From Witt from mpimp-golm.mpg.de Tue Dec 4 07:05:00 2007 From: Witt from mpimp-golm.mpg.de (Isabell Witt) Date: Tue Dec 4 13:22:48 2007 Subject: [Arabidopsis] doctoral fellowships IMPRS Golm Message-ID: <2103FFF56D64D64CBC81B1B5A2AAD43931972D9F58@MAIL01.mpimp-golm.mpg.de> The International Max Planck Research School in Primary Metabolism and Plant Growth (IMPRS-PMPG) offers six doctoral fellowships starting summer 2008 We are seeking students who are highly motivated to tackle scientific problems in modern plant biology. We offer cutting-edge interdisciplinary training spanning genetics, genomics, physiology, high-end analytical techniques, and bioinformatics. Doctoral studies will focus on systems-oriented approaches using the model plant Arabidopsis thaliana with an emphasis on molecular phenotyping ('omics') technologies, data integration, and modelling. Individual career development plans will be configured with the students. The IMPRS-PMPG, a joint initiative of the Max Planck Institute of Molecular Plant Physiology and the University of Potsdam, has a vibrant faculty, strong research groups, and more than 120 doctoral students. The entire programme is in English and no tuition fees apply. For further information about the programme and the online application procedure, please visit our web site at: http://www-en.mpimp-golm.mpg.de/IMPRS_GoFORSYS/index.html The Max Planck Institute of Molecular Plant Physiology is one of the largest plant research centres in Europe. Three Max Planck Institutes, two Fraunhofer Institutes, the University of Potsdam, and a new centre for start-up companies provide an excellent infrastructure for modern cross-disciplinary training. The campus is located in close proximity to the many research and educational facilities in Berlin. Further information about the institute can be found at: www.mpimp-golm.mpg.de. Applications will be accepted until February 29, 2008 Dr. Isabell Witt Scientific Coordinator Doctoral Program IMPRS-PMPG MPI-MP Am Muehlenberg 1 D-14476 Potsdam +49 (0) 331 5678 444 Witt@mpimp-golm.mpg.de From mauricio from uga.edu Mon Dec 3 17:23:44 2007 From: mauricio from uga.edu (Rodney Mauricio) Date: Tue Dec 4 13:22:53 2007 Subject: [Arabidopsis] postdoc available; University of Georgia Message-ID: UNIVERSITY OF GEORGIA DEPARTMENT OF GENETICS POSTDOCTORAL POSITION IN PLANT ECOLOGICAL GENETICS A postdoctoral position is available in my lab to examine the genetic basis of complex traits in plants. I am particularly interested in an individual with skills in QTL mapping, specifically genetic marker development in non-model species. The project is part of a larger project on the ecological genetics of adaptation in plants. I am interested in hiring someone with some background in evolutionary or ecological genetics and with excellent bench skills. The ideal candidate will be organized, pay close attention to detail, and be able to work both independently and in collaboration with others. Independent side projects on the part of the postdoc are encouraged and will be supported intellectually and financially if feasible. A Ph.D. is required There is also an opportunity for this postdoc to gain independent teaching experience (for extra pay) by teaching a small, 1-credit, discussion section for our undergraduate evolutionary biology course each semester. The start date is flexible. The initial appointment is for one year, with an additional two years' funding available conditional on satisfactory performance. The annual salary for this position will be commensurate with experience, and includes benefits. The University of Georgia is an Equal Opportunity Employer and I encourage applications from candidates from groups underrepresented in the life sciences. Please send me an e-mail (mauricio@uga.edu) with the following information: a statement detailing your interest and qualifications for the position, a CV, a statement of your research interests, and the names and contact information for 3 people who could write on your behalf. The position is available immediately and applications will be reviewed until the position is filled. The Mauricio lab is a part of the diverse and interactive UGA Department of Genetics, for which more information can be found at http://www.genetics.uga.edu/. Rodney Mauricio Department of Genetics Davison Life Sciences Building University of Georgia Athens, GA 30602-7223 mauricio@uga.edu http://www.genetics.uga.edu/mauriciolab -- Rodney Mauricio, Ph.D. Department of Genetics Phone: (706) 542-1417 University of Georgia FAX: (706) 542-3910 Athens, GA 30602-7223 e-mail: mauricio@uga.edu Lab Web Page: http://www.genetics.uga.edu/mauriciolab PIRE Grant Web Page: http://www.genetics.uga.edu/pire Evolution at UGA: http://www.genetics.uga.edu/evolution From ewalker from bio.umass.edu Tue Dec 4 10:12:25 2007 From: ewalker from bio.umass.edu (Elsbeth Walker) Date: Tue Dec 4 13:22:57 2007 Subject: [Arabidopsis] tenure track faculty position University of Massachusetts, Amherst Message-ID: <47556E59.5030208@bio.umass.edu> The Department of Biology at the University of Massachusetts at Amherst is seeking to fill three tenure-track faculty positions at the Assistant professor level. One position is in the area of Plant Metabolism. We are seeking a researcher who uses systems biology and/or functional genomic approaches to understanding plant metabolism. The area of research should be relevant to the use of plants for bioenergy, for example, carbon metabolism or biopolymer production by plants The researchers would be expected to participate in a broad multi-disciplinary initiative in Global Change Biology within the Department of Biology. This initiative bridges a group of faculty who use multiple levels of analysis to understand how rapid environmental changes are impacting populations and individual organisms, including: loss of biodiversity, rapid evolution, disruption of physiology, reduced agricultural outputs, and evolution of new pathogens. Postdoctoral experience required Applications, which should include CV, statements of research interest and teaching philosophy, and the names, addresses and e-mails of at least 3 references, should be sent to: Biology Search c/o Ms. Karen Nelson, Biology Department, University of Massachusetts, Amherst, MA 01003. It is very important that you reference the position number to which you are applying. Positions to be filled contingent upon funding. The position numbers are as follows: * Ecological Physiology R32351 * Endocrine Disruption R32352 * Plant Metabolism R32353. Evaluation of applications will begin on December 10, 2007 and continue until the positions are filled The University of Massachusetts is an Affirmative Action Equal Opportunity Employer Women and members of minority groups are encouraged to apply. The Biology Department is aggressive in its efforts to hire candidates who will enhance the diversity and general balance of the faculty and the sciences. Also see the original ad in Science at: http://aaas.sciencecareers.org/texis/jobsearch/details.html?id=4741b8194a04620&qField=All&qCity=01003&qSort=date&qMatch=all&pp=20&view=1&page=1 -- Elsbeth L. Walker Associate Professor Biology