New Arabidopsis DNA 13-Sep-1997 2/3

AtDB Project arabidopsis-seq at genome.Stanford.EDU
Thu Sep 18 20:41:05 EST 1997


AF004213    AF004213     2225bp    mRNA     PLN      03-JUL-1997
    Arabidopsis thaliana ethylene-insensitive3-like1 (EIL1) mRNA, complete
     cds.
    EIL1; ethylene-insensitive3-like1.

AF004214    AF004214     1722bp    mRNA     PLN      03-JUL-1997
    Arabidopsis thaliana ethylene-insensitive3-like2 (EIL2) mRNA, complete
     cds.
    EIL2; ethylene-insensitive3-like2.

AF004215    AF004215     2058bp    mRNA     PLN      03-JUL-1997
    Arabidopsis thaliana ethylene-insensitive3-like3 (EIL3) mRNA, complete
     cds.
    EIL3; ethylene-insensitive3-like3.

AF004216    AF004216     2310bp    mRNA     PLN      03-JUL-1997
    Arabidopsis thaliana ethylene-insensitive3 (EIN3) mRNA, complete cds.
    EIN3; ethylene-insensitive3.

AF004217    AF004217     3387bp    DNA      PLN      03-JUL-1997
    Arabidopsis thaliana ethylene-insensitive3 (EIN3) gene, complete cds.
    EIN3; ethylene-insensitive3.

AF004393    AF004393     1072bp    mRNA     PLN      09-JUL-1997
    Arabidopsis thaliana salt-stress induced tonoplast intrinsic protein
     mRNA, complete cds.
    salt-stress induced tonoplast intrinsic protein.

AF004396    AF004396     2987bp    DNA      PLN      01-JUL-1997
    Arabidopsis thaliana squalene synthase 2 (SQS2) gene, complete cds.
    SQS2; squalene synthase 2.

AF004560    AF004560     3565bp    DNA      PLN      02-JUL-1997
    Arabidopsis thaliana squalene synthase 1 gene, complete cds.
    squalene synthase 1.

AF009631    AF009631     1662bp    mRNA     PLN      23-JUL-1997
    Arabidopsis thaliana AP47/50p mRNA, complete cds.
    AP47/50p.

AF009647    AF009647     2448bp    mRNA     PLN      23-JUL-1997
    Arabidopsis thaliana arginine decarboxylase (spe2) mRNA, complete cds.
    spe2; arginine decarboxylase.

AF009954    AF009954     3200bp    DNA      PLN      05-AUG-1997
    Arabidopsis thaliana phytoene synthase (PSY) gene, complete cds.
    PSY; phytoene synthase.

AF013627    AF013627     1393bp    mRNA     PLN      07-AUG-1997
    Arabidopsis thaliana reversibly glycosylated protein-1 (AtRGP) mRNA,
     complete cds.
    AtRGP; reversibly glycosylated protein-1.

AF013628    AF013628     1401bp    mRNA     PLN      07-AUG-1997
    Arabidopsis thaliana reversibly glycosylated protein-2 (AtRGP) mRNA,
     complete cds.
    AtRGP; reversibly glycosylated protein-2.

ATABI2DNA   Y08966     1730bp    DNA      PLN      10-JUN-1997
    A.thaliana gene encoding ABI2 protein.
    ABA response; ABI2 gene; protein phosphatase 2C; abi2; ABI2 protein
     phosphatase 2C.

ATABI2RNA   Y08965     1470bp    RNA      PLN      10-JUN-1997
    A.thaliana mRNA for ABI2 protein.
    ABA response; ABI2 gene; protein phosphatase 2C; abi2; ABI2 protein
     phosphatase 2C.

