New Arabidopsis DNA 13-Sep-1997 3/3
AtDB Project
arabidopsis-seq at genome.Stanford.EDU
Thu Sep 18 20:41:35 EST 1997
ATT3T7POL Y09006 9208bp DNA PLN 29-AUG-1997
Arabidopsis thaliana rpoMt gene.
DNA-dependent RNA polymerase; rpoMt gene; rpoMt; mitochondrial
single-subunit DNA-dependent RNA polymerase.
ATTBASCPX X98926 1457bp RNA PLN 04-SEP-1997
A.thaliana mRNA for thylakoid-bound ascorbate peroxidase.
ascorbate peroxidase; thylakoid-bound ascorbate peroxidase.
ATTBASPER X98927 749bp RNA PLN 04-SEP-1997
A.thaliana mRNA for thylakoid-bound ascorbate peroxidase (fragment).
ascorbate peroxidase; thylakoid-bound ascorbate peroxidase.
ATTBPAF Y13673 1980bp RNA PLN 12-JUN-1997
Arabidopsis thaliana mRNA for TATA binding protein-associated factor.
TATA binding protein-associated factor.
ATTHRC Z46263 1619bp RNA PLN 17-JUN-1997
A.thaliana ThrC mRNA for threonine synthase.
ThrC gene; threonine synthase; ThrC.
ATTYKYRNA X84318 935bp RNA PLN 31-JUL-1997
A.thaliana TYKY mRNA for NADH:ubiquinone oxidoreductase.
TYKY; complex I; NADH dehydrogenase; NADH ubiquinone oxidoreductase;
TYKY; NADH:ubiquinone oxidoreductase (complex I).
ATU27299 U27299 2020bp mRNA PLN 10-JUN-1997
Arabidopsis thaliana serine/threonine protein phosphatase type 2A
regulatory subunit A mRNA, complete cds.
serine/threonine protein phosphatase type 2A regulatory subunit A.
ATU40161 U40161 2080bp mRNA PLN 11-JUN-1997
Arabidopsis thaliana type 2A protein serine/threonine phosphatase 55 kDa
B regulatory subunit mRNA, complete cds.
type 2A protein serine/threonine phosphatase 55 kDa B regulatory subunit.
ATU62020 U62020 1923bp mRNA PLN 16-JUL-1997
Arabidopsis thaliana lysine-sensitive aspartate kinase mRNA, complete
cds.
lysine-sensitive aspartate kinase.
ATU65638 U65638 2283bp mRNA PLN 21-JUL-1997
Arabidopsis thaliana vacuolar type ATPase subunit A mRNA, complete cds.
vacuolar type ATPase subunit A.
ATU71400 U71400 1249bp mRNA PLN 12-JUL-1997
Arabidopsis thaliana S-adenosyl-methionine-sterol-C-methyltransferase
mRNA, complete cds.
S-adenosyl-methionine-sterol-C- methyltransferase.
ATU72155 U72155 3781bp DNA PLN 31-JUL-1997
Arabidopsis thaliana beta-glucosidase (psr3.2) gene, complete cds.
psr3.2; beta-glucosidase.
ATU72241 U72241 3453bp DNA PLN 07-AUG-1997
Arabidopsis thaliana histone H1-3 (His1-3) gene, complete cds.
His1-3; histone H1-3.
ATU73781 U73781 754bp mRNA PLN 07-AUG-1997
Arabidopsis thaliana histone H1-3 (His1-3) mRNA, complete cds.
His1-3; histone H1-3.
ATU74669 U74669 800bp mRNA PLN 02-JUL-1997
Arabidopsis thaliana ras-related small GTPase (AtRAB11c) mRNA, complete
cds.
AtRAB11c; ras-related small GTPase.
ATU75603 U75603 700bp mRNA PLN 02-JUL-1997
Arabidopsis thaliana AtRab18 (AtRAB18) mRNA, complete cds.
AtRAB18; AtRab18.
ATU77381 U77381 984bp mRNA PLN 01-AUG-1997
Arabidopsis thaliana WD-40 repeat protein (AtArcA) mRNA, complete cds.
AtArcA; WD-40 repeat protein.