Department University of Massachusetts, Amherst 01003 Voice: 413 545-0861 Fax: 413 545-3243 From ruthwelti from gmail.com Tue Dec 4 13:52:21 2007 From: ruthwelti from gmail.com (ruthwelti@gmail.com) Date: Tue Dec 4 16:09:06 2007 Subject: [Arabidopsis] Plant Biology position at Kansas State University Message-ID: <8847aa6b-8254-41b6-be7b-689a35f9b81a@j44g2000hsj.googlegroups.com> ASSISTANT or ASSOCIATE PROFESSOR KANSAS STATE UNIVERSITY PLANT MOLECULAR BIOLOGY The Division of Biology at Kansas State University invites applications for a tenure-track Assistant or Associate Professor position beginning in the 2008/2009 academic year. We seek an individual who will establish an outstanding, extramurally funded research program within the general area of plant molecular biology. The successful candidate will complement existing strengths in molecular, cellular, and plant biology on campus, and will also contribute to graduate and undergraduate instruction to a diverse population in the Division of Biology. Minimum requirements for an appointment at the Assistant Professor rank include a Ph.D. degree and post-doctoral experience. Minimum requirements for an appointment at the Associate Professor rank include a Ph.D. degree and post-doctoral experience, plus an independent, nationally recognized research program, with current extramural funding, and demonstrated excellence in teaching. The position includes a competitive salary and start-up package. The Division of Biology (http://www.ksu.edu/biology) features a diverse, collegial, and interactive faculty who collectively bring in over $10 million per year in extramural research funding, and includes a research and graduate training program in Molecular, Cellular, and Developmental Biology (http://www.ksu.edu/ mcdb). KSU is a major research university with excellent research facilities, and is located in Manhattan, a pleasant college town of roughly 50,000 people in the rolling Flint Hills region of northeast Kansas. Applicants should indicate rank at which they wish to be considered, and should submit (either electronically or by mail) a comprehensive curriculum vitae, statement of research and teaching interests, representative publications, and have three letters of reference sent to: Dr. Ruth Welti, Chair; Plant Molecular Biology Search Committee; Division of Biology; 116 Ackert Hall; Kansas State University; Manhattan, KS 66506-4901. Email: kbiology@ksu.edu. Review of applications will begin December 10, 2007 and continue until the position is filled. KSU is an Equal Opportunity/Affirmative Action Employer, and actively seeks diversity among its employees. From vkalavacharla from desu.edu Tue Dec 4 15:36:51 2007 From: vkalavacharla from desu.edu (Venugopal Kalavacharla) Date: Tue Dec 4 16:09:12 2007 Subject: [Arabidopsis] Post Doctoral Research Associate-Plant Molecular Genetics, Dover, DE Message-ID: <007f01c836b5$cc3a9170$1d3610ac@YOUR75A2502B97> Post Doctoral Research Associate-Plant Molecular Genetics, Dover, DE DEADLINE FOR APPLICATIONS IS: January 4, 2008 The College of Agriculture and Related Sciences at Delaware State University is seeking qualified applicants for the position of Post Doctoral Research Associate-Plant Molecular Genetics. Applicants must have experience working with the genetics of plant host-pathogen interactions, construction of genomic and cDNA libraries; RNA interference is an added plus. Essential functions of the job include: 1. Conduct plant molecular genetics and genomics research and manage laboratory, greenhouse and growth room experiments. 2. Communicate effectively with faculty, students, University administrators and professional groups. 3. Provide leadership by encouraging excellence in research, education and outreach activities that are undertaken by the Plant Molecular Genetics and Genomics Group. 4. Mentor undergraduate and graduate students, technicians, and other laboratory staff in research programs. 5. Serve as a representative for activities of the Plant Molecular Genetics & Genomics Group and promote its best interests. Other functions: 1. Perform high school and community outreach. 2. Perform research in area(s) of this expertise. REQUIRED, KNOWLEDGE, SKILLS, and ABILITIES: 1. Research experience in molecular genetics and genomics. 2. Ability to work successfully with diverse students and faculty. 3. Effective written and verbal communication skills. QUALIFICATION STANDARDS: 1. Earned Ph.D. level degree and work experience in Plant Molecular Biology, Plant Molecular Genetics, or Genomics/Plant Pathology/Plant Biology. 2. Experience in advanced molecular genetic, genomic and proteomic techniques. 3. Added Plus: Prior experience in plant tissue culture, host-pathogen interactions and/or working with model or non-model plant species, management of laboratory, greenhouse, and growth room experiments and mentoring students. Letter of interest, resume and letters of recommendation can be submitted to: Dr. Venu Kalavacharla, Department of Agriculture and Related Sciences, Delaware State University, 1200 N. DuPont Highway, Dover, DE 19901. Phone: (302) 857-6492 or vkalavacharla@desu.edu or apply online at www.desu.edu under the job opportunities link. Delaware State University is an equal opportunity employer and does not discriminate because of race, creed, national or ethnic origin, sex or disability. Venu (Kal) Kalavacharla Ph.D. Plant Molecular Genetics & Genomics Department of Agriculture & Natural Resources Delaware State University Dover, DE 19901 Ph:(302) 857-6492 Fax:(302) 857-6402 Email: vkalavacharla@desu.edu From sunxx114 from umn.edu Wed Dec 5 19:07:58 2007 From: sunxx114 from umn.edu (sunxx114@umn.edu) Date: Wed Dec 5 23:29:55 2007 Subject: [Arabidopsis] Does anyone have Landsberg ecotype of Arabidopsis without erecta mutation? Message-ID: Hi, all I am currently doing genetic mapping job and using Ws and Ler as two background. However, the erecta mutation in Ler led to some problems for me. I wonder if someone has landsberg lines with normal version of ERECTA gene? Thanks a lot Xiaodong Sun Department of Plant Biology University of Minnesota, Twin Cities From ykamiya from postman.riken.jp Thu Dec 6 01:31:09 2007 From: ykamiya from postman.riken.jp (Yuji Kamiya) Date: Thu Dec 6 22:39:35 2007 Subject: [Arabidopsis] Team or unit leader of RIKEN Plant Science Center Message-ID: Team Leader or Unit Leader for the Dormancy and Adaptation Research Team of the Growth Regulation Research Group at RIKEN Plant Science Center, Yokohama Institute [Research Department] Dormancy and Adaptation Research Team, Growth Regulation Research Group Center Director: Dr. Kazuo Shinozaki Group Director: Dr. Yuji Kamiya [Profile of the Laboratory] Plant growth and development is strongly regulated by endogenous low molecular weight signaling compounds (plant hormones). In order to improve qualitative and quantitative production of plants, this team studies the molecular mechanism of dormancy and the adaptive response of plants to various environmental conditions. By using genetic, genomic and biochemical approaches, we will investigate the regulation of these processes by abscisic acid (ABA) and other adaptation related