New Arabidopsis DNA 05-Dec-1998

AtDB Project arabidopsis-seq at genome.stanford.edu
Sat Dec 5 18:29:36 EST 1998


====================== New DNA Sequences =======================

AB007987    AB007987     1314bp    mRNA     PLN      28-NOV-1998
    Arabidopsis thaliana LIP1 mRNA for Lipoic acid synthase, complete cds.
    LIP1; Lipoic acid synthase.

AB008486    AB008486     1028bp    mRNA     PLN      03-DEC-1998
    Arabidopsis thaliana ARR3 mRNA for response regulator 3, complete cds.
    ARR3; response regulator 3.

AB008487    AB008487     1193bp    mRNA     PLN      03-DEC-1998
    Arabidopsis thaliana ARR4 mRNA for response regulator 4, complete cds.
    response regulator 4; ARR4; Arr4.

AB008488    AB008488      891bp    mRNA     PLN      03-DEC-1998
    Arabidopsis thaliana ARR5 mRNA for response regulator 5, complete cds.
    response regulator 5; ARR5.

AB008489    AB008489      942bp    mRNA     PLN      03-DEC-1998
    Arabidopsis thaliana ARR6 mRNA for response regulator 6, complete cds.
    response regulator 6; ARR6.

AB008490    AB008490      740bp    mRNA     PLN      03-DEC-1998
    Arabidopsis thaliana ARR7 mRNA for response regulator 7, complete cds.
    response regulator 7; ARR7.

AB008491    AB008491     3600bp    DNA      PLN      03-DEC-1998
    Arabidopsis thaliana ARR6 gene for response regulator 6, complete cds.
    response regulator 6; ARR6.

AC006072    AC006072    88455bp    DNA      HTG      29-NOV-1998
    *** SEQUENCING IN PROGRESS *** Arabidopsis thaliana 'TAMU' BAC 'T9J23'
     genomic sequence near marker 'CIC06C03'; HTGS phase 1, 4 unordered
     pieces.
    HTG; HTGS_PHASE1.

AC006081    AC006081    97774bp    DNA      HTG      02-DEC-1998
    *** SEQUENCING IN PROGRESS *** Arabidopsis thaliana 'TAMU' BAC 'T2G17'
     genomic sequence near marker 'mi148'; HTGS phase 1, 10 unordered pieces.
    HTG; HTGS_PHASE1.

AC006085    AC006085   106915bp    DNA      HTG      03-DEC-1998
    *** SEQUENCING IN PROGRESS *** Arabidopsis thaliana chromosome I BAC
     F11M15 genomic sequence; HTGS phase 1, 4 unordered pieces.
    HTG; HTGS_PHASE1.

AF062859    AF062859      897bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB3) mRNA, complete
     cds.
    MYB3; putative transcription factor.

AF062860    AF062860     1003bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB4) mRNA, complete
     cds.
    MYB4; putative transcription factor.

AF062861    AF062861     1010bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB9) mRNA, partial
     cds.
    MYB9; putative transcription factor.

AF062862    AF062862      703bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB10) mRNA, partial
     cds.
    MYB10; putative transcription factor.

AF062863    AF062863     1053bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB11) mRNA, partial
     cds.
    MYB11; putative transcription factor.

AF062864    AF062864     1334bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB12) mRNA, complete
     cds.
    MYB12; putative transcription factor.

AF062865    AF062865      606bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB14) mRNA, partial
     cds.
    MYB14; putative transcription factor.

AF062866    AF062866      891bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB17) mRNA, partial
     cds.
    MYB17; putative transcription factor.

AF062867    AF062867      767bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB18) mRNA, partial
     cds.
    MYB18; putative transcription factor.

AF062868    AF062868      712bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB19) mRNA, partial
     cds.
    MYB19; putative transcription factor.

AF062869    AF062869     1022bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB20) mRNA, complete
     cds.
    MYB20; putative transcription factor.

AF062870    AF062870      658bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB21) mRNA, partial
     cds.
    MYB21; putative transcription factor.

AF062871    AF062871      544bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB27) mRNA, partial
     cds.
    MYB27; putative transcription factor.

AF062872    AF062872     1292bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB29) mRNA, complete
     cds.
    MYB29; putative transcription factor.

AF062873    AF062873     1202bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB30) mRNA, complete
     cds.
    MYB30; putative transcription factor.

AF062874    AF062874      723bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB32) mRNA, partial
     cds.
    MYB32; putative transcription factor.

AF062875    AF062875     1137bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB33) mRNA, partial
     cds.
    MYB33; putative transcription factor.

AF062876    AF062876      811bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB34) mRNA, partial
     cds.
    MYB34; putative transcription factor.

AF062877    AF062877      896bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB35) mRNA, partial
     cds.
    MYB35; putative transcription factor.

AF062878    AF062878     1195bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB36) mRNA, complete
     cds.
    MYB36; putative transcription factor.