ATU78721 U78721 114144bp DNA PLN 14-JUL-1997
Arabidopsis thaliana chromosome II BAC T01B08 genomic sequence, complete
sequence.
HTG; T01B08.26; T01B08.1; T01B08.27; T01B08.2; T01B08.3; T01B08.29;
T01B08.4; T01B08.5; T01B08.6; T01B08.7; T01B08.8; T01B08.28; T01B08.9;
T01B08.10; T01B08.11; T01B08.12; T01B08.13; T01B08.14; T01B08.15;
T01B08.30; T01B08.16; T01B08.31; T01B08.17; tRNA-Pro; T01B08.18;
T01B08.19; T01B08.20; T01B08.21; T01B08.22; T01B08.23; T01B08.24;
T01B08.25; T01B08.32.
ATU82434 U82434 671bp mRNA PLN 02-AUG-1997
Arabidopsis thaliana GTPase AtRAB8 (atrab8) mRNA, complete cds.
atrab8; AtRAB8.
ATU83245 U83245 2332bp mRNA PLN 08-JUL-1997
Arabidopsis thaliana auxin response factor 1 (ARF1) mRNA, complete cds.
ARF1; auxin response factor 1.
ATU83619 U83619 3702bp DNA PLN 10-SEP-1997
Arabidopsis thaliana putative pectate lyase (At59) gene, complete cds.
At59; putative pectate lyase.
ATU83620 U83620 543bp DNA PLN 10-SEP-1997
Arabidopsis thaliana putative pectate lyase (A1) gene, partial cds.
A1; putative pectate lyase.
ATU83621 U83621 770bp DNA PLN 10-SEP-1997
Arabidopsis thaliana putative pectate lyase (A10) gene, partial cds.
A10; putative pectate lyase.
ATU83622 U83622 851bp DNA PLN 10-SEP-1997
Arabidopsis thaliana putative pectate lyase (A11) gene, partial cds.
A11; putative pectate lyase.
ATU84973 U84973 1377bp mRNA PLN 26-JUL-1997
Arabidopsis thaliana GUT15 mRNA, complete cds.
GUT15.
ATU86663 U86663 1281bp DNA PLN 11-JUN-1997
Arabidopsis thaliana aVps41p (AVPS41) gene, partial cds.
AVPS41; aVps41p.
ATU89272 U89272 1724bp mRNA PLN 24-JUN-1997
Arabidopsis thaliana chloroplast membrane protein ALBINO3 (ALBINO3) mRNA,
nuclear gene encoding chloroplast protein, complete cds.
ALBINO3; chloroplast membrane protein ALBINO3.
ATU89296 U89296 2124bp mRNA PLN 08-JUL-1997
Arabidopsis thaliana auxin response transcription factor 3 (ARF3) mRNA,
complete cds.
auxin response transcription factor 3.
ATU89771 U89771 1698bp mRNA PLN 08-JUL-1997
Arabidopsis thaliana ARF1-binding protein mRNA, complete cds.
ARF1-binding protein.
ATU90439 U90439 95824bp DNA PLN 21-JUL-1997
Arabidopsis thaliana chromosome II BAC T06D20 genomic sequence, complete
sequence.
HTG; T06D20.25; T06D20.1; actin isolog; T06D20.2; T06D20.3; T06D20.4;
T06D20.5; T06D20.6; T06D20.7; T06D20.8; T06D20.9; tRNA-Ser; T06D20.10;
T06D20.11; T06D20.12; T06D20.13; T06D20.14; T06D20.15; T06D20.26;
T06D20.16; T06D20.17; T06D20.18; T06D20.19; T06D20.20; T06D20.21;
T06D20.22; T06D20.23; T06D20.24.
ATU92084 U92084 762bp mRNA PLN 02-JUL-1997
Arabidopsis thaliana clathrin assembly protein AP19 mRNA, complete cds.
clathrin assembly protein AP19.
ATU92085 U92085 3964bp DNA PLN 02-JUL-1997
Arabidopsis thaliana clathrin assembly protein AP19 homolog (AAP19-1)
gene, complete cds.
AAP19-1; clathrin assembly protein AP19 homolog.
