Updated SNP table from TAIR

Leonore Reiser lreiser at acoma.Stanford.EDU
Wed Dec 22 13:24:08 EST 1999


        The SNP table at TAIR (http://arabidopsis.org/SNPs.html) has been
updated to include data on restriction site polymorphisms between the Col
and Ler ecotypes. Both the Col and Ler sequences were analyzed using the
TAIR Restriction Anaysis Program to generate restriction maps for the SNP
sequence. The two maps for each SNP  were compared and polymorphic sites
identified.
         This new information can be used to design CAPs markers from the
SNP sequences. We would appreciate hearing about any
new markers that were
developed from the SNP data.
        Stay tuned to the SNP tale for RI map positions.



-------------------------------------------------------------------------------
Leonore Reiser                        	lreiser at stanford.edu
The Arabidopsis Information Resource	FAX: (650) 325-6857
Carnegie Institution of Washington	Tel: (650) 325-1521 ext. 311
Department of Plant Biology		URL: http://arabidopsis.org/
260 Panama St.
Stanford, CA 94305
-------------------------------------------------------------------------------
Note:  On September 1, 1999 AtDB was replaced by TAIR (The Arabidopsis
Information Resource) at http://arabidopsis.org/  Please edit your AtDB
bookmarks.  The AtDB website at http://genome-www.stanford.edu/Arabidopsis/
will be phased out over the next few months.



---






More information about the Arab-gen mailing list