AF062879    AF062879     1062bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB37) mRNA, partial
     cds.
    MYB37; putative transcription factor.

AF062880    AF062880      764bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB38) mRNA, partial
     cds.
    MYB38; putative transcription factor.

AF062881    AF062881      716bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB40) mRNA, partial
     cds.
    MYB40; putative transcription factor.

AF062882    AF062882      816bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB41) mRNA, partial
     cds.
    MYB41; putative transcription factor.

AF062883    AF062883      722bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB45) mRNA, partial
     cds.
    MYB45; putative transcription factor.

AF062884    AF062884      853bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB46) mRNA, partial
     cds.
    MYB46; putative transcription factor.

AF062885    AF062885      770bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB47) mRNA, partial
     cds.
    MYB47; putative transcription factor.

AF062886    AF062886      858bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB50) mRNA, partial
     cds.
    MYB50; putative transcription factor.

AF062887    AF062887     1384bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB51) mRNA, complete
     cds.
    MYB51; putative transcription factor.

AF062888    AF062888     1020bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB52) mRNA, complete
     cds.
    MYB52; putative transcription factor.

AF062889    AF062889      972bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB53) mRNA, partial
     cds.
    MYB53; putative transcription factor.

AF062890    AF062890     1041bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB54) mRNA, complete
     cds.
    MYB54; putative transcription factor.

AF062891    AF062891      778bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB56) mRNA, partial
     cds.
    MYB56; putative transcription factor.

AF062892    AF062892      535bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB57) mRNA, partial
     cds.
    MYB57; putative transcription factor.

AF062893    AF062893      824bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB58) mRNA, partial
     cds.
    MYB58; putative transcription factor.

AF062894    AF062894     1024bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB59) mRNA, complete
     cds.
    MYB59; putative transcription factor.

AF062895    AF062895      949bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB60) mRNA, complete
     cds.
    MYB60; putative transcription factor.

AF062896    AF062896     1031bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB61) mRNA, partial
     cds.
    MYB61; putative transcription factor.

AF062897    AF062897      838bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB62) mRNA, partial
     cds.
    MYB62; putative transcription factor.

AF062898    AF062898      910bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB63) mRNA, partial
     cds.
    MYB63; putative transcription factor.

AF062899    AF062899      654bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB65) mRNA, partial
     cds.
    MYB65; putative transcription factor.

AF062900    AF062900      646bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB66) mRNA, partial
     cds.
    MYB66; putative transcription factor.

AF062901    AF062901     1256bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB68) mRNA, complete
     cds.
    MYB68; putative transcription factor.

AF062902    AF062902      882bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB69) mRNA, partial
     cds.
    MYB69; putative transcription factor.

AF062903    AF062903      853bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB70) mRNA, partial
     cds.
    MYB70; putative transcription factor.

AF062904    AF062904      664bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB71) mRNA, partial
     cds.
    MYB71; putative transcription factor.

AF062905    AF062905      830bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB72) mRNA, partial
     cds.
    MYB72; putative transcription factor.

AF062906    AF062906     1014bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB73) mRNA, partial
     cds.
    MYB73; putative transcription factor.

AF062907    AF062907      900bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB74) mRNA, partial
     cds.
    MYB74; putative transcription factor.

AF062908    AF062908      925bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB75) mRNA, complete
     cds.
    MYB75; putative transcription factor.

AF062909    AF062909      771bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB78) mRNA, partial
     cds.
    MYB78; putative transcription factor.

AF062910    AF062910      343bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB79) mRNA, partial
     cds.
    MYB79; putative transcription factor.

AF062911    AF062911      948bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB81) mRNA, partial
     cds.
    MYB81; putative transcription factor.

AF062912    AF062912      504bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB82) mRNA, partial
     cds.
    MYB82; putative transcription factor.

AF062913    AF062913     1005bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB86) mRNA, partial
     cds.
    MYB86; putative transcription factor.

AF062914    AF062914      862bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB87) mRNA, partial
     cds.
    MYB87; putative transcription factor.

AF062915    AF062915     1033bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB90) mRNA, complete
     cds.
    MYB90; putative transcription factor.

AF062916    AF062916     1493bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB92) mRNA, complete
     cds.
    MYB92; putative transcription factor.

AF062917    AF062917     1023bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB93) mRNA, partial
     cds.
    MYB93; putative transcription factor.

AF062918    AF062918     1505bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana putative transcription factor (MYB94) mRNA, complete
     cds.
    MYB94; putative transcription factor.

AF069497    AF069497     1498bp    mRNA     PLN      02-DEC-1998
    Arabidopsis thaliana pelota (PEL1) mRNA, complete cds.
    PEL1; pelota.