ATU92086 U92086 2833bp DNA PLN 02-JUL-1997
Arabidopsis thaliana clathrin assembly protein AP19 homolog (AAP19-2)
gene, complete cds.
AAP19-2; clathrin assembly protein AP19 homolog.
ATU92650 U92650 4809bp mRNA PLN 09-AUG-1997
Arabidopsis thaliana MRP-like ABC transporter mRNA, complete cds.
MRP-like ABC transporter.
ATU93215 U93215 104861bp DNA PLN 15-JUL-1997
Arabidopsis thaliana chromosome II BAC T06B20 genomic sequence, complete
sequence.
T06B20.1; maize transposon MuDR mudrA protein isolog; T06B20.2; T06B20.3;
T06B20.4; T06B20.5; T06B20.6; T06B20.7; T06B20.8; T06B20.9; T06B20.10;
T06B20.11; T06B20.12; T06B20.13; T06B20.14; T06B20.15; T06B20.16;
T06B20.25; T06B20.17; T06B20.18; T06B20.19; tRNA-Gly; T06B20.20;
T06B20.26; T06B20.21; T06B20.22; T06B20.23; T06B20.24; T06B20.27.
ATU94746 U94746 1279bp mRNA PLN 02-AUG-1997
Arabidopsis thaliana WD repeat protein ATAN11 mRNA, complete cds.
ATAN11.
ATU95967 U95967 1037bp mRNA PLN 28-JUN-1997
Arabidopsis thaliana beta-expansin mRNA, partial cds.
beta-expansin.
ATU95973 U95973 115641bp DNA PLN 04-AUG-1997
Arabidopsis thaliana BAC T19D16 genomic sequence.
HTG; T19D16.1; receptor-associated kinase isolog; T19D16.22; T19D16.23;
T19D16.2; transcription factor RUSH-1alpha isolog; T19D16.3;
lysophospholipase isolog; T19D16.4; Serine carboxypeptidase isolog;
T19D16.24; T19D16.5; T19D16.6; Ser/Thr protein kinase isolog; T19D16.7;
DnaJ isolog; T19D16.8; tRNA-Arg; T19D16.25; T19D16.9; tRNA-Met;
T19D16.26; Barley Mlo protein isolog; T19D16.27; T19D16.10; membrane
protein PTM1 precursor isolog; T19D16.11; Fe(II) transporter isolog;
T19D16.12; ferredoxin precusor isolog; T19D16.13; endomembrane protein
EMP70 precusor isolog; T19D16.14; Ser/Thr kinase; T19D16.15; DNA
helicase isolog; T19D16.16; disease resistance protein RPM1 isolog;
T19D16.17; membrane-associated salt-inducible protein isolog; T19D16.18;
phosphatidylinositol-4-phosphate 5-kinase isolog; T19D16.19; T19D16.28;
T19D16.20; BRCA1-associated RING domain protein isolog; T19D16.21;
receptor-kinase isolog.
ATU97223 U97223 513bp DNA PLN 27-JUN-1997
Arabidopsis thaliana disease resistance protein homolog (pNd11) gene,
partial cds.
pNd11; disease resistance protein homolog.
ATU97224 U97224 513bp DNA PLN 27-JUN-1997
Arabidopsis thaliana disease resistance protein homolog (pNd14) gene,
partial cds.
pNd14; disease resistance protein homolog.
ATU97225 U97225 507bp DNA PLN 27-JUN-1997
Arabidopsis thaliana disease resistance protein homolog (pNd12) gene,
partial cds.
pNd12; disease resistance protein homolog.
ATU97226 U97226 513bp DNA PLN 27-JUN-1997
Arabidopsis thaliana disease resistance protein homolog (pNd13) gene,
partial cds.
pNd13; disease resistance protein homolog.
ATU97546 U97546 2667bp DNA PLN 06-SEP-1997
Arabidopsis thaliana putative proton/phosphate cotransporter (AtPT4)
gene, complete cds.
AtPT4; putative proton/phosphate cotransporter.
ATU97568 U97568 1405bp mRNA PLN 06-SEP-1997
Arabidopsis thaliana serine/threonine protein kinase mRNA, complete cds.
serine/threonine protein kinase.