hormones. [Position, the Number of Positions Available, and Job Description] Position: Team Leader or Unit Leader (which position is offered depends on experience and performance) Number: One person Job description: Research management and promotion Application dead line is 20 December, 2007 see details at http://www.riken.jp/engn/r-world/info/recruit/071220k.html -- -- **************************************** Dr. Yuji Kamiya Director of Growth Regulation Research Group Plant Science Center, RIKEN Suehirocho 1-7-22, Tsurumi-ku, Yokohama, Japan 230-0045 Tel +81-45-503-9661 Fax +81-45-503-9662 E-mail: ykamiya@postman.riken.jp http://www.psc.riken.go.jp/eng/group/regulation/index.html **************************************** From laurent.laplaze from mpl.ird.fr Thu Dec 6 08:05:49 2007 From: laurent.laplaze from mpl.ird.fr (Laurent LAPLAZE) Date: Thu Dec 6 22:39:41 2007 Subject: [Arabidopsis] Postdoc position in Montpellier (France) Message-ID: A two-years postdoc position is open for non-french applicants at the Laboratoire de Biochimie et Physiologie Mol?culaire des Plantes located at INRA Montpellier, France. The aim of the work is to investigate auxin transport and signalling in Arabidopsis thaliana and Casuarina glauca in relation to the regulation of root development by the nitrogen nutrition of the plant (mutation in nitrate transporter genes in A. thaliana, or formation of N2-fixing nodules in C. glauca). Highly motivated applicants with a strong publication record will be considered. The requested experimental skills include a solid background in cell and molecular biology. A good experience in protein localisation will be an advantage. Montpellier is a very attractive city of southern France, with a rich academic environment in plant sciences (several universities, many research institutions). The position has to be filled by March 2008, and the salary will be modulated according to the previous research experience of the selected candidate. For more information on the research program, please contact Dr. Alain Gojon (gojon@supagro.inra.fr). This postdoc is part of a collaborative project between four laboratories: Equipe integration (http://www.bpmp.cnrs.fr/Groupes/Int%E9gration.htm); Equipe Rhizogen?se (http://www.mpl.ird.fr/rhizo); Equipe Virtual Plants (http://www-sop.inria.fr/virtualplants); and the group of Pr. M. Bennet (CPIB, University of Nottingham, UK). Applications including detailed CV, a brief description of previous work, a list of publications and the names of at least two referees must be sent to Dr. Alain Gojon (gojon@supagro.inra.fr). References from the participants of the project: Barbier de Reuille et al 2006 Proc Natl Acad Sci USA 103:1627-1632. De Smet et al. 2007 Development 134 : 962-973. Lucas et al. J. Exp. Bot. In press. Mu?os et al. 2004 Plant Cell 16: 2433-2447. P?ret et al. 2007 Plant Physiology 144 : 1852-1862. Remans et al. 2006 Proc Natl Acad Sci USA 103 : 19206-19211. -- Dr Laurent LAPLAZE Equipe Rhizogen?se UMR DIA-PC (Agro.M/INRA/IRD/UMII) Institut de Recherche pour le D?veloppement (IRD) 911, Avenue Agropolis 34394 Montpellier Cedex 5 France Tel: +33 (0)4 67 41 62 02 Fax: +33 (0)4 67 41 62 22 http://www.mpl.ird.fr/rhizo From tamara.western from mcgill.ca Thu Dec 6 12:00:16 2007 From: tamara.western from mcgill.ca (Tamara Western, Prof.) Date: Thu Dec 6 22:39:46 2007 Subject: [Arabidopsis] PhD Studentship available at McGill University In-Reply-To: <1ED204ADC861524AAC98AE8668DBAE6C045FFB16@EXCHANGE2VS2.campus.mcgill.ca> Message-ID: <1ED204ADC861524AAC98AE8668DBAE6C045FFE6E@EXCHANGE2VS2.campus.mcgill.ca> GRADUATE STUDENT POSITION MCGILL UNIVERSITY, MONTREAL, CANADA A Graduate Student position at the PhD level is available in the lab of Dr. Tamara Western at McGill University (http://biology.mcgill.ca/faculty/western/) to study cellular differentiation of mucilage secretory cells and protein production in the seed coats of Arabidopsis and flax (Linum ussitatissimum) as part of a collaborative project. The successful candidate will be a student in the McGill Biology Developmental Biology Research Initiative (DBRI). McGill Biology and the DBRI offers an exceptional research environment, and access to state of the art facilities for developmental genetics and molecular cell biology (http://biology.mcgill.ca/; http://biology.mcgill.ca/DBRI/dbri_home.htm). Candidates are expected to have a BSc or MSc degree with a solid background in genetics, molecular biology, cell biology or a related area of plant science, and previous laboratory experience in an independent research project is highly desirable. Interested candidates should send a cover letter outlining their research interests (and experience, if applicable), a curriculum vitae, and the names, email addresses and phone numbers of 3 referees to Dr. Tamara Western, Biology Department, McGill University, 1205 ave. Docteur Penfield, Montreal, QC, H3A 1B1, Canada; FAX (514) 398-5069; EMAIL tamara.western@mcgill.ca. ---------------------------- Tamara L. Western Assistant Professor Department of Biology, McGill University 1205 ave. Docteur Penfield, Montreal, QC, H3A 1B1, Canada Email: tamara.western@mcgill.ca Phone: 514-398-2574 Fax: 514-398-5069 http://biology.mcgill.ca/faculty/western/ --------------------------------------------------------- From niuyajie from wsu.edu Fri Dec 7 15:12:59 2007 From: niuyajie from wsu.edu (Niu, Yajie) Date: Fri Dec 7 15:55:00 2007 Subject: [Arabidopsis] has anybody used Sigma anti-flag M2 affinity gel Message-ID: I am now using Sigma anti-flag M2 affinity gel to Pull-down my Flag-tagged protein from transgenic plant. I used 0.1M glycine HCl,pH3.5 to elute the binding protein as Sigma suggested. But I got huge amount of antibody bands (around 50kD and 25kD)and little or nothing for my tagged protein when I used anti-flag M2 antibody for Western blot. However, I got clear result when I used the same antibody to detect my protein in protein extract from transgenic plant. Does anybody have experiences with this affinity gel or any suggestions? Thanks in advance. Yajie Niu Graduate Student Washington State University From staceyg from missouri.edu Sun Dec 9 17:53:42 2007 From: staceyg from missouri.edu (Stacey, Gary) Date: Mon Dec 10 00:14:14 2007 Subject: [Arabidopsis] Postdoctoral Positions: Proteomics and metabolomics Message-ID: <5823E86B5049E24CAE8B2203D93EBC7601763BA2@UM-XMAIL07.um.umsystem.edu> Post Doctoral positions in Soybean Proteomics and Metabolomics Two postdoctoral research associate positions are available immediately at University of Missouri-Columbia (MU) to investigate the soybean proteome and metabolome. This is a collaborative project with Prof. Dong Xu who is an expert in bioinformatics and computational biology. The successful candidates will employ GC-MS and LC-MS systems to profile proteins and metabolites in soybean seed and root tissues. Applicants should have a PhD in chemistry, biochemistry, or a related discipline reflecting a strong background in GC-MS or LC-MS analysis applied to proteomics or metabolomics. Expertise in plant biochemistry is highly desirable. Applications will be considered until suitable candidates are identified. Salary