ATAC001645  AC001645    91714bp    DNA      PLN      22-JUL-1997
    Arabidopsis thaliana chromosome III BAC T02O04 genomic sequence, complete
     sequence.
    HTG; T02O04.1; T02O04.2; mitochondrial processing peptidase alpha subunit
     precusor isolog; T02O04.3; jasmonate inducible protein isolog; T02O04.4;
     T02O04.5; T02O04.6; T02O04.7; T02O04.8; T02O04.9; T02O04.10; T02O04.11;
     T02O04.12; T02O04.13; poly(A)-binding protein isolog; T02O04.14;
     Proline-rich protein APG isolog; T02O04.15; T02O04.16; Myb-related
     transcription activator (MybSt1) isolog; T02O04.17; ABC transporter
     (PDR5-like) isolog; T02O04.18; T02O04.19; DNA binding protein (CDC27SH)
     isolog; T02O04.20; T02O04.21; cell division protein FtsH isolog;
     T02O04.22; transcription factor (TINY) isolog; T02O04.23.

ATAC002333  AC002333    98734bp    DNA      PLN      24-JUL-1997
    Arabidopsis thaliana chromosome II BAC F18O19 genomic sequence, complete
     sequence.
    HTG; F18O19.1; polygalacturonase isolog, 3' partial; F18O19.2;
     polygalacturonase isolog; F18O19.3; F18O19.4; CTR1 protein kinase
     isolog; F18O19.5; indole-3-acetate beta-glucosyltransferase isolog;
     F18O19.6; STE11 protein kinase isolog; F18O19.7; F18O19.8; Sm protein F
     isolog; F18O19.9; F18O19.10; MAP Kinase 6; F18O19.11; F18O19.12; beta
     transducin isolog; F18O19.13; molybdenum cofactor biosynthesis protein E
     isolog; F18O19.14; cysteine synthase, cpACS1; F18O19.15; F18O19.16;
     F18O19.17; F18O19.18; stearoyl-ACP desaturase; F18O19.19; LecRK1 protein
     kinase isolog; F18O19.20; F18O19.21; SF16 isolog; F18O19.22; Glucan
     endo-1,3-beta glucosidase isolog; F18O19.23; F18O19.24; F18O19.25;
     signal recognition particle protein 14; F18O19.26; F18O19.27;
     endochitinase isolog; F18O19.28; F18O19.29; F18O19.30; F18O19.31;
     F18O19.32.

ATAC002335  AC002335   102057bp    DNA      PLN      31-JUL-1997
    Arabidopsis thaliana chromosome II BAC T01O24 genomic sequence, complete
     sequence.
    HTG; T01O24.1; MYB transcription factor isolog; T01O24.2; T01O24.3;
     calcium binding protein isolog; T01O24.4; tRNA-Thr; T01O24.5; T01O24.6;
     T01O24.7; membrane transporter D1 isolog; T01O24.8; T01O24.9;
     glutathione perosidase isolog; T01O24.10; biotin synthase (Bio B);
     T01O24.11; small nuclear ribonucleoprotein isolog; T01O24.12; T01O24.13;
     T01O24.14; electron transfer flavoprotein ubiquinone oxidoreductase
     isolog; T01O24.15; T01O24.16; putative 3-beta hydroxy-5-ene steriod
     dehydrogenase isolog; T01O24.17; glyoxalase II isolog; T01O24.18;
     T01O24.19; T01O24.20; ribosomal protein L38 isolog; T01O24.21;
     T01O24.22; peroxidase isolog; T01O24.23; T01O24.24; T01O24.25; trypsin
     inhibitor isolog; T01O24.26; T01O24.27; trypsin inhibitor 2 precursor
     isolog; T01O24.28; T01O24.29; T01O24.30; FKBP type peptidyl-prolyl
     cis-trans isomerase isolog; T01O24.31; endochitinase isolog; T01O24.32;
     T01O24.33; T01O24.34.

ATAC002337  AC002337    88068bp    DNA      PLN      23-JUL-1997
    Arabidopsis thaliana chromosome II BAC T08I13 genomic sequence, complete
     sequence.
    HTG; T08I13.1; ADP-ribosylation factor; T08I13.2; water stress-induced
     protein, WSI76 isolog; T08I13.3; Atmyb2; T08I13.4; T08I13.5; T08I13.6;
     polyribonucleotide phosphorylase isolog; T08I13.7; T08I13.8; acyl-CoA
     synthetase isolog; T08I13.9; RNA helicase isolog; T08I13.10; DNA binding
     protein isolog; T08I13.11; T08I13.12; pectinesterase isolog; T08I13.13;
     T08I13.14; T08I13.15; FCA gamma isolog; T08I13.16; peptidyl-prolyl
     cis-trans isomerase isolog; T08I13.17; T08I13.18; T08I13.19; T08I13.20;
     T08I13.21; T08I13.22; cytochrome c oxidase Vc subunit isolog; T08I13.23;
     T08I13.24; chloroplast protein CP12 isolog; T08I13.25; G-beta-repeat
     containing protein isolog.

