New/Updated Arabidopsis DNA 15-Jul-2000

curator at arabidopsis.org curator at arabidopsis.org
Sat Jul 15 17:54:01 EST 2000


Dear Arabidopsis researchers,

The following information is the number of Arabidopsis entries in GenBank
that are new or were updated in the last week. These sequences have been
updated in TAIR and are available for searching using TAIR BLAST and FASTA
at:

http://arabidopsis.org/blast/

http://arabidopsis.org/cgi-bin/fasta/TAIRfasta.pl

New sequences      : 29
Updated sequences  : 0
Updated annotation : 19257

====================== New DNA Sequences =======================

AC073433    AC073433   116123bp    DNA      HTG      17-JUN-2000
     Arabidopsis thaliana chromosome I clone IGF-F19C17, *** SEQUENCING IN
      PROGRESS ***, 7 unordered pieces.
     HTG; HTGS_PHASE1.

AF159798    AF159798      652bp    mRNA     PLN      19-JUN-2000
     Arabidopsis thaliana lipid transfer protein 1 mRNA, complete cds.
     lipid transfer protein 1.

AF159799    AF159799      653bp    mRNA     PLN      19-JUN-2000
     Arabidopsis thaliana lipid transfer protein 2 mRNA, complete cds.
     lipid transfer protein 2.

AF159800    AF159800      628bp    mRNA     PLN      19-JUN-2000
     Arabidopsis thaliana lipid transfer protein 3 mRNA, complete cds.
     lipid transfer protein 3.

AF159801    AF159801      622bp    mRNA     PLN      19-JUN-2000
     Arabidopsis thaliana lipid transfer protein 4 mRNA, complete cds.
     lipid transfer protein 4.

AF159802    AF159802      654bp    mRNA     PLN      19-JUN-2000
     Arabidopsis thaliana lipid transfer protein 5 mRNA, complete cds.
     lipid transfer protein 5.

AF159803    AF159803      537bp    mRNA     PLN      19-JUN-2000
     Arabidopsis thaliana lipid transfer protein 6 mRNA, complete cds.
     lipid transfer protein 6.

AF242859    AF242859     9519bp    DNA      PLN      19-JUN-2000
     Arabidopsis thaliana fructose-6-phosphate 2-kinase/fructose-2,
      6-bisphosphatase (F2KP) gene, complete cds.
     fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase; F2KP.

AF272852    AF272852     1602bp    mRNA     PLN      19-JUN-2000
     Arabidopsis thaliana beta 1,2-xylosyltransferase mRNA, complete cds.
     beta 1,2-xylosyltransferase.

AF276301    AF276301     1180bp    mRNA     PLN      20-JUN-2000
     Arabidopsis thaliana CoA-thioester hydrolase CHY1 mRNA, complete cds;
      nuclear gene for peroxisomal product.
     CoA-thioester hydrolase CHY1.

AF106705    AF106705      840bp    mRNA     PLN      28-JUN-2000
     Arabidopsis thaliana cyclin dependent kinase inhibitor (ACK1) mRNA,
      complete cds.
     ACK1; cyclin dependent kinase inhibitor.

AF188677    AF188677     6360bp    DNA      PLN      21-JUN-2000
     Arabidopsis thaliana putative c-myb-like transcription factor (MYB3R-1)
      gene, complete cds.
     putative c-myb-like transcription factor; MYB3R-1.

AF189212    AF189212     3214bp    DNA      PLN      21-JUN-2000
     Arabidopsis thaliana putative c-myb-like transcription factor (MYB3R-1)
      gene, complete cds.
     putative c-myb-like transcription factor; MYB3R-1.

AC073506    AC073506    60047bp    DNA      HTG      20-JUN-2000
     Arabidopsis thaliana chromosome I clone IGF-F12P21, *** SEQUENCING IN
      PROGRESS ***, 4 unordered pieces.
     HTG; HTGS_PHASE1.

AF223948    AF223948     1235bp    mRNA     PLN      01-JUL-2000
     Arabidopsis thaliana biotin carboxyl carrier protein isoform 2 (BCCP2)
      mRNA, nuclear gene encoding plastid protein, complete cds.
     BCCP2; biotin carboxyl carrier protein isoform 2.

AF236873    AF236873     1249bp    mRNA     PLN      01-JUL-2000
     Arabidopsis thaliana biotin carboxyl carrier protein isoform 1 (BCCP1)
      mRNA, complete cds; nuclear gene for plastid product.
     BCCP1; biotin carboxyl carrier protein isoform 1.

AF257178    AF257178     1429bp    mRNA     PLN      05-JUL-2000
     Arabidopsis thaliana C-14 sterol reductase (FACKEL) mRNA, complete cds.
     FACKEL; C-14 sterol reductase.

AF277377    AF277377     4048bp    DNA      PLN      04-JUL-2000
     Arabidopsis thaliana 5' repair endonuclease (UVH1) gene, complete cds.
     5' repair endonuclease; UVH1.

AC073942    AC073942   112841bp    DNA      HTG      07-JUL-2000
     Arabidopsis thaliana chromosome 1 clone F16L1, *** SEQUENCING IN PROGRESS
      ***, 8 unordered pieces.
     HTG; HTGS_PHASE1.

AC073943    AC073943    63090bp    DNA      HTG      07-JUL-2000
     Arabidopsis thaliana chromosome I clone IGF-F16M22, *** SEQUENCING IN
      PROGRESS ***, 1 ordered pieces.
     HTG; HTGS_PHASE2.

AC073944    AC073944    71021bp    DNA      HTG      07-JUL-2000
     Arabidopsis thaliana chromosome I clone TAMU-T7N22, *** SEQUENCING IN
      PROGRESS ***, 4 unordered pieces.
     HTG; HTGS_PHASE1.

AF256535    AF256535     1413bp    mRNA     PLN      09-JUL-2000
     Arabidopsis thaliana sterol C-14 reductase FACKEL (FK) mRNA, complete
      cds.
     FK; sterol C-14 reductase FACKEL.

AF256536    AF256536     3992bp    DNA      PLN      09-JUL-2000
     Arabidopsis thaliana sterol C-14 reductase FACKEL (FK) gene, complete
      cds.
     sterol C-14 reductase FACKEL; FK.

AF264023    AF264023     4029bp    mRNA     PLN      09-JUL-2000
     Arabidopsis thaliana STICHEL (STI) mRNA, complete cds.
     STI; STICHEL.

AF117256    AF117256     2814bp    DNA      PLN      12-JUL-2000
     Arabidopsis thaliana lycopene beta cyclase gene, complete cds.
     lycopene beta cyclase.

AF117257    AF117257     3634bp    DNA      PLN      12-JUL-2000
     Arabidopsis thaliana lycopene epsilon cyclase gene, complete cds.
     lycopene epsilon cyclase.

AF134577    AF134577     4807bp    DNA      PLN      12-JUL-2000
     Arabidopsis thaliana zeaxanthin epoxidase gene, complete cds.
     zeaxanthin epoxidase.

AF134578    AF134578     2323bp    mRNA     PLN      12-JUL-2000
     Arabidopsis thaliana zeaxanthin epoxidase mRNA, complete cds.
     zeaxanthin epoxidase.

AC074025    AC074025    63773bp    DNA      HTG      11-JUL-2000
     Arabidopsis thaliana chromosome I clone IGF-F28G11, *** SEQUENCING IN
      PROGRESS ***, 1 ordered pieces.
     HTG; HTGS_PHASE2.


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