will be commensurate with experience and qualifications. Applicants should provide a letter of interest, a complete CV, and contact information for three references, to be sent to: Dr. Henry T. Nguyen (nguyenhe@missouri.edu ) and/or Dr. Gary Stacey (staceyg@missouri.edu), National Center for Soybean Biotechnology, 271 Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO 65211. University of Missouri is an equal opportunity/ADA institution From jdfriesner from ucdavis.edu Mon Dec 10 21:36:42 2007 From: jdfriesner from ucdavis.edu (Joanna Friesner) Date: Tue Dec 11 02:16:26 2007 Subject: [Arabidopsis] Initial Invited Speakers Posted for Arabidopsis meeting- 2008 Message-ID: <000001c83b9e$aaefc150$6800a8c0@mcb.ucdavis.edu> The preliminary accepted invited speakers for the 19th International Conference on Arabidopsis Research is available at: http://www.plantconferences.org/Arabidopsis2008/speakers.cfm The conference schedule is posted including plenary and concurrent session topics and the title of the Keynote Lecture by Chris Somerville. http://www.plantconferences.org/Arabidopsis2008/ Registration, abstract submission, and hotel reservations will begin on February 1st, 2008. Joanna Friesner MASC Coordinator jdfriesner@ucdavis.edu From brasiu from yahoo.com Wed Dec 12 04:34:19 2007 From: brasiu from yahoo.com (Wojciech Strzalka) Date: Wed Dec 12 12:32:44 2007 Subject: [Arabidopsis] PCNA-GFP localization problem Message-ID: <217898.45975.qm@web60714.mail.yahoo.com> Hi, I constructed runner bean GFP-PCNA fusion and shoot it to onion cells. It does not go to the nucleus. It stays in cytosol. Does anybody have some suggestion, experience? Thank you for comments Wojciech ____________________________________________________________________________________ Never miss a thing. Make Yahoo your home page. http://www.yahoo.com/r/hs From hannele.tuominen from plantphys.umu.se Thu Dec 13 06:28:07 2007 From: hannele.tuominen from plantphys.umu.se (hannele.tuominen@plantphys.umu.se) Date: Thu Dec 13 12:18:10 2007 Subject: [Arabidopsis] A postdoc position in wood formation at UPSC, Sweden Message-ID: <7dc5c2f0-be40-4238-bff4-a61eeb62f48f@s8g2000prg.googlegroups.com> A postdoc position is open within a collaborative project between Umea Plant Science Centre (UPSC) in Sweden and INRA, France. The aim of the project is to investigate the function of a glycosyl hydrolase family 1 gene (PttGH1_49) in wood formation of Populus trees. PttGH1_49 was selected on the basis of specific expression pattern in late developing xylem elements of Populus wood (Genome Biology 6/4/R34), and is therefore believed to control either cell wall modification or cell death. We have constructed PttGH1_49 RNAi lines that revealed alterations in the FT-IR spectra of the wood. The presently announced project includes further wood analytics of the RNAi lines as well as further molecular approaches to elucidate the function of the PttGH1_49. The wood analytics including pyrolysis-MS is performed in the context of the Funcfiber programme (http://www.funcfiber.se/). The position is open for one year with a possible extension for a second year. Highly motivated applicants with a good publication record will be considered. The requested experimental skills include a solid background in molecular biology. Previous experience in wood analytics such as FT-IR or pyrolysis-MS is an advantage. The salary is 15500 SEK (tax free) per month. The position is available immediately and applications will be reviewed until the position is filled. UPSC is a vibrant and international research centre within plant and forest experimental biology and biotechnology located in Umea, which is the capital of northern Sweden. Umea is an attractive university town with rich academic and cultural activities. For more information on the research program, please contact one of the partners of the collaborative project; Dr. Hannele Tuominen (Hannele.tuominen@plantphys.umu.se) or Dr. Deborah Goffner (goffner@scsv.ups-tlse.fr). Applications including detailed CV, a brief description of the previous work, a list of publications and the names of at least two referees must be sent by e-mail to: Hannele Tuominen Umea Plant Science Centre Department of Plant Physiology Ume? University 90187 Umea, Sweden Hannele.tuominen@plantphys.umu.se From smita.kurup from bbsrc.ac.uk Thu Dec 13 09:54:21 2007 From: smita.kurup from bbsrc.ac.uk (smita kurup (RRes-Roth)) Date: Thu Dec 13 12:18:17 2007 Subject: [Arabidopsis] Post-doctoral Research Scientist position in UK Message-ID: Applications are invited for a 3 year BBSRC-funded Post-Doctoral Developmental Biologist in the Crop Development and Genomics group (King group) at Rothamsted Research, Harpenden, UK. The research project will investigate "modulation of seed size in oilseed rape (Brassica napus)" using a combination of developmental, genetic and cell-biological approaches. The project involves collaboration with Professor Rod Scott (University of Bath) and with a research technician assigned to the project (based at Bath). The project will utilise knowledge of biological processes obtained in Arabidopsis to understand mechanisms controlling seed size in the related Brassica crop species. Research in the above group focuses on molecular genetics and developmental biology of rapeseed composition and productivity by utilising comparative genomics and trait dissection in model and crop plants. This work is complemented by embryo and developmental studies in Arabidopsis and Brassica. Candidates should have an excellent track record and experience in developmental biology (plant or animal) or genetics, and standard molecular techniques. Experience in embryology, cell biology, microscopy or micro-dissection would be advantageous. We are searching for an experienced post-doctoral researcher who can work independently. Candidates should be highly motivated, creative and capable of contributing productively as part of a team. Proven ability to write scientific papers is desirable. Rothamsted Research has excellent laboratory and glasshouse facilities, along with first-class support in bio-informatics, statistics and bio-imaging (http://www.rothamsted.ac.uk/). The post is funded for 36 months at Band 6-PD. The appointment is full time with a starting salary normally in the region of ?24,200 to ?27,200 per annum (pay award pending). For informal discussion, please contact Dr. Smita Kurup (smita.kurup@bbsrc.ac.uk). Apply by application form only, available with further particulars from our website www.rothamsted.bbsrc.ac.uk or from the HR Group, Rothamsted Research, Harpenden, Herts, AL5 2JQ. Please quote reference 1020. Closing date: 8 January 2008 An Equal Opportunities Employer Dr S Kurup Department of Plant Sciences Rothamsted Research Harpenden Herts AL5 2JQ Tel No. 01582 763133 ext 2589 Fax No. 01582 763010 From jelesko from vt.edu Fri Dec 14 12:02:29 2007 From: jelesko from vt.edu (John Jelesko) Date: Fri Dec 14 13:37:52 2007 Subject: [Arabidopsis] Assistant/Associate Professor in Plant/Microbial Metabolic Engineering Message-ID: <007f01c83e73$1c88aee0$559a0ca0$@edu> Plant/Microbial Metabolic Engineering Assistant/Associate Professor