New Arabidopsis DNA 02-Oct-1999

AtDB Project arabidopsis-seq at genome.stanford.edu
Sun Oct 3 18:24:25 EST 1999


====================== New DNA Sequences =======================

AB005903    AB005903      622bp    mRNA     PLN      28-SEP-1999
    Arabidopsis thaliana mRNA for AtPHa, complete cds.
    AtPHa.

AC009519    AC009519   112431bp    DNA      HTG      28-SEP-1999
    Arabidopsis thaliana chromosome 1 clone F1N19, WORKING DRAFT SEQUENCE, 2
     ordered pieces.
    HTG; HTGS_PHASE2.

AC010675    AC010675    90961bp    DNA      HTG      25-SEP-1999
    Arabidopsis thaliana chromosome I clone TAMU-T17F3, WORKING DRAFT
     SEQUENCE, 2 unordered pieces.
    HTG; HTGS_PHASE1.

AC010704    AC010704   110455bp    DNA      HTG      28-SEP-1999
    Arabidopsis thaliana chromosome I clone TAMU-T5M16, WORKING DRAFT
     SEQUENCE, 1 ordered pieces.
    HTG; HTGS_PHASE2.

AC010718    AC010718   126638bp    DNA      HTG      28-SEP-1999
    Arabidopsis thaliana chromosome I clone IGF-F28O16, WORKING DRAFT
     SEQUENCE, 12 unordered pieces.
    HTG; HTGS_PHASE1.

AC010924    AC010924    92857bp    DNA      HTG      28-SEP-1999
    Arabidopsis thaliana chromosome 1 clone T24D18, WORKING DRAFT SEQUENCE, 2
     unordered pieces.
    HTG; HTGS_PHASE1.

AC010926    AC010926   113854bp    DNA      HTG      28-SEP-1999
    Arabidopsis thaliana chromosome I clone IGF-F28P22, WORKING DRAFT
     SEQUENCE, 3 unordered pieces.
    HTG; HTGS_PHASE1.

AC010927    AC010927    98062bp    DNA      HTG      28-SEP-1999
    Arabidopsis thaliana chromosome III clone TAMU-T22K18, WORKING DRAFT
     SEQUENCE, 1 ordered pieces.
    HTG; HTGS_PHASE2.

AF162150    AF162150     1284bp    mRNA     PLN      28-SEP-1999
    Arabidopsis thaliana COP1-interacting protein CIP8 mRNA, complete cds.
    COP1-interacting protein CIP8.

ATH011603   AJ011603     1354bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana mRNA for cysteine synthase.
    cysteine synthase; oas3 gene; oas3.

ATH011609   AJ011609     1080bp    DNA      PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) spl5 gene, exons 1-2.
    spl5 gene; squamosa promoter binding protein-like 5; spl5.

ATH011610   AJ011610      855bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Landsberg erecta) mRNA for squamosa
     promoter binding protein-like 5.
    spl5 gene; squamosa promoter binding protein-like 5; spl5.

ATH011611   AJ011611     1186bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Landsberg erecta) mRNA for squamosa
     promoter binding protein-like 7, partial.
    spl7 gene; squamosa promoter binding protein-like 7; spl7.

ATH011612   AJ011612     2462bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) mRNA for squamosa promoter
     binding protein-like 7.
    spl7 gene; squamosa promoter binding protein-like 7; spl7.

ATH011613   AJ011613     4920bp    DNA      PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) spl7 gene, exons 1-10.
    spl7 gene; squamosa promoter binding protein-like 7; spl7.

ATH011624   AJ011624     3501bp    DNA      PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) spl2 gene, exons 1-5.
    spl2 gene; squamosa promoter binding protein-like 2; spl2.

ATH011625   AJ011625     1669bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Landsberg erecta) mRNA for squamosa
     promoter binding protein-like 2.
    spl2 gene; squamosa promoter binding protein-like 2; spl2.

ATH011626   AJ011626     1468bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) mRNA for squamosa promoter
     binding protein-like 2.
    spl2 gene; squamosa promoter binding protein-like 2; spl2.

ATH011627   AJ011627     1329bp    DNA      PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) spl3 gene, exons 1-2.
    SPL3 gene; squamosa promoter binding protein-like 3; spl3.

ATH011628   AJ011628     3364bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Landsberg erecta) mRNA for squamosa
     promoter binding protein-like 1.
    SPL1 gene; squamosa promoter binding protein-like 1; spl1.

ATH011629   AJ011629     2837bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) mRNA for squamosa promoter
     binding protein-like 1.
    SPL1 gene; squamosa promoter binding protein-like 1; spl1.

ATH011630   AJ011630      885bp    DNA      PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) spl4 gene, exons 1-2.
    spl4 gene; squamosa promoter binding protein-like 4; spl4.