AF089710    AF089710    15000bp    DNA      PLN      04-DEC-1998
    Arabidopsis thaliana disease resistance protein RPP8 (RPP8) gene,
     complete cds.
    RPP8; disease resistance protein RPP8; RPH8A.

AF100166    AF100166     1790bp    mRNA     PLN      26-NOV-1998
    Arabidopsis thaliana phytochrome interacting factor 3 (PIF3) mRNA,
     complete cds.
    PIF3; phytochrome interacting factor 3.

ATH131205   AJ131205     1265bp    mRNA     PLN      27-NOV-1998
    Arabidopsis thaliana mitochondrial mRNA for NAD-dependent malate
     dehydrogenase.
    NAD-dependent malate dehydrogenase; NAD-MDH.

ATH131206   AJ131206     1245bp    mRNA     PLN      27-NOV-1998
    Arabidopsis thaliana microbody mRNA for NAD-dependent malate
     dehydrogenase.
    NAD-dependent malate dehydrogenase; NAD-MDH.

ATJ004881   AJ004881     1396bp    mRNA     PLN      27-NOV-1998
    Arabidopsis thaliana mRNA for Immutans protein.
    Immutans protein; immutans.

==================== Updated DNA Sequences =====================

AC005898    AC005898    74480bp    DNA      HTG      01-DEC-1998
    *** SEQUENCING IN PROGRESS *** Arabidopsis thaliana 'TAMU' BAC 'T6C20'
     genomic sequence near marker 'g4532'; HTGS phase 1, 11 unordered pieces.
    HTG; HTGS_PHASE1.

AC005957    AC005957   126441bp    DNA      HTG      03-DEC-1998
    *** SEQUENCING IN PROGRESS *** Arabidopsis thaliana 'TAMU' BAC 'T15J14'
     genomic sequence near marker 'mi398'; HTGS phase 1, 4 unordered pieces.
    HTG; HTGS_PHASE1.

=========== Updated Sequence Features/Annotations  =============

AB016819    AB016819     1687bp    mRNA     PLN      04-DEC-1998
    Arabidopsis thaliana mRNA for UDP-glucose glucosyltransferase, complete
     cds.
    UDP-glucose glucosyltransferase.

AB017331    AB017331     4791bp    DNA      PLN      01-DEC-1998
    Arabidopsis thaliana gene for 6-4 photolyase, complete cds.
    6-4 photolyase; UVR3.

AC002328    AC002328   109160bp    DNA      PLN      03-DEC-1998
    Genomic sequence for Arabidopsis thaliana BAC F20N2, complete sequence.
    HTG; F20N2.1; F20N2.2; F20N2.3; F20N2.4; F20N2.5; F20N2.6; F20N2.7;
     F20N2.8; F20N2.9; F20N2.10; F20N2.11; F20N2.12; F20N2.13; F20N2.14;
     F20N2.15; F22O2.16; F22O2.17; F22O2.18; F22O2.19; F22O2.20; F22O2.21;
     F22O2.22; F22O2.23; F22O2.24; F22O2.25; F22O2.26; F22O2.27.

AC004557    AC004557    99689bp    DNA      PLN      01-DEC-1998
    Genomic sequence for Arabidopsis thaliana BAC F17L21, complete sequence.
    HTG; F17L21.1; F17L21.2; F17L21.3; F17L21.4; F17L21.5; F17L21.6;
     F17L21.7; F17L21.8; F17L21.9; F17L21.10; F17L21.11; F17L21.12;
     F17L21.13; F17L21.14; F17L21.15; F17L21.16; F17L21.17; F17L21.18;
     F17L21.19; F17L21.20; F17L21.21; F17L21.22; F17L21.23; F17L21.24;
     F17L21.25; F17L21.26; F17L21.27; F17L21.28; F17L21.29; F17L21.30.

AC005106    AC005106    84203bp    DNA      PLN      01-DEC-1998
    Genomic sequence for Arabidopsis thaliana BAC T25N20, complete sequence.
    HTG; T25N20.1; T25N20.2; T25N20.3; T25N20.4; T25N20.5; T25N20.6;
     T25N20.7; T25N20.8; T25N20.9; T25N20.10; T25N20.11; T25N20.12;
     T25N20.13; T25N20.14; T25N20.15; T25N20.16; T25N20.17; T25N20.18;
     T25N20.19; T25N20.20; T25N20.21.

ATHGLAB     L32873     7710bp    DNA      PLN      30-NOV-1998
    Arabidopsis thaliana homeodomain protein (GLABRA2) gene, complete cds.
    GLABRA2; homeodomain protein.


NOTE: This message does not list any new Arabidopsis EST or BAC end
sequences.  However, both of those sequences are added to the BLAST
and FASTA databases available for searching via the AtDB Web Site.

To obtain any Arabidopsis DNA sequence use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web servers for sequences:
  BLAST & FASTA:  http://genome-www.stanford.edu/Arabidopsis/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://www.nig.ac.jp/




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