ATAC002343  AC002343   116156bp    DNA      PLN      22-JUL-1997
    Arabidopsis thaliana BAC T19F06 genomic sequence, complete sequence.
    HTG; T19F06.1; HSP90 isolog; T19F06.2; thaumatin isolog; T19F06.3;
     kinesin heavy chain isolog; T19F06.4; T19F06.5; T19F06.6; T19F06.7;
     T19F06.8; T19F06.9; T19F06.10; Ser/Thr protein kinase isolog; T19F06.11;
     2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase isolog; T19F06.12;
     T19F06.13; zinc finger protein isolog; T19F06.14; ribitol dehydrogenase
     isolog; T19F06.15; trehalase precusor isolog; T19F06.23; tRNA-Gly;
     T19F06.16; T19F06.17; cellulose synthase isolog; T19F06.18; T19F06.19;
     T19F06.20; auxin inducible protein isolog; T19F06.21; T19F06.22; cell
     division protein isolog.

ATAF002109  AF002109   108847bp    DNA      PLN      04-AUG-1997
    Arabidopsis thaliana chromosome II BAC T28M21 genomic sequence.
    HTG; T28M21.1; 5' partial cucumisin serine protease isolog; T28M21.2;
     tRNA-Asp; T28M21.3; T28M21.4; T28M21.5; T28M21.6; T28M21.7; T28M21.8;
     T28M21.9; T28M21.10; T28M21.11; T28M21.12; T28M21.13; T28M21.14;
     T28M21.15; T28M21.16; T28M21.17; T28M21.18; T28M21.19; T28M21.20;
     T28M21.21; T28M21.22; T28M21.23; T28M21.24; T28M21.25.

ATAKLYS1    X98873     1980bp    RNA      PLN      02-JUL-1997
    A.thaliana mRNA for aspartate kinase.
    ak-lys1 gene; aspartate kinase; ak-lys1.

ATAMT1      X75879     1700bp    RNA      PLN      11-JUN-1997
    A.thaliana amt1 mRNA.
    amt1 gene; amt1.

ATAPCYT     X98275      756bp    RNA      PLN      08-SEP-1997
    A.thaliana mRNA for ascorbate peroxidase, cytosolic (APX2).
    ascorbate peroxidase; L-ascorbate peroxidase.

ATAPEXT     X98276     1045bp    RNA      PLN      08-SEP-1997
    A.thaliana mRNA for ascorbate peroxidase, extraplastidal (membrane bound)
     (APX3).
    ascorbate peroxidase; L-ascorbate peroxidase.

ATAPX       X98003     1127bp    RNA      PLN      04-SEP-1997
    A.thaliana mRNA for ascorbate peroxidase.
    APX gene; ascorbate peroxidase; APX.

ATBFRUCT    X89454     1960bp    RNA      PLN      05-AUG-1997
    A.thaliana mRNA for Beta-fructosidase.
    beta-fructofuranosidase; beta-fructosidase; Beta-fruct.

ATCHLGPX1   AJ000469      962bp    RNA      PLN      22-JUL-1997
    Arabidopsis thaliana chloroplast mRNA for glutathione peroxidase.
    chloroplast; glutathione peroxidase; GPX1 gene; GPX1.

ATCM4GENE   X90382     1303bp    RNA      PLN      23-JUL-1997
    A.thaliana DNA for cM4 gene.
    cM4 gene; myb-repeat; cM4.

ATCY13GEN   X90387     1547bp    RNA      PLN      23-JUL-1997
    A.thaliana DNA for cY13 gene.
    cY13 gene; myb-repeat; cY13.

ATCYTGPX2   AJ000470      739bp    RNA      PLN      22-JUL-1997
    Arabidopsis thaliana mRNA for cytosolic glutathione peroxidase.
    cytosolic; glutathione peroxidase; Gpx2 gene; GPX2.