Virginia Polytechnic Institute and State University (Virginia Tech) The Department of Plant Pathology, Physiology & Weed Science at Virginia Tech seeks applicants for a tenure track position in Plant/Microbial Metabolic Engineering. This appointment will be at the Assistant or Associate Professor level. Research focus should be on plant metabolic engineering problems, for example in bio-design, bio-processing, bio-fuels, production of novel compounds, improved quality or yield of existing plant natural products, or other value-added traits. Programs focusing on microbial metabolic engineering towards the biotransformation of plant products will also be considered. The successful applicant is expected to: 1) develop extramurally funded research programs that become internationally recognized, 2) mentor students, and 3) team teach graduate-level core courses in plant metabolism. Additional information about the department can be found at http://www.ppws.vt.edu. Applicants must complete the application for posting number 071258 at https://www.jobs.vt.edu. A complete application must include a cover letter, curriculum vitae, and a statement of research & teaching interests, all to be submitted on-line by January 15th. In addition, applicants must arrange to have three letters of reference submitted directly to Ms. Donna Ford wlwnd@vt.edu by Jan 15th. Review of applications will begin on that date and will continue until the position is filled. Virginia Tech has a strong commitment to the principles of diversity, inclusion, and to maintaining a work and learning environment that is free of all forms of discrimination. As a result this institution does not tolerate discrimination or harassment on the basis of age, color, disability, gender, national origin, political affiliation, race, religion, sexual orientation, or veteran status. Anyone having questions concerning discrimination should contact the Office of Equal Opportunity. From jdfriesner from ucdavis.edu Fri Dec 14 17:23:09 2007 From: jdfriesner from ucdavis.edu (Joanna Friesner) Date: Sun Dec 16 00:13:59 2007 Subject: [Arabidopsis] Deadline 1/15/08: Funding opportunity for research and travel- U.S. applicants Message-ID: <000c01c7dd3f$e5c9e340$6700a8c0@mcb.ucdavis.edu> Application Deadline: January 15, 2008 Arabidopsis Research Experience for Graduate Students and Postdoctoral Fellows in the United States: funds for graduate students and postdoctoral fellows from NSF-supported U.S. laboratories engaged in Arabidopsis functional genomic projects to spend up to three months conducting Arabidopsis-related research in a host German laboratory. The program will fund airfare (up to $1,000) and a subsistence allowance during the stay (up to $1,500/mo). For full information and application procedures see: http://www.arabidopsis.org/portals/masc/funding.jsp Note next Year's Arabidopsis Conference! 19th ICAR: July 23-37, 2008 Montreal, Canada http://www.plantconferences.org/Arabidopsis2008/ From jiangyqcn from hotmail.com Mon Dec 17 13:21:11 2007 From: jiangyqcn from hotmail.com (yq Jiang) Date: Mon Dec 17 15:44:26 2007 Subject: [Arabidopsis] two-tailed t-test Message-ID: Hi colleagues, Just want to know which software do you use for statistical analysis of biological question,especially two-tailed t-test? which one would you recommend? I do not have SAS in hand and have not tried SAS yet. Thanks. Jiang _________________________________________________________________ Discover new ways to stay in touch with Windows Live! Visit the City @ Live today! http://getyourliveid.ca/?icid=LIVEIDENCA006 From satox020 from umn.edu Mon Dec 17 16:14:04 2007 From: satox020 from umn.edu (Masanao Sato) Date: Tue Dec 18 11:58:15 2007 Subject: [Arabidopsis] two-tailed t-test In-Reply-To: References: Message-ID: <30EE9A0D-D1D6-4160-8720-2B8556C06D7B@umn.edu> Hi Jiang, Try R. This is not very friendly to beginners but it is free and useful to many statistic analyses. http://cran.r-project.org/ Hope this helps, Masanao On 2007/12/17, at 07/12/17/12:21, yq Jiang wrote: > > > > Hi colleagues, > > > > > > Just want to know which software do you use for statistical > analysis of > biological question,especially two-tailed t-test? > > > which one would you recommend? I do not have > SAS in hand and have not tried SAS yet. > > > > > > Thanks. > > > > Jiang > > > _________________________________________________________________ > Discover new ways to stay in touch with Windows Live! Visit the > City @ Live today! > http://getyourliveid.ca/? > icid=LIVEIDENCA006_______________________________________________ > Arab-gen mailing list > Arab-gen@net.bio.net > http://www.bio.net/biomail/listinfo/arab-gen ================================================== Masanao Sato, Ph.D. JSPS fellow ================================================== Watanabe Lab || Katagiri Lab Department of Life Science || Center for Microbial and Graduate School of Arts || Plant Genomics and Science || Department of Plant Biology The University of Tokyo || University of Minnesota 3-8-1 Komaba, Meguro-ku || 1500 Gortner Avenue Tokyo 153-8902, JAPAN || St. Paul, MN55108, USA Phone: 81-3-5454-6776 || Phone: 1-612-624-5879 FAX: 81-3-5454-6776 || FAX: 1-612-624-6264 || E-mail: satox020@umn.edu ================================================== From subscription.jihe from gmail.com Tue Dec 18 17:22:23 2007 From: subscription.jihe from gmail.com (Ji He) Date: Tue Dec 18 17:28:47 2007 Subject: [Arabidopsis] Re: Arab-gen Digest, Vol 32, Issue 12 In-Reply-To: <200712181703.lBIH3RY15962@net.bio.net> References: <200712181703.lBIH3RY15962@net.bio.net> Message-ID: <4f2f4a5e0712181422y6cb661et72c42b41cc427e66@mail.gmail.com> Hi Jiang, If your data is not complicated, you could do the t-test in Excel. Google "excel two-tailed t-test" and you'll get a lot of hits. Many statistics tests are already built in Excel, whereas other are not hard to be done as long as you understand how their equations work and have some basic knowledge in Excel's built-in functions. Ji On Dec 18, 2007 11:03 AM, wrote: > Send Arab-gen mailing list submissions to > arab-gen@net.bio.net > > To subscribe or unsubscribe via the World Wide Web, visit > http://www.bio.net/biomail/listinfo/arab-gen > or, via email, send a message with subject or body 'help' to > arab-gen-request@net.bio.net > > You can reach the person managing the list at > arab-gen-owner@net.bio.net > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of Arab-gen digest..." > > > Today's Topics: > > 1. two-tailed t-test (yq Jiang) > 2. Re: two-tailed t-test (Masanao Sato) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Mon, 17 Dec 2007 11:21:11 -0700 > From: yq Jiang > Subject: [Arabidopsis] two-tailed t-test > To: > Message-ID: > Content-Type: text/plain; charset="iso-8859-1" > > > > > Hi colleagues, > > > > > > Just want to know which software do you use for statistical analysis of > biological question,especially two-tailed t-test? > > > which one would you recommend? I do not have > SAS in hand and have not tried SAS yet. > > > > > > Thanks. > > > > Jiang > > > _________________________________________________________________ > Discover new ways to stay in touch with Windows