New/Updated Arabidopsis DNA 29-Apr-2000
curator at arabidopsis.org
curator at arabidopsis.org
Sat Apr 29 09:31:40 EST 2000
Dear Arabidopsis researchers,
The following information is the number of Arabidopsis entries in GenBank
that are new or were updated in the last week. These sequences have been
updated in TAIR and are available for searching using TAIR BLAST and FASTA
at:
http://arabidopsis.org/blast/
http://arabidopsis.org/cgi-bin/fasta/TAIRfasta.pl
New sequences : 8
Updated sequences : 0
Updated annotation : 61
====================== New DNA Sequences =======================
AB041530 AB041530 1880bp mRNA PLN 15-APR-2000
Arabidopsis thaliana APRR1 mRNA for pseudo-response regulator 1, complete
cds.
pseudo-response regulator 1; APRR1.
AB041531 AB041531 1490bp mRNA PLN 15-APR-2000
Arabidopsis thaliana APRR2 mRNA for pseudo-response regulator 2, complete
cds.
pseudo-response regulator 2; APRR2.
AB041532 AB041532 1400bp mRNA PLN 15-APR-2000
Arabidopsis thaliana ARR11 mRNA for response regulator 11, complete cds.
response regulator 11; ARR11.
AB041766 AB041766 420bp mRNA PLN 20-APR-2000
Arabidopsis thaliana AHP4 mRNA for HPt phosphotransmitter, complete cds.
AHP4; HPt phosphotransmitter.
AB041767 AB041767 510bp mRNA PLN 20-APR-2000
Arabidopsis thaliana AHP5 mRNA for HPt phosphotransmitter, complete cds.
AHP5; HPt phosphotransmitter.
ATF14L2 AL353818 107027bp DNA PLN 20-APR-2000
Arabidopsis thaliana DNA chromosome 3, BAC clone F14L2
bZIP transcription factor-like protein; F14L2_10; putative protein;
F14L2_20; disease resistance protein-like; F14L2_30; F14L2_40; F14L2_50;
F14L2_60; F14L2_70; WD repeat domain protein; F14L2_80; acyl CoA
reductase-protein; F14L2_90; acyl CoA reductase-like protein; F14L2_100;
F14L2_110; F14L2_120; F14L2_130; acidic ribosomal protein P2-like;
F14L2_140; F14L2_150.
ATF26G5 AL353814 102873bp DNA PLN 20-APR-2000
Arabidopsis thaliana DNA chromosome 3, BAC clone F26G5
putative protein; F26G5_10; F26G5_20; F26G5_30; F26G5_40; F26G5_50; dnaJ
protein homolog atj3; F26G5_60; F26G5_70; F26G5_80; valine-rich protein;
F26G5_90; F26G5_100; F26G5_110; F26G5_120; F26G5_130; F26G5_140; protein
kinase-like protein; F26G5_150; hypothetical protein; F26G5_160.
AC061957 AC061957 89904bp DNA HTG 21-APR-2000
Arabidopsis thaliana chromosome 1 clone F22L4, *** SEQUENCING IN PROGRESS
***, 4 unordered pieces.
HTG; HTGS_PHASE1.
=========== Updated Sequence Features/Annotations =============
D89341 D89341 4484bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for luminal binding protein, complete cds.
BiP; luminal binding protein.
D89342 D89342 4631bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for luminal binding protein, complete cds.
BiP; luminal binding protein.
D83511 D83511 3664bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for ATMYC1, complete cds.
ATMYC1; Atmyc1.
D89620 D89620 4920bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for glutathione reductase, complete cds.
glutathione reductase; glutathione reductase precursor.
AB003522 AB003522 1192bp ds-DNA PLN 15-APR-2000
Arabidopsis thaliana leucoplast genes for larger subunit of Rubisco, beta
subunit of coupling factor one, partial cds.
beta subunit of coupling factor one; atpB; larger subunit of Rubisco;
rbcL.
AB003590 AB003590 5045bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for sulfate transporter, complete cds.
sulfate transporter.
D86932 D86932 1619bp DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for terminal flower1, complete cds.
terminal flower1.
D87130 D87130 1172bp DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for terminal flower1, complete cds.
terminal flower1.
D87519 D87519 1172bp DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for terminal flower1, complete cds.
terminal flower1.
D86608 D86608 5796bp DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for inorganic phosphate transporter, complete
cds.
Inorganic phosphate transporter; PHT1.
D11352 D11352 6533bp DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for CCT alpha/TCP-1, complete cds.
CCT alpha/TCP-1.
AB004872 AB004872 2484bp DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for COR47, complete cds.
COR47; rd17.
AB010407 AB010407 7087bp DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for phosphoglycerate dehydrogenase, complete
cds.
phosphoglycerate dehydrogenase.