ATDAD1      X95585      570bp    RNA      PLN      04-SEP-1997
    A.thaliana mRNA for DAD-1-like protein.
    DAD-1; DAD-1 homologue.

ATDDDRP     Y08722     9080bp    DNA      PLN      29-AUG-1997
    Arabidopsis thaliana rpoPt gene.
    DNA-dependent RNA polymerase; rpoPt gene; rpoPt; chloroplast
     single-subunit DNA-dependent RNA polymerase.

ATDNAJLIK   Y11969     1580bp    RNA      PLN      30-JUN-1997
    A.thaliana mRNA for dnaJ-like protein.
    dnaJ-like protein; J10 gene; J10.

ATEIF4E     Y10548      910bp    RNA      PLN      30-JUL-1997
    A.thaliana mRNA for eIF4E protein.
    eIF4E protein; EIF4E1.

ATEIF4EIS   Y10547      812bp    RNA      PLN      30-JUL-1997
    A.thaliana mRNA for eIF4Eiso protein.
    eIF4Eiso protein; EIF4E2.

ATENRA      Y13860     4198bp    DNA      PLN      17-JUN-1997
    Arabidopsis thaliana enr-A gene.
    enoyl-ACP reductase; enr-A gene; enr-A.

ATFCA0      Z97335   200611bp    DNA      PLN      04-JUL-1997
    Arabidopsis thaliana DNA chromosome 4, ESSA I contig fragment No. 0.
    disease resistance protein homolog; hydroxymethyltransferase;
     adenosylhomocysteinase; hypothetical protein; heat shock transcription
     factor homolog; selenium-binding protein; major latex protein; A6
     anther-specific protein; AMP-binding protein; glucosyltransferase; COP9
     protein; xyloglucan endotransglycosylase-related protein XTR-7; kinesin
     homolog; transport protein; salt-inducible protein homolog;
     ribonucleoprotein homolog.

ATFCA1      Z97336   206606bp    DNA      PLN      04-JUL-1997
    Arabidopsis thaliana DNA chromosome 4, ESSA I contig fragment No. 1.
    ribosomal protein; kinesin homolog; casein kinase I; protein kinase;
     ankyrin homolog; TMV resistance protein homolog; hypothetical protein;
     carnitine racemase homolog; retrovirus-related polyprotein homolog;
     reverse transcriptase-like protein; Ste20-like kinase homolog;
     CCAAT-binding transcription factor subunit A(CBF-A); auxin-responsive
     protein IAA1; acylaminoacyl-peptidase homolog; disease resistance
     protein RPS2 homolog; germin type 2; calmodulin; RNA polymerase II fifth
     largest subunit homolog; heat shock protein; ATP-sulfurylase; light
     induced protein homolog; replication control protein homolog.

ATFCA2      Z97337   202861bp    DNA      PLN      04-JUL-1997
    Arabidopsis thaliana DNA chromosome 4, ESSA I contig fragment No. 2.
    hypothetical protein; centromere protein homolog; protein kinase homolog;
     RNA helicase homolog; proteasome chain protein; cytosolic
     O-acetylserine(thiol)lyase (EC 4.2.99.8); ferredoxin;
     hydroxyproline-rich glycoprotein homolog; imidazoleglycerol-phosphate
     dehydratase; amine oxidase; tubulin alpha-6 chain (TUA6); S-linalool
     synthase homolog; cucumisin; hydroxynitrile lyase; cytochrome P450.

ATFCA3      Z97338   200216bp    DNA      PLN      04-JUL-1997
    Arabidopsis thaliana DNA chromosome 4, ESSA I contig fragment No. 3.
    phosphocholine cytidylyltransferase; hypothetical protein; coll wall
     protein homolog; Nucleotide sequence of a cDNA clone encoding a
     beta-amylase from Arabidopsis thaliana; ABC transporter homolog;
     PDR5-like ABC transporter; glucosyltransferase.