Live! Visit the City @ > Live today! > http://getyourliveid.ca/?icid=LIVEIDENCA006 > > ------------------------------ > > Message: 2 > Date: Mon, 17 Dec 2007 15:14:04 -0600 > From: Masanao Sato > Subject: Re: [Arabidopsis] two-tailed t-test > To: arab-gen@magpie.bio.indiana.edu > Message-ID: <30EE9A0D-D1D6-4160-8720-2B8556C06D7B@umn.edu> > Content-Type: text/plain; charset=US-ASCII; delsp=yes; format=flowed > > Hi Jiang, > > Try R. This is not very friendly to beginners but it is free and > useful to many statistic analyses. > http://cran.r-project.org/ > > Hope this helps, > Masanao > > On 2007/12/17, at 07/12/17/12:21, yq Jiang wrote: > > > > > > > > > Hi colleagues, > > > > > > > > > > > > Just want to know which software do you use for statistical > > analysis of > > biological question,especially two-tailed t-test? > > > > > > which one would you recommend? I do not have > > SAS in hand and have not tried SAS yet. > > > > > > > > > > > > Thanks. > > > > > > > > Jiang > > > > > > _________________________________________________________________ > > Discover new ways to stay in touch with Windows Live! Visit the > > City @ Live today! > > http://getyourliveid.ca/? > > icid=LIVEIDENCA006_______________________________________________ > > Arab-gen mailing list > > Arab-gen@net.bio.net > > http://www.bio.net/biomail/listinfo/arab-gen > > ================================================== > Masanao Sato, Ph.D. > JSPS fellow > ================================================== > Watanabe Lab || Katagiri Lab > Department of Life Science || Center for Microbial and > Graduate School of Arts || Plant Genomics > and Science || Department of Plant Biology > The University of Tokyo || University of Minnesota > 3-8-1 Komaba, Meguro-ku || 1500 Gortner Avenue > Tokyo 153-8902, JAPAN || St. Paul, MN55108, USA > Phone: 81-3-5454-6776 || Phone: 1-612-624-5879 > FAX: 81-3-5454-6776 || FAX: 1-612-624-6264 > || E-mail: > satox020@umn.edu > ================================================== > > > > > ------------------------------ > > _______________________________________________ > Arab-gen mailing list > Arab-gen@net.bio.net > http://www.bio.net/biomail/listinfo/arab-gen > > End of Arab-gen Digest, Vol 32, Issue 12 > **************************************** > From FVigneault from nrcan.gc.ca Tue Dec 18 20:57:42 2007 From: FVigneault from nrcan.gc.ca (=?iso-8859-1?Q?Vigneault=2C_Fr=E9d=E9ric?=) Date: Wed Dec 19 02:17:25 2007 Subject: [Arabidopsis] Re: Arab-gen Digest, Vol 32, Issue 12 References: <200712181703.lBIH3RY15962@net.bio.net> <4f2f4a5e0712181422y6cb661et72c42b41cc427e66@mail.gmail.com> Message-ID: <8C16DEDEF6DE8B418A724B298297A53013A1C9@S0-OTT-X3.nrn.nrcan.gc.ca> Excel is a poor choice when doing more than basic analysis. If you Google "doing statistical analysis in excel" you will find plenty of examples demonstrating major discrepancies between Excel and a real statistical package. Your best option would be to ask a biostatistician in your department to help you with your choice of test and software. Fred -----Original Message----- From: arab-gen-bounces@oat.bio.indiana.edu on behalf of Ji He Sent: Tue 12/18/2007 5:22 PM To: arab-gen@oat.bio.indiana.edu Subject: [Arabidopsis] Re: Arab-gen Digest, Vol 32, Issue 12 Hi Jiang, If your data is not complicated, you could do the t-test in Excel. Google "excel two-tailed t-test" and you'll get a lot of hits. Many statistics tests are already built in Excel, whereas other are not hard to be done as long as you understand how their equations work and have some basic knowledge in Excel's built-in functions. Ji On Dec 18, 2007 11:03 AM, wrote: > Send Arab-gen mailing list submissions to > arab-gen@net.bio.net > > To subscribe or unsubscribe via the World Wide Web, visit > http://www.bio.net/biomail/listinfo/arab-gen > or, via email, send a message with subject or body 'help' to > arab-gen-request@net.bio.net > > You can reach the person managing the list at > arab-gen-owner@net.bio.net > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of Arab-gen digest..." > > > Today's Topics: > > 1. two-tailed t-test (yq Jiang) > 2. Re: two-tailed t-test (Masanao Sato) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Mon, 17 Dec 2007 11:21:11 -0700 > From: yq Jiang > Subject: [Arabidopsis] two-tailed t-test > To: > Message-ID: > Content-Type: text/plain; charset="iso-8859-1" > > > > > Hi colleagues, > > > > > > Just want to know which software do you use for statistical analysis of > biological question,especially two-tailed t-test? > > > which one would you recommend? I do not have > SAS in hand and have not tried SAS yet. > > > > > > Thanks. > > > > Jiang > > > _________________________________________________________________ > Discover new ways to stay in touch with Windows Live! Visit the City @ > Live today! > http://getyourliveid.ca/?icid=LIVEIDENCA006 > > ------------------------------ > > Message: 2 > Date: Mon, 17 Dec 2007 15:14:04 -0600 > From: Masanao Sato > Subject: Re: [Arabidopsis] two-tailed t-test > To: arab-gen@magpie.bio.indiana.edu > Message-ID: <30EE9A0D-D1D6-4160-8720-2B8556C06D7B@umn.edu> > Content-Type: text/plain; charset=US-ASCII; delsp=yes; format=flowed > > Hi Jiang, > > Try R. This is not very friendly to beginners but it is free and > useful to many statistic analyses. > http://cran.r-project.org/ > > Hope this helps, > Masanao > > On 2007/12/17, at 07/12/17/12:21, yq Jiang wrote: > > > > > > > > > Hi colleagues, > > > > > > > > > > > > Just want to know which software do you use for statistical > > analysis of > > biological question,especially two-tailed t-test? > > > > > > which one would you recommend? I do not have > > SAS in hand and have not tried SAS yet. > > > > > > > > > > > > Thanks. > > > > > > > > Jiang > > > > > > _________________________________________________________________ > > Discover new ways to stay in touch with Windows Live! Visit the > > City @ Live today! > > http://getyourliveid.ca/? > > icid=LIVEIDENCA006_______________________________________________ > > Arab-gen mailing list > > Arab-gen@net.bio.net > > http://www.bio.net/biomail/listinfo/arab-gen > > ================================================== > Masanao Sato, Ph.D. > JSPS fellow > ================================================== > Watanabe Lab || Katagiri Lab > Department of Life Science || Center for Microbial and > Graduate School of Arts || Plant Genomics > and Science || Department of Plant Biology > The University of Tokyo || University of Minnesota > 3-8-1 Komaba, Meguro-ku || 1500 Gortner Avenue > Tokyo 153-8902, JAPAN || St. Paul, MN55108, USA > Phone: 81-3-5454-6776 || Phone: 1-612-624-5879 > FAX: 81-3-5454-6776 || FAX: 1-612-624-6264 > || E-mail: > satox020@umn.edu > ================================================== > > > > > ------------------------------ > > _______________________________________________ > Arab-gen mailing list > Arab-gen@net.bio.net > http://www.bio.net/biomail/listinfo/arab-gen > > End of Arab-gen Digest, Vol 32, Issue 12 > **************************************** > _______________________________________________ Arab-gen mailing list Arab-gen@net.bio.net http://www.bio.net/biomail/listinfo/arab-gen From Vdistilio