AB008855 AB008855 3156bp DNA PLN 14-APR-2000
Arabidopsis thaliana PED1 gene for 3-ketoacyl-CoA thiolase, complete cds.
3-ketoacyl-CoA thiolase; PED1.
AB008856 AB008856 3157bp DNA PLN 14-APR-2000
Arabidopsis thaliana gene for mutated 3-ketoacyl-CoA thiolase, complete
cds.
mutated 3-ketoacyl-CoA thiolase; ped1.
AB016570 AB016570 3260bp DNA PLN 14-APR-2000
Arabidopsis thaliana DREB2A gene, complete cds.
DREB2A.
AB016571 AB016571 3646bp DNA PLN 14-APR-2000
Arabidopsis thaliana DREB2B gene, complete cds.
DREB2B.
AB022891 AB022891 3873bp DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for glucose-1-phosphate adenylyltransferase,
complete cds.
adg2; glucose-1-phosphate adenylyltransferase.
AB030586 AB030586 4557bp DNA PLN 14-APR-2000
Arabidopsis thaliana AATL1 gene for amino acid transporter-like protein
1, complete cds.
amino acid transporter-like protein 1; AATL1.
AB022784 AB022784 3492bp DNA PLN 14-APR-2000
Arabidopsis thaliana gene for delta1-pyrroline-5-carboxylate synthetase
1, partial cds.
AtP5CS1; delta1-pyrroline-5-carboxylate synthetase 1.
AB033294 AB033294 6468bp DNA PLN 14-APR-2000
Arabidopsis thaliana DFR gene for dihydroflavonol 4-reductase, complete
cds.
DFR; dihydroflavonol 4-reductase.
AF177989 AF177989 870bp mRNA PLN 21-APR-2000
Arabidopsis thaliana alpha-soluble NSF attachment protein (aSNAP) mRNA,
complete cds.
alpha-soluble NSF attachment protein; aSNAP.
AF177990 AF177990 876bp mRNA PLN 21-APR-2000
Arabidopsis thaliana gamma-soluble NSF attachment protein (gSNAP) mRNA,
complete cds.
gamma-soluble NSF attachment protein; gSNAP.
AB039889 AB039889 5118bp DNA PLN 14-APR-2000
Arabidopsis thaliana aps1 gene for glucose-1-phosphate
adenylyltransferase, complete cds.
aps1; glucose-1-phosphate adenylyltransferase.
AC035249 AC035249 110995bp DNA HTG 21-APR-2000
Arabidopsis thaliana chromosome I clone IGF-F8D11, *** SEQUENCING IN
PROGRESS ***, 1 ordered pieces.
HTG; HTGS_PHASE2.
ATHITA0I D84248 2395bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana isolate Ita-0 Adh gene for alcohol dehydrogenase,
complete cds.
Adh; alcohol dehydrogenase.
ATHMTLP D11394 1635bp ds-DNA PLN 14-APR-2000
A. thaliana gene for metallothionein-like protein, complete cds.
chlorosis induced by iron-deficiency; cysteine rich; heavy metal-binding;
metallothionein-like protein; AtMT-1G.
ATHMYB D10936 D01155 2923bp ds-DNA PLN 14-APR-2000
A.thaliana gene encording myb homologue, complete cds.
DNA-binding protein; myb-related gene; proto-oncogene; ATMYB1 protein;
atmyb1.
ATHNIR D14824 D13812 4380bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana gene for nitrite reductase, complete cds.
nitrite reductase.
ATHPK5 D10909 4059bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana gene for serine/threonine protein kinase, complete
cds.
serine/threonine protein kinase.
ATHA10A D84240 2413bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana isolate Al-0 Adh gene for alcohol dehydrogenase,
complete cds.
Adh; alcohol dehydrogenase.
ATHACC1 D34631 1084bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana acc1 gene for acetyl-CoA carboxylase (ACC1), partial
cds (exon1-5).
ACC1; acc1; acetyl-CoA carboxylase.
ATHAPX1 D14442 X70220 3050bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for ascorbate peroxidase.
ascorbate peroxidase; APX1.
ATHRD19A D13042 3255bp ds-DNA PLN 14-APR-2000
A.thaliana rd19A gene for thiol protease, exon 1, exon 2 and exon 3.
thiol protease; rd19A.
ATHRD21A D13043 4161bp ds-DNA PLN 14-APR-2000
A.thaliana rd21A gene for thiol protease, complete cds.
thiol protease; rd21A.
D13044 D13044 8048bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for RD29B, RD29A, complete cds.
RD29A; RD29B; rd29B; rd29A.
ATHARLIM15 D45415 5135bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana ArLIM15 gene for recA-like protein, complete cds
(exon1-15).
ArLIM15; rceA-like protein; recA-like protein.