ATFCA4      Z97339   205559bp    DNA      PLN      04-JUL-1997
    Arabidopsis thaliana DNA chromosome 4, ESSA I contig fragment No. 4.
    allene oxide synthase; indole-3-acetate beta-glucosyltransferase;
     pyruvate,orthophosphate dikinase; glutaredoxin; hypothetical protein;
     drought-induced protein.

ATFCA5      Z97340   209165bp    DNA      PLN      04-JUL-1997
    Arabidopsis thaliana DNA chromosome 4, ESSA I contig fragment No. 5.
    ATsEH homolog; hypothetical protein; cysteine proteinase; FCA gamma.

ATFCA6      Z97341   200952bp    DNA      PLN      04-JUL-1997
    Arabidopsis thaliana DNA chromosome 4, ESSA I contig fragment No. 6.
    hypothetical protein; glucosyltransferase homolog; membrane protein
     homolog; proteinase homolog; growth regulator homolog; heat shock
     protein 110 homolog; RNA helicase; cyanohydrin lyase homolog;
     decarboxylase homolog; ribosomal protein; limonene cyclase; limonene
     cyclase homolog; apetala2 domain TINY homolog.

ATFCA7      Z97342   206817bp    DNA      PLN      04-JUL-1997
    Arabidopsis thaliana DNA chromosome 4, ESSA I contig fragment No. 7.
    gibberellin oxidase homolog; DNA-binding homeotic protein Athb-2;
     enoyl-CoA hydratase; hypothetical protein; triacylglycerol lipase
     homolog; nuclear antigen homolog; resistance gene; resistance gene
     homolog; resistance gene homolog (fragment); protein kinase homolog;
     transcription factor homolog; allergen homolog; Clp proteinase homolog;
     Beta-Amylase; serine protease homolog.

ATFCA8      Z97343   207674bp    DNA      PLN      04-JUL-1997
    Arabidopsis thaliana DNA chromosome 4, ESSA I contig fragment No. 8.
    hypothetical protein; GTP-binding RAB2A protein; glucanase homolog;
     farnesyl diphosphate synthase (FPS2) protein; myosin heavy chain
     homolog; myosin II heavy chain homolog; SCARECROW homolog; lactate
     dehydrogenase; asparagine--tRNA ligase homolog; membrane channel
     protein; formyltransferase purU homolog; inositol 2-dehydrogenase
     homolog; ribosomal protein; DNA-binding protein homolog; LTR
     retrotransposon; thioesterase homolog; EREBP-4 homolog;
     carboxyl-terminal proteinase homolog; glycerol-3-phosphate permease
     homolog; protein kinase.

ATFCA9      Z97344    81850bp    DNA      PLN      04-JUL-1997
    Arabidopsis thaliana DNA chromosome 4, ESSA I contig fragment No. 9.
    hypothetical protein; peroxidase; GLABRA2 homolog; syntaxin; PSII D1
     protein processing enzyme; heat shock transcription factor HSF1;
     trehalose-6-phosphate synthase homolog; MYB transcription factor
     homolog; Zn finger protein homolog; acetylornithine deacetylase.

ATFNADPR    Y11866      357bp    RNA      PLN      01-SEP-1997
    A.thaliana mRNA for ferredoxin NADP+ reductase, partial.
    ferredoxin NADP+ reductase.

ATGLP3      Y12673      796bp    RNA      PLN      01-JUL-1997
    A.thaliana mRNA for germin like protein 3.
    germin-like protein; glp3 gene; Glp3 protein; glp3; GLP3 protein.

ATGPCRECP   Y11278     1279bp    RNA      PLN      29-AUG-1997
    A.thaliana mRNA for putative G protein coupled receptor.
    G protein coupled receptor; putative G protein coupled receptor.

ATHASALY    Z97558     1788bp    RNA      PLN      29-JUL-1997
    Arabidopsis thaliana mRNA for argininosuccinate lyase.
    argininosuccinate lyase; AtArgH gene; AtArgH.

ATHATPLC2   D50804     2164bp    mRNA     PLN      13-JUN-1997
    Arabidopsis thaliana mRNA for phosphoinositide specific phospholipase C,
     complete cds.
    AtPLC2; phosphoinositide specific phospholipase C.