from gmail.com Wed Dec 19 14:30:37 2007 From: Vdistilio from gmail.com (Veronica) Date: Wed Dec 19 19:49:59 2007 Subject: [Arabidopsis] Postdoctoral position in evolution of flower development Message-ID: <4e8dee09-ff85-4d9b-9327-e5cdd503fbdd@d4g2000prg.googlegroups.com> Position available to study the genetic and developmental basis of flower diversity in the laboratory of Dr. Ver?nica Di Stilio at the University of Washington in Seattle, WA, USA. Research is on the basal Eudicot genus Thalictrum (Ranunculaceae), using an evolution of development approach towards understanding morphological diversification of flowers. Arabidopsis is used as a reference system for candidate genes and to test gene function. Current focus is on transcription factors as key regulators of development, in particular belonging to the MYB and MADS box families, that regulate organ identity and tissue differentiation in the flower. Requirements: PhD in Plant Biology, Molecular, cellular developmental biology or related field. Basic molecular biology and microscopy skills required. Ability to perform in situ hybridizations, transgenic techniques, molecular evolution and phylogenetic analyses desired. Funding is available for 2 years beginning as early as January of 2008. Review of applications will begin immediately and continue until the position has been filled. Please send CV, research statement and 3 reference contacts to: Ver?nica Di Stilio, Department of Biology, University of Washington, Hitchcock Hall 506, Box 351800, Seattle WA 98195-1800. E-mail: distilio@u.washington.edu From HorvathDP from gmail.com Wed Dec 19 16:33:54 2007 From: HorvathDP from gmail.com (Dave Horvath) Date: Wed Dec 19 19:50:06 2007 Subject: [Arabidopsis] experience with affy 428 scanner??? Message-ID: Hi all, Our old affy 428 has started having a problem. The cy5 channel is giving about 1/2 the intensity as our cy3. I checked our hybridized chip on a different scanner and found the cy5 hybridized fine, thus I know the initial problem is with the scanner. Unfortunately, Affy no longer supports their 428. We have an in-house electronic repair guy, but his experience is limited. Has anyone out there ever heard of a similar problem in the 428s and if so, do you remember what the fix was? Any assistance would be greatly appreciated! Thanks Dave Horvath USDA/ARS Fargo ND From estelle.hrabak from unh.edu Wed Dec 19 17:01:50 2007 From: estelle.hrabak from unh.edu (Estelle Hrabak) Date: Wed Dec 19 19:50:12 2007 Subject: [Arabidopsis] Proteomics position at New Hampshire Message-ID: College of Life Sciences and Agriculture Department of Cellular, Molecular and Biomedical Sciences Tenure-Track Position in Proteomics The newly-formed Department of Cellular, Molecular and Biomedical Sciences seeks to fill a tenure-track position in Proteomics. The ideal candidate will use a proteomics approach to address questions in any area of biology (e.g. human health, agriculture, environmental or basic cellular biology). The proteomics position will be housed in the Hubbard Center for Genome Studies and join existing research groups in genomics and glycomics with a strong commitment to interdisciplinary research and teaching. Appointment may be at any level. The successful applicant will have a strong publication record, demonstrate the ability to develop/maintain a vigorous independent research program and actively participate in training of students at all levels. For more information go to: http://www.colsa.unh.edu/employment/ The University of New Hampshire is a high research activity institution with over 600 full-time faculty that provides 90 comprehensive undergraduate programs and more than 70 graduate programs to 13,000 students. UNH is located in Durham on a 188-acre campus, 60 miles north of Boston, 8 miles from the Atlantic coast, and convenient to New Hampshire's lakes and mountains. Applicants should submit a curriculum vitae, summary of research accomplishments and objectives, a brief description of teaching philosophy and goals, and the names of three references to: W. Kelley Thomas Ph.D., Chair, Proteomics Search Committee, Hubbard Center for Genome Studies, 35 Colovos Road Durham NH 03824. Review of applications will begin Feb. 1, 2008 and continue until the position is filled. The University actively seeks excellence through diversity among its administrators, faculty, staff and students and prohibits discrimination on the basis of race, color, religion, sex, age, national origin, sexual orientation, gender identity or expression, disability, veteran status, or marital status. Application by members of all underrepresented groups is encouraged. -- Estelle M. Hrabak Associate Professor, Dept. of Plant Biology Co-Chair, Genetics Graduate Program University of New Hampshire 46 College Rd. Durham, NH 03824 Ph. (603) 862-0716 FAX (603) 862-3784 From paul.silverman from valent.com Wed Dec 19 18:32:59 2007 From: paul.silverman from valent.com (paul.silverman@valent.com) Date: Wed Dec 19 19:50:18 2007 Subject: [Arabidopsis] EC 700 series power supply question Message-ID: We are doing some 2D gels in the lab to look at changes in protein abundance. In order to perform the necessary voltage gradient for the IPG strips, we 'found' an old power supply, an EC702. The power supply works (hopefully), but it has no manual. Does anyone have an EC 700 series power supply manual that I could copy? I'll pay postage! Thanks, Paul From Sigrun.Reumann from bio.uni-goettingen.de Thu Dec 20 20:24:03 2007 From: Sigrun.Reumann from bio.uni-goettingen.de (Reumann, Sigrun) Date: Fri Dec 21 13:05:52 2007 Subject: [Arabidopsis] Postdoctoral Research Associate position in Plant Molecular and Cell Biology Message-ID: <496AACD85991444AA5AFABD263EE3FAB03315273@VS2.exc.top.gwdg.de> Postdoctoral Research Associate position in Plant Molecular and Cell Biology The University of Stavanger invites applications for a two-year Postdoctoral Research Associate position in Plant Molecular and Cell Biology at The Centre for Organelle Research, Faculty of Science and Technology, beginning April 1, 2008. Project: Targeting Studies and Functional Analyses of Novel Plant Peroxisomal Proteins The targeting signals of some plant peroxisomal matrix proteins have been characterized, but these are currently insufficient to deduce mathematical models to predict novel matrix proteins from genome sequences with high accuracy. Site-directed mutage?nesis in combination with in vivo subcellular targeting studies of EYFP fusion proteins will be applied to define more precise targeting patterns. In addition, our knowledge on the physiological functions of most novel enzymes identified only recently by proteomics is restricted to their annotation. Heterologous gene overexpression, yeast complementation studies, and phenotypic characteri?za?tion of Arabidopsis T-DNA insertion lines will be instrumental in unraveling novel metabolic networks and regulatory mechanisms of plant peroxisomes. The Reumann laboratory belongs to the Centre for Organelle Research (CORE), which houses state-of-the-art equipment including a grid confocal inverted microscope. The new laboratory represents a highly active and stimulating environment and encourages cross-disciplinary and collaborative research. The project is technically and intellectually demanding and requires therefore postdoctoral researchers with experience in diverse aspects of plant physiology, molecular and cell biology, and preferably bioinformatics tools (e.g., PERL, MySQL). Key references: Sigrun Reumann et al. (2007) Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. Plant Cell (October issue) Travis Orth, Sigrun Reumann, Xinxhun Zhang, Jilian Fan, Dirk Wenzel, Sheng Quan, Jianping Hu (2007) The PEROXIN11 protein family controls peroxisome proliferation in Arabidopsis. Plant Cell 19, 333-350 Sigrun Reumann (2004) Specification of the peroxisome targeting signals type 1 and type 2 of plant peroxisomes by bioinformatics analyses. Plant Physiol. 