ATH011631   AJ011631      713bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) mRNA for squamosa promoter
     binding protein-like 4.
    spl4 gene; squamosa promoter binding protein-like 4; spl4.

ATH011632   AJ011632      744bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Landsberg erecta) mRNA for squamosa
     promoter binding protein-like 4, partial.
    spl4 gene; squamosa promoter binding protein-like 4; spl4.

ATH011633   AJ011633      632bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Landsberg erecta) mRNA for squamosa
     promoter binding protein-like 3.
    SPL3 gene; squamosa promoter binding protein-like 3; spl3.

ATH011634   AJ011634     2860bp    DNA      PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) spl11 gene, exons 1-4.
    spl11 gene; squamosa promoter binding protein-like 11; spl11.

ATH011635   AJ011635     1275bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) mRNA for squamosa promoter
     binding protein-like 11.
    spl11 gene; squamosa promoter binding protein-like 11; spl11.

ATH011636   AJ011636     2700bp    DNA      PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) spl10 gene, exons 1-4.
    spl10 gene; squamosa promoter binding protein-like 10; spl10.

ATH011637   AJ011637     1298bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) mRNA for squamosa promoter
     binding protein-like 10.
    spl10 gene; squamosa promoter binding protein-like 10; spl10.

ATH011638   AJ011638     1282bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) mRNA for squamosa promoter
     binding protein-like 9.
    spl9 gene; squamosa promoter binding protein-like 9; spl9.

ATH011639   AJ011639     1411bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Landsberg erecta) mRNA for squamosa
     promoter binding protein-like 9.
    spl9 gene; squamosa promoter binding protein-like 9; spl9.

ATH011640   AJ011640     3180bp    DNA      PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) spl9 gene, exons 1-3.
    spl9 gene; squamosa promoter binding protein-like 9; spl9.

ATH011641   AJ011641     2580bp    DNA      PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) spl8 gene, exons 1-3.
    spl8 gene; squamosa promoter binding protein-like 8; spl8.

ATH011642   AJ011642     1137bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) mRNA for squamosa promoter
     binding protein-like 8.
    spl8 gene; squamosa promoter binding protein-like 8; spl8.

ATH011643   AJ011643     1505bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) mRNA for squamosa promoter
     binding protein-like 6.
    spl6 gene; squamosa promoter binding protein-like 6; spl6.

ATH011644   AJ011644     1996bp    DNA      PLN      26-SEP-1999
    Arabidopsis thaliana (ecotype Columbia) spl6 gene, exons 1-3.
    spl6 gene; squamosa promoter binding protein-like 6; spl6.

ATH132237   AJ132237     2789bp    DNA      PLN      26-SEP-1999
    Arabidopsis thaliana ger3 gene.
    ger3 gene; GER3 protein; ger3.

ATHY18470   Y18470     8144bp    DNA      PLN      26-SEP-1999
    Arabidopsis thaliana xpo1 gene.
    CRM1-like protein; Exportin1 (XPO1) protein; xpo1 gene; xpo1.

==================== Updated DNA Sequences =====================

AC007915    AC007915   139007bp    DNA      HTG      28-SEP-1999
    Arabidopsis thaliana chromosome 1 clone F27F5, WORKING DRAFT SEQUENCE, 2
     ordered pieces.
    HTG; HTGS_PHASE2.

=========== Updated Sequence Features/Annotations  =============

ATH243812   AJ243812     2795bp    DNA      PLN      26-SEP-1999
    Arabidopsis thaliana gsh2 gene for glutathione synthetase.
    glutathione synthetase; gsh2 gene; gsh2.

ATH243813   AJ243813     1745bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana mRNA for glutathione synthetase (gsh2 gene).
    glutathione synthetase; gsh2 gene; gsh2.

ATH243822   AJ243822     2574bp    mRNA     PLN      26-SEP-1999
    Arabidopsis thaliana mRNA for Mre11 protein (MRE11 gene).
    MRE11 gene; Mre11 protein; MRE11.


NOTE: This message does not list any new Arabidopsis EST or BAC end
sequences.  However, both of those sequences are added to the BLAST
and FASTA databases available for searching via the AtDB Web Site.

To obtain any Arabidopsis DNA sequence use the NCBI retrieve e-mail
server, retrieve at ncbi.nlm.nih.gov - send the word help and
instructions will be returned.
  World Wide Web servers for sequences:
  BLAST & FASTA:  http://genome-www.stanford.edu/Arabidopsis/
 NCBI (GenBank):  http://www.ncbi.nlm.nih.gov/Web/Search/
     EBI (EMBL):  http://www.ebi.ac.uk/ebi_docs/embl_db/ebi/topembl.html
           DDBJ:  http://www.nig.ac.jp/




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