ATHB4       Y09582     2040bp    DNA      PLN      05-SEP-1997
    A.thaliana ATHB-4 gene.
    ATHB-4 gene; HD-zip protein; ATHB-4; HD-Zip protein.

ATHDYNAGTP  L36939     2160bp    mRNA     PLN      21-JUL-1997
    Arabidopsis thaliana dynamin-like GTP binding protein mRNA, complete cds.
    dynamin-like GTP binding protein.

ATHMGIYPR   X99116      903bp    RNA      PLN      29-JUL-1997
    A.thaliana mRNA for HMG-I/Y protein.
    HMG-I/Y protein.

ATM1GENE    X90379     2579bp    DNA      PLN      23-JUL-1997
    A.thaliana DNA for M1 gene.
    M1 gene; myb-repeat; M1.

ATM2GENE    X90380     3127bp    DNA      PLN      23-JUL-1997
    A.thaliana DNA for M2 gene.
    M2 gene; myb-repeat; M2.

ATM4GENE    X90381     2841bp    DNA      PLN      23-JUL-1997
    A.thaliana DNA for M4 gene.
    M4 gene; myb-repeat; M4.

ATMTLMHSP   Y11865      204bp    RNA      PLN      01-SEP-1997
    A.thaliana mRNA for mitochondrial LMW heat shock protein.
    LMW heat shock protein; mitochondrial; mitochondrial LMW heat shock
     protein.

ATNOD35     Y11120     1178bp    RNA      PLN      19-JUN-1997
    A.thaliana mRNA for nodulin-35 homologue.
    nodulin-35; nodulin-35 homologue.

ATORPC      X97323     1349bp    RNA      PLN      04-JUL-1997
    A.thaliana mRNA for outward rectifying potassium channel KCO1.
    outward rectifying potassium channel KCO1.

ATPIIIA     X69139      469bp    RNA      PLN      09-SEP-1997
    A.thaliana mRNA for protease inhibitor II.
    protease inhibitor II.

ATRCI1A     X74140     1020bp    RNA      PLN      08-SEP-1997
    A.thaliana RCI1A mRNA.
    RCI1A; RCI14A.

ATRCI2B     X74141     1020bp    RNA      PLN      08-SEP-1997
    A.thaliana RCI1B mRNA.
    RCI1B.

ATRETROTR   Y11864      615bp    RNA      PLN      01-SEP-1997
    A.thaliana retrotranscribed mRNA.
    hypothetical protein.

ATRNAALP1   X99548     2677bp    RNA      PLN      13-JUN-1997
    A.thaliana mRNA for RAP-1 protein.
    DNA-binding protein; Rap-1 gene; Rap-1; bHLH protein.

ATRNAOSM    X89008      906bp    RNA      PLN      15-JUL-1997
    A.thaliana mRNA for osmotin protein.
    osm34 gene; osmotin; osm34.

ATRPOBC1    Y13690     5059bp    DNA      PLN      14-JUL-1997
    Arabidopsis thaliana chloroplast trnC, rpoB & rpoC1 genes.
    DNA-dependent RNA; DNA-dependent RNA polymerase subunit beta; trnC;
     transfer RNA-Cys; rpoB; rpoC1; DNA-dependent RNA polymerase subunit
     beta'.

ATSBE21     AJ000497     7020bp    DNA      PLN      22-JUL-1997
    Arabidopsis thaliana Sbe2.1 gene.
    Sbe2.1 gene; starch branching enzyme II; Sbe2.1; Starch branching enzyme
     II.

ATSCOALA    X69138     1393bp    RNA      PLN      09-SEP-1997
    A.thaliana mRNA for succinate--CoA ligase (GCP-forming).
    succinyl-CoA synthetase alpha; succinate--CoA ligase (GDP-forming).

ATSRP14     Y10116      680bp    RNA      PLN      19-JUN-1997
    A.thaliana mRNA for signal recognition particle subunit 14.
    signal recognition particle subunit 14; SRP14 gene; SRP14.

ATSTASCPX   X98925     1524bp    RNA      PLN      04-SEP-1997
    A.thaliana mRNA for stromal ascorbate peroxidase.
    ascorbate peroxidase; stromal ascorbate peroxidase.






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