ATHYO0J D84249 2413bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana isolate Yo-0 Adh gene for alcohol dehydrogenase,
complete cds.
Adh; alcohol dehydrogenase.
ATHATMYB2 D14712 2521bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana Atmyb2 gene, complete cds.
ATMYB2; transcription factor; Atmyb2.
ATHATPK D10910 4719bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana Atpk7 gene for serine/threonine protein kinase,
complete cds.
plant protein kinase; serine/threonine protein kinase; Atpk7.
ATHATSA1 D00672 4008bp ds-DNA PLN 14-APR-2000
A.thaliana ATS1 gene for glycerol-3-phosphate acyltransferase.
ATS1; acyltransferase; glycerol-3-phosphate acyltransferase.
ATHB11B D84241 2411bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana isolate Bl-1 Adh gene for alcohol dehydrogenase,
complete cds.
Adh; alcohol dehydrogenase.
ATHBLA10C D84242 2392bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana isolate Bla-10 Adh gene for alcohol dehydrogenase,
complete cds.
Adh; alcohol dehydrogenase.
ATHBS0D D84243 2413bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana isolate Bs-0 Adh gene for alcohol dehydrogenase,
complete cds.
Adh; alcohol dehydrogenase.
ATHCDC2A D10850 3479bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana CDC2a gene for p34 protein serine/threonine kinase.
protein kinase; serine/threonine kinase; p32 protein serine/threonine
kinase; CDC2a.
ATHCDC2BG D10851 2611bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana CDC2b gene for p34 protein serine/threonine
kinase-related protein.
protein kinase; serine/threonine kinase; p32 protein serine/threonine
kinase-related protein; CDC2b.
ATHCHI0E D84244 2412bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana isolate Chi-0 Adh gene for alcohol dehydrogenase,
complete cds.
Adh; alcohol dehydrogenase.
ATHCI0F D84245 2389bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana isolate Ci-0 Adh gene for alcohol dehydrogenase,
complete cds.
Adh; alcohol dehydrogenase.
ATHCP29A D31710 4032bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana gene for chloroplast RNA-binding protein cp29,
complete cds (exon1, exon2, exon3, exon4).
chloroplast RNA-binding protein; cp29; ribonucleoprotein; single-stranded
nucleic acid-binding.
ATHCP31C D31712 4135bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana gene for chloroplast RNA-binding protein cp31,
complete cds (exon1, exon2, exon3, exon4).
chloroplast RNA-binding protein; cp31; ribonucleoprotein; single-stranded
nucleic acid-binding.
ATHCP33E D31714 3329bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana gene for chloroplast RNA-binding protein cp33,
complete cds (exon1, exon2, exon3, exon4).
chloroplast RNA-binding protein; cp33; ribonucleoprotein; single-stranded
nucleic acid-binding.
ATHCP33F D31715 1066bp ss-mRNA PLN 14-APR-2000
Arabidopsis thaliana mRNA for chloroplast RNA-binding protein cp33,
partial cds.
chloroplast RNA-binding protein; cp33; ribonucleoprotein; single-stranded
nucleic acid-binding.
ATHDCECAA D13984 4667bp ds-DNA PLN 14-APR-2000
A. thaliana ACA1 gene for chloroplast envelope Ca2+-ATPase, complete cds.
Ca2+-ATPase; chloroplast envelope Ca2+-ATPase; chloroplast envelope
Ca2+-ATPase precursor; ACA1; 'chloroplast envelope Ca2+-ATPase'.
ATHES0G D84246 2412bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana isolate Es-0 Adh gene for alcohol dehydrogenase,
complete cds.
Adh; alcohol dehydrogenase.
ATHFAD3 D26508 4250bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana fad3 gene for microsomal omega-3 fatty acid
desaturase, complete cds.
fad3; microsomal omega-3 fatty acid desaturase.
ATHFAD7 D14007 2569bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana fad7 gene for omega-3-desaturase, complete cds.
fad7 gene; omega-3 fatty acid desaturase; omega-3-desaturase; fad7.
ATHGR1H D84247 2411bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana isolate Gr-1 Adh gene for alcohol dehydrogenase,
complete cds.
Adh; alcohol dehydrogenase.
ATHER D83257 9295bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for receptor protein kinase, complete cds.
extra-cellular leucine-rich repeats; receptor protein kinase; ER.
ATHGVPE D61395 5746bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana DNA for gamma-VPE, complete cds.
gamma-VPE.
ATHAPETALA D21125 2963bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana gene for APETALA3, complete cds.
APETALA3.
ATHRD22 D10703 D01113 3499bp ds-DNA PLN 14-APR-2000
Arabidopsis thaliana rd22 gene, complete cds.
dehydration inducible protein; rd22.
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