New Arabidopsis DNA 06-Sep-1997

AtDB Project arabidopsis-seq at genome.Stanford.EDU
Sat Sep 6 11:42:19 EST 1997


====================== New DNA Sequences =======================

AB006696    AB006696    78379bp    DNA      PLN      22-AUG-1997
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MAF19.

AB006697    AB006697    80970bp    DNA      PLN      22-AUG-1997
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MAH20.

AB006698    AB006698    84510bp    DNA      PLN      22-AUG-1997
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MCL19.

AB006699    AB006699    77363bp    DNA      PLN      22-AUG-1997
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MDJ22.

AB006700    AB006700    83865bp    DNA      PLN      22-AUG-1997
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MHF15.

AB006701    AB006701    84194bp    DNA      PLN      22-AUG-1997
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MOP9.

AB006702    AB006702    86263bp    DNA      PLN      22-AUG-1997
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MPO12.

AB006703    AB006703    71522bp    DNA      PLN      22-AUG-1997
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MRH10.

AB006704    AB006704    79259bp    DNA      PLN      22-AUG-1997
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MSH12.

AB006705    AB006705    74877bp    DNA      PLN      22-AUG-1997
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MTH12.

AB006706    AB006706    81701bp    DNA      PLN      22-AUG-1997
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MVA3.

AB006707    AB006707    82315bp    DNA      PLN      22-AUG-1997
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MYC6.

AB006708    AB006708    78844bp    DNA      PLN      22-AUG-1997
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MYJ24.

AB006810    AB006810     1626bp    mRNA     PLN      02-SEP-1997
    Arabidopsis thaliana mRNA for ATMRK1, complete cds.
    ATMRK1.

AF005047    AF005047     3530bp    DNA      PLN      03-SEP-1997
    Arabidopsis thaliana transport inhibitor response 1 (TIR1) gene, complete
     cds.
    TIR1; transport inhibitor response 1.

AF005048    AF005048     2225bp    mRNA     PLN      03-SEP-1997
    Arabidopsis thaliana transport inhibitor response 1 (TIR1) mRNA, complete
     cds.
    TIR1; transport inhibitor response 1.

AF009228    AF009228      895bp    mRNA     PLN      03-SEP-1997
    Arabidopsis thaliana NaCl-inducible Ca2+-binding protein (ACP1) mRNA,
     complete cds.
    ACP1; NaCl-inducible Ca2+-binding protein.

AF015542    AF015542     1826bp    mRNA     PLN      03-SEP-1997
    Arabidopsis thaliana sigma factor 1 (SIG1) mRNA, nuclear gene encoding
     chloroplast protein, complete cds.
    SIG1; sigma factor 1.

AF015543    AF015543     2184bp    mRNA     PLN      03-SEP-1997
    Arabidopsis thaliana sigma factor 2 (SIG2) mRNA, nuclear gene encoding
     chloroplast protein, complete cds.
    SIG2; sigma factor 2.

AF015544    AF015544     1897bp    mRNA     PLN      03-SEP-1997
    Arabidopsis thaliana sigma factor 3 (SIG3) mRNA, nuclear gene encoding
     chloroplast protein, complete cds.
    SIG3; sigma factor 3.

ATU54560    U54560     1357bp    mRNA     PLN      03-SEP-1997
    Arabidopsis thaliana putative 26S proteasome subunit athMOV34 mRNA,
     complete cds.
    athMOV34.

ATU54561    U54561     1183bp    mRNA     PLN      03-SEP-1997
    Arabidopsis thaliana translation initiation factor eIF3 p47 subunit
     homolog mRNA, complete cds.

ATU96613    U96613     2700bp    mRNA     PLN      03-SEP-1997
    Arabidopsis thaliana serine/threonine kinase (SIK1) mRNA, complete cds.
    SIK1; serine/threonine kinase.

==================== Updated DNA Sequences =====================

ATU43147    U43147     4058bp    DNA      PLN      02-SEP-1997
    Arabidopsis thaliana catalase 3 (CAT3) gene, complete cds.
    CAT3; catalase 3.

=========== Updated Sequence Features/Annotations  =============

AB006032    AB006032     2036bp    mRNA     PLN      29-AUG-1997
    Arabidopsis thaliana mRNA for nitrite reductase, complete cds.
    nitrite reductase.

ATHPSAA1A   L36246     1046bp    mRNA     PLN      29-AUG-1997
    Arabidopsis thaliana anoxia-induced protein (psaA1) mRNA, partial cds.
    anoxia-induced protein; psaA1.

ATHTLPA     L78079      951bp    mRNA     PLN      02-SEP-1997
    Arabidopsis thaliana thaumatin-like protein mRNA, complete cds.
    thaumatin-like protein.

ATU78866    U78866     6612bp    DNA      PLN      29-AUG-1997
    Arabidopsis thaliana putative arginine-aspartate-rich RNA binding protein
     (gene1500), (gene1000), and (gene400) genes, complete cds.
    gene1500; putative arginine-aspartate-rich RNA binding protein; gene1000;
     gene400.

ATU78867    U78867     1411bp    mRNA     PLN      29-AUG-1997
    Arabidopsis thaliana putative aspartate-arginine-rich mRNA binding
     protein mRNA, complete cds.
    putative aspartate-arginine-rich mRNA binding protein.

ATU78868    U78868     1171bp    mRNA     PLN      29-AUG-1997
    Arabidopsis thaliana putative aspartate-arginine-rich mRNA binding
     protein mRNA, partial cds.
    putative aspartate-arginine-rich mRNA binding protein.

ATU78869    U78869     1450bp    mRNA     PLN      29-AUG-1997
    Arabidopsis thaliana putative aspartate-arginine-rich mRNA binding
     protein mRNA, partial cds.
    putative aspartate-arginine-rich mRNA binding protein.

ATU78870    U78870      991bp    mRNA     PLN      29-AUG-1997
    Arabidopsis thaliana 27 kDa unknown protein mRNA, complete cds.

ATU78871    U78871      418bp    mRNA     PLN      29-AUG-1997
    Arabidopsis thaliana 12 kDa unknown protein mRNA, complete cds.

ATU81042    U81042     1787bp    DNA      PLN      29-AUG-1997
    Arabidopsis thaliana translation initiation factor gene, complete cds.
    translation initiation factor.

ATU81238    U81238     1336bp    mRNA     PLN      02-SEP-1997
    Arabidopsis thaliana putative Cys3His zinc finger protein (ATCTH) mRNA,
     complete cds.
    ATCTH; putative Cys3His zinc finger protein ATCTH.

ATU88402    U88402     1139bp    mRNA     PLN      02-SEP-1997
    Arabidopsis thaliana Rac-like protein mRNA, complete cds.
    Rac-like protein.

ATU89267    U89267     1357bp    mRNA     PLN      02-SEP-1997
    Arabidopsis thaliana p-hydroxyphenylpyruvate dioxygenase (HPD) mRNA,
     complete cds.
    HPD; p-hydroxyphenylpyruvate dioxygenase.

ATU91966    U91966     2187bp    DNA      PLN      03-SEP-1997
    Arabidopsis thaliana ribulose-1,5-bisphosphate carboxylase/oxygenase
     large subunit (rbcL) gene, chloroplast gene encoding chloroplast
     protein, complete cds.
    rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit.


To obtain any Arabidopsis DNA sequence use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web servers for sequences:
  BLAST & FASTA:  http://genome-www.stanford.edu/Arabidopsis/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://www.nig.ac.jp/






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