ATUDGE Z54214 1356bp RNA PLN 03-SEP-1997
A.thaliana mRNA for uridine diphosphate glucose epimerase.
uridine diphosphate glucose epimerase.
ATY09942 Y09942 885bp RNA PLN 10-JUN-1997
A.thaliana EBP mRNA.
EBP gene; EBP.
ATY12555 Y12555 936bp RNA PLN 10-JUN-1997
A.thaliana mRNA for alanyl tRNA synthetase.
alanyl tRNA synthetase; AlaRS gene; AlaRS; alanyl t-RNA synthetase.
ATY13GENE X90383 1520bp DNA PLN 23-JUL-1997
A.thaliana DNA for Y13 gene.
myb-repeat; Y13 gene; Y13.
ATY14052 Y14052 957bp RNA PLN 26-JUN-1997
Arabidopsis thaliana mRNA for ribosomal protein S6.
ribosomal protein S6; RPS6 gene; RPS6.
ATY14199 Y14199 1521bp RNA PLN 10-JUL-1997
Arabidopsis thaliana mRNA for MAP3K delta-1 protein kinase, partial.
MAP3K delta-1 protein kinase.
ATY14316 Y14316 1479bp RNA PLN 04-AUG-1997
Arabidopsis thaliana mRNA for MAP3K gamma protein kinase.
MAP3K gamma protein kinase.
ATY14325 Y14325 1694bp RNA PLN 30-JUL-1997
Arabidopsis thaliana mRNA for mevalonate diphosphate decarboxylase.
mevalonate diphosphate decarboxylase; MVD1 gene; MVD1.
ATY19GENE X90384 2973bp DNA PLN 23-JUL-1997
A.thaliana DNA for Y19 gene.
myb-repeat; Y19 gene; Y19.
ATY49GENE X90385 2471bp DNA PLN 23-JUL-1997
A.thaliana DNA for Y49 gene.
myb-repeat; Y49 gene; Y49.
ATY53GENE X90386 1866bp DNA PLN 23-JUL-1997
A.thaliana DNA for Y53 gene.
myb-repeat; Y53 gene; Y53.
ATZ82989 Z82989 3037bp RNA PLN 17-JUN-1997
A.thaliana mRNA for FCA gamma.
FCA gene; FCA gamma.
ATZ82990 Z82990 2880bp RNA PLN 17-JUN-1997
A.thaliana mRNA for FCA delta.
FCA gene; FCA delta.
ATZ82991 Z82991 1315bp RNA PLN 17-JUN-1997
A.thaliana mRNA for FCA beta.
FCA gene; FCA; FCA beta.
ATZ82992 Z82992 9763bp DNA PLN 17-JUN-1997
A.thaliana FCA gene encoding FCA alpha, beta, gamma and delta.
FCA gene; FCA; FCA alpha and FCA beta; FCA delta; FCA gamma.
ATZ82993 Z82993 5113bp RNA PLN 17-JUN-1997
A.thaliana mRNA for FCA alpha 1 and alpha 2.
FCA gene; FCA; FCA alpha 1; FCA alpha 2.
ATZ86093 Z86093 1450bp RNA PLN 07-JUL-1997
A.thaliana mRNA for b-Zip DNA binding protein.
BZIP; DNA binding protein; b-Zip DNA binding protein.
ATZ86094 Z86094 1010bp RNA PLN 07-JUL-1997
A.thaliana mRNA for plastid protein.
plastid protein.
ATZ86095 Z86095 1018bp RNA PLN 07-JUL-1997
A.thaliana mRNA for peptidyl-prolyl cis-trans isomerase.
peptidyl-prolyl cis-trans isomerase.
CHATMTS Y13943 2110bp RNA PLN 19-JUL-1997
Arabidopsis thaliana mRNA for chloroplast methionyl-tRNA synthetase.
methionyl-tRNA synthetase; AtcpMetRS; MEtRS.
D84552 D84552 1260bp DNA PLN 16-JUL-1997
Arabidopsis thaliana chloroplast genes for trnC and rpoB, partial cds.
RNA polymerase beta subunit; rpoB; trnC.