135: 783-800 Sigrun Reumann, Changle Ma, Stefan Lemke, and Lavanya Babujee (2004). AraPerox. A database of putative Arabidopsis proteins from plant peroxisomes. Plant Physiol. 136: 2587-2608 The applications will be assessed in relation to research experience and track record. In addition, potential candidates will be invited to an interview. It is assumed that the appointee will work full time on the project and that s/he will participate in the scholarly circles at the faculty and the university. The position is salaried according to the State Salary Code, l.pl 17.510, code 1352, ltr 54 - 58, of NOK 394.900 - 424.000 per annum. In special cases higher salaries may apply. The position provides for automatic membership in the Norwegian Public Service Pension Fund, which guarantees favorable retirement benefits. Members may also apply for home investment loans at favorable interest rates. Further information about the position can be obtained from Professor Sigrun Reumann, e-mail sreuman@gwdg.de The application must contain the following documents and material in three copies: ? Cover letter including previous research experience ? CV ? the form Utvidet s?kerskjema (Information to be made available to the applicants) ? certificates/diplomas ? references ? list of publications ? up to 15 publications and other documentation that the applicant considers relevant and be addressed to: University of Stavanger Faculty of Science and Technology v/Elisabeth Stornes Fisk? N-4036 Stavanger It is preferable that the application documents are sent by e-mail to elisabeth.s.fiska@uis.no The application should be marked st.id 8200015. Closing date for applications is January 6, 2008. From job99 from mendelbio.com Fri Dec 21 13:44:50 2007 From: job99 from mendelbio.com (Mendel Biotechnology) Date: Fri Dec 21 16:24:22 2007 Subject: [Arabidopsis] Multiple Career Opportunities at Mendel Biotechnology - San Francisco Bay Area Message-ID: <20071221104450.639hkqnrww4gwokg@webmail.mendelbio.com> Several job opportunities are currently available at Mendel Biotechnology, in the San Francisco bay area. Please see the descriptions below, and refer to our website (www.mendelbio.com) for more information. ----------------------------------------- Research Scientist - Plant Systems Biology & Expression Profiling Mendel Biotechnology, Inc., invites applications for a Research Scientist position in Plant Systems Biology and Expression Profiling. The candidate needs to have expertise in both computer science, statistics or mathematics, and biology. Basic level computer programming capabilities are required, as are proven skills analyzing large sets of gene expression/microarray data as well as DNA and protein sequences. The successful applicant will work with tools for processing, analyzing and visualizing large datasets, including using mathematical models for predicting gene expression network organization and de novo identification of cis-acting promoter regulatory elements. Candidates who have previously worked with plant systems are especially encouraged to apply. Applicants must have a PhD with a minimum of 1 year postdoctoral experience. Strong written and oral communication skills in the English language are considered essential. Must be a U.S. citizen or have authorization to work in the U.S. To apply, please send a letter of interest, CV, and contact information for three references (including email addresses) to: job79+b@mendelbio.com -------------------------------------------------------------------- Research Scientist - Chemical and Genetic Screening Mendel Biotechnology, Inc., invites applications for a Research Scientist position in Chemical and Genetic Screening. The candidate must be familiar with the use of forward genetic approaches to gene discovery in Arabidopsis. In addition, the position will involve the development and characterization of in planta reporter assay systems for pathway analysis and high-throughput chemical discovery. The ability to perform in a cooperative team environment and communicate effectively in English is essential. A strong background in organic chemistry is advantageous. Applicants must have a PhD in plant biology, genetics, chemical biology or a related field. Must be a U.S. citizen or have authorization to work in the U.S. To apply, please send a letter of interest, CV, and contact information for three references (including email addresses) to: job90+b@mendelbio.com -------------------------------------------------------------------- Research Associate - Chemical and Genetic Screening Mendel Biotechnology, Inc., invites applications for a Research Associate position in Chemical and Genetic Screening. The candidate will perform both plate and soil based Arabidopsis assays to characterize genetic pathways. Experience with Arabidopsis is a necessity. A strong background in organic chemistry is desirable. Applicants must have a Bachelors degree with 2 years experience or Masters Degree in plant biology, plant genetics or related discipline. Must be a U.S. citizen or have authorization to work in the U.S. To apply, please send a letter of interest, CV, and contact information for three references (including email addresses) to: job91+b@mendelbio.com -------------------------------------------------------------------- Research Scientist - Molecular Biology Mendel Biotechnology, Inc., invites applications for a Research Scientist position in Molecular Biology. The candidate must be an expert in vector design and cloning technology; experience with high-throughput, semi-automated molecular biology techniques is highly desirable. The position will demand fluency with a suite of standard software tools (VectorNTI, Sequencher, etc.) and the use of databases to track a pipeline of projects. Strong written and oral communication skills in the English language are required. Applicants must have a PhD in molecular biology or related field and at least 2 years of post-doctoral experience. Applicants with industry experience are especially encouraged to apply. Must be a U.S. citizen or have authorization to work in the U.S. To apply, please send a letter of interest, CV, and contact information for three references (including email addresses) to: job92+b@mendelbio.com -------------------------------------------------------------------- Research Scientist - Molecular/Protein Interactions Mendel Biