Secondary Structure Protein Info

varsha raja rnavarsha at yahoo.com
Sun Oct 13 19:58:22 EST 2002


We have been performing search using
http://bioinf.cs.ucl.ac.uk/psipred/
for secondary protein structures.
thanks,
Varsha Raja
(New Delhi)
--- Michael Smith <msmith at cs.fit.edu> wrote:
>
>  I am studying the Arabidopsis, specifically its
>  proteins. I am very
>  interested in obtaining primary and secondary
>  structure data of proteins,
>  whose secondary structure is known.
>
>  I recently performed a 'protein search' in an
>  attempt to obtain amino acid
>  sequences and secondary structure information of
>  various Arabidopsis'
>  proteins.
>
>  Using the SwissProt ID, I was able to obtain
>  sequence information from the
>  Swiss Prot database, however I was not able to
>  obtain secondary structure
>  information.
>
>  Can you advise, or direct me to the appropriate
>  sources, in which I can
>  find proteins for which the secondary structure is
>  known.
>
>  Mike (msmith at cs.fit.edu)
>
>  ---


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