update of TIGR Plant Gene Indices

fliang fliang at tigr.org
Thu Aug 10 15:25:32 EST 2000


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This is to inform a recent update of&nbsp; TIGR Plant Gene Indices.&nbsp;
Currently, TIGR&nbsp; maintains eightteen Gene Indices, including seven
Plant Gene Indices (Arab. Rice, Maize, Soybean, Tomato, Potato and 
Alfalfa).&nbsp;&nbsp;
Each Index can be searched through EST_id, Genbank accession, Gene name,
Lib_id as well as blast.&nbsp; As you visit the Index page, you will find
an improved web presentation. <a 
href="http://www.tigr.org/tdb/tgi.shtml">http://www.tigr.org/tdb/tgi.s 
html</a>
<p>For more information about the new release, please check the release
notes.
<br>Arab:&nbsp;&nbsp;&nbsp; <A 
HREF="http://www.tigr.org/tdb/agi/release_notes.html">http://www.tigr. 
org/tdb/agi/release_notes.html</A>
<br>Rice:&nbsp;&nbsp;&nbsp; <A 
HREF="http://www.tigr.org/tdb/ogi/release_notes.html">http://www.tigr. 
org/tdb/ogi/release_notes.html</A>
<br>Maize:&nbsp;&nbsp;&nbsp; <A 
HREF="http://www.tigr.org/tdb/zmgi/release_notes.html">http://www.tigr 
.org/tdb/zmgi/release_notes.html</A>
<br>Soybean&nbsp;&nbsp;&nbsp; <A 
HREF="http://www.tigr.org/tdb/gmgi/release_notes.html">http://www.tigr 
.org/tdb/gmgi/release_notes.html</A>
<br>Tomato:&nbsp;&nbsp;&nbsp; <A 
HREF="http://www.tigr.org/tdb/lgi/release_notes.html">http://www.tigr. 
org/tdb/lgi/release_notes.html</A>
<br>Potato:&nbsp;&nbsp;&nbsp; <A 
HREF="http://www.tigr.org/tdb/stgi/release_notes.html">http://www.tigr 
.org/tdb/stgi/release_notes.html</A>
<br>Alfalfa:&nbsp;&nbsp;&nbsp; <A 
HREF="http://www.tigr.org/tdb/mtgi/release_notes.html">http://www.tigr 
.org/tdb/mtgi/release_notes.html</A>
<p>For each Index,&nbsp; we also provide three files for local use.
<br>1.&nbsp; A fasta file containing the complete, minimally redundant
Index (TCs and singletons).
<br>2.&nbsp; A fasta file containing the complete set of TC sequences in
the Index with previous TC identities in the definition line.
<br>3.&nbsp; A file containing the TC id's and the ESTs and Genbank Transcripts
that comprise them.
<p>In addition,&nbsp; Mammal Gene Indices (human, mouse, rat and cow) have
been also updated.
<p>If you have any question regarding TIGR Plant Gene Indices,&nbsp; Please
send mail to <a href="tgi at tigr.org">tgi at tigr.org</a><a href="tgi at tigr.org"></a>
<p>Feng :Liang, PhD
<br>The Institute for Genomic Research
<br><a href="tgi at tigr.org"></a>&nbsp;</html>

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