D86591 D86591 1755bp mRNA PLN 29-JUL-1997
Arabidopsis thaliana mRNA for inorganic phosphate transporter, complete
cds.
PHT1; inorganic phosphate transporter.
D86608 D86608 5796bp DNA PLN 29-JUL-1997
Arabidopsis thaliana DNA for inorganic phosphate transporter, complete
cds.
PHT1; inorganic phosphate transporter.
D87130 D87130 1172bp DNA PLN 19-JUN-1997
Arabidopsis thaliana DNA for terminal flower1, complete cds.
terminal flower1.
D87519 D87519 1172bp DNA PLN 19-JUN-1997
Arabidopsis thaliana DNA for terminal flower1, complete cds.
terminal flower1.
D89341 D89341 4484bp DNA PLN 01-AUG-1997
Arabidopsis thaliana DNA for luminal binding protein, complete cds.
BiP; luminal binding protein.
D89342 D89342 4631bp DNA PLN 01-AUG-1997
Arabidopsis thaliana DNA for luminal binding protein, complete cds.
BiP; luminal binding protein.
D89631 D89631 2045bp mRNA PLN 29-JUL-1997
Arabidopsis thaliana mRNA for sulfate transporter, complete cds.
ATST1; sulfate transporter.
F19K23 AC000375 97451bp DNA PLN 09-JUN-1997
Sequence of BAC F19K23 from Arabidopsis thaliana chromosome 1, complete
sequence.
HTG; F19K23.1; F19K23.2; F19K23.3; F19K23.4; F19K23.5; F19K23.6;
F19K23.7; F19K23.8; F19K23.9; F19K23.10; F19K23.11; F19K23.12;
F19K23.13; F19K23.14; F19K23.15; F19K23.16; F19K23.17; F19K23.18;
F19K23.19; F19K23.20; F19K23.21; F19K23.22.
F20P5 AC002062 114505bp DNA PLN 12-JUN-1997
Sequence of BAC F20P5 from Arabidopsis thaliana chromosome 1, complete
sequence.
HTG; F20P5.1; F20P5.2; F20P5.3; F20P5.4; F20P5.5; F20P5.6; F20P5.7;
F20P5.8; F20P5.9; F20P5.10; F20P5.11; F20P5.12; F20P5.13; F20P5.14;
F20P5.15; F20P5.16; F20P5.17; F20P5.18; F20P5.19; F20P5.20; F20P5.21;
tRNA-Pro; F20P5.22; F20P5.23; F20P5.24; F20P5.25; F20P5.26; F20P5.27;
F20P5.28; F20P5.29; F20P5.30.
F21M12 AC000132 146505bp DNA PLN 09-JUN-1997
Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete
sequence.
HTG; F21M12.1; F21M12.2; F21M12.3; F21M12.4; F21M12.5; F21M12.6;
F21M12.7; F21M12.8; F21M12.9; F21M12.10; F21M12.11; F21M12.12;
F21M12.13; F21M12.14; F21M12.15; F21M12.16; F21M12.17; F21M12.18;
F21M12.19; F21M12.20; F21M12.21; F21M12.22; F21M12.23; F21M12.24;
F21M12.25; F21M12.26; F21M12.27; F21M12.28; F21M12.29; F21M12.30;
F21M12.31; F21M12.32; F21M12.33; F21M12.34; F21M12.35; F21M12.36;
F21M12.37.
F5I14 AC001229 109560bp DNA PLN 11-JUN-1997
Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete
sequence.
HTG; F5I14.1; F5I14.2; F5I14.3; F5I14.4; F5I14.5; F5I14.6; F5I14.7;
F5I14.8; F5I14.9; F5I14.10; F5I14.11; F5I14.12; F5I14.13; F5I14.14;
F5I14.15; F5I14.16; F5I14.17; F5I14.18; F5I14.19; F5I14.20; F5I14.21.
HSCOP1012 AJ000536 494bp DNA PLN 28-JUL-1997
Arabidopsis thaliana COP1 gene, exons 10 to 12.
cop1 gene; exon; COP1; COP1 protein.
HSCOP157 AJ000535 768bp DNA PLN 28-JUL-1997
Arabidopsis thaliana COP1 gene, exons 5 to 7.
cop1 gene; exon; COP1; COP1 protein.
