene.
    3-ketoacyl-acyl carrier protein synthase III; KAS III gene; KAS III.


To obtain any Arabidopsis DNA sequence use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web servers for sequences:
  BLAST & FASTA:  http://genome-www.stanford.edu/Arabidopsis/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://www.nig.ac.jp/






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