IG002N01 AF007269 124225bp DNA PLN 12-JUN-1997
Arabidopsis thaliana BAC IG002N01.
A_IG002N01.1; A_IG002N01.25; ATMPK4; MAP Kinase; A_IG002N01.26; tRNA-Val;
A_IG002N01.27; A_IG002N01.28; A_IG002N01.22; A_IG002N01.21;
A_IG002N01.3; A_IG002N01.4; A_IG002N01.20; A_IG002N01.19; A_IG002N01.5;
A_IG002N01.32; A_IG002N01.6; A_IG002N01.7; A_IG002N01.8; A_IG002N01.24;
A_IG002N01.9; A_IG002N01.10; A_IG002N01.11; A_IG002N01.18;
A_IG002N01.17; GBF2; Arabidopsis thaliana G-box binding factor 2
(SP:P42774); A_IG002N01.16; A_IG002N01.13; A_IG002N01.14; A_IG002N01.15;
A_IG002N01.31; A_IG002N01.30.
IG002P16 AF007270 110946bp DNA PLN 12-JUN-1997
Arabidopsis thaliana BAC IG002P16.
A_IG002P16.21; A_IG002P16.20; A_IG002P16.1; A_IG002P16.3; A_IG002P16.4;
A_IG002P16.5; A_IG002P16.6; A_IG002P16.7; A_IG002P16.24; A_IG002P16.23;
A_IG002P16.19; A_IG002P16.25; A_IG002P16.8; A_IG002P16.18; A_IG002P16.9;
A_IG002P16.22; A_IG002P16.17; A_IG002P16.16; A_IG002P16.10;
A_IG002P16.12; A_IG002P16.15; A_IG002P16.13; A_IG002P16.14.
IG005I10 AF013293 111906bp DNA PLN 12-JUL-1997
Arabidopsis thaliana BAC IG005I10.
A_IG005I10.1; A_IG005I10.24; A_IG005I10.23; A_IG005I10.2; A_IG005I10.3;
A_IG005I10.5; A_IG005I10.4; A_IG005I10.6; A_IG005I10.22; A_IG005I10.nn;
A_IG005I10.21; A_IG005I10.20; A_IG005I10.19; A_IG005I10.8;
A_IG005I10.18; A_IG005I10.17; A_IG005I10.16; A_IG005I10.9;
A_IG005I10.10; A_IG005I10.11; A_IG005I10.15; A_IG005I10.12;
A_IG005I10.13; A_IG005I10.14.
TM018A10 AF013294 106184bp DNA PLN 12-JUL-1997
Arabidopsis thaliana BAC TM018A10.
tRNA-Gln; A_TM018A10.1; A_TM018A10.18; A_TM018A10.19; A_TM018A10.2;
A_TM018A10.17; A_TM018A10.16; A_TM018A10.3; A_TM018A10.4; A_TM018A10.5;
A_TM018A10.6; A_TM018A10.7; AT0ZI1; A_TM018A10.22; A_TM018A10.8;
A_TM018A10.14; A_TM018A10.13; A_TM018A10.9; A_TM018A10.23;
A_TM018A10.24; A_TM018A10.12; A_TM018A10.11; A_TM018A10.20;
A_TM018A10.10.
TM021B04 AF007271 90019bp DNA PLN 12-JUN-1997
Arabidopsis thaliana BAC TM021B04.
A_TM021B04.11; A_TM021B04.14; A_TM021B04.10; A_TM021B04.9; A_TM021B04.8;
A_TM021B04.7; A_TM021B04.15; A_TM021B04.6; A_TM021B04.1; A_TM021B04.5;
A_TM021B04.4; A_TM021B04.13; A_TM021B04.16; A_TM021B04.12; A_TM021B04.2;
A_TM021B04.3.
To obtain any Arabidopsis DNA sequence use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
World Wide Web servers for sequences:
BLAST & FASTA: http://genome-www.stanford.edu/Arabidopsis/
NCBI (GenBank): http://www.ncbi.nlm.nih.gov/Web/Search/
EBI (EMBL): http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
DDBJ: http://www.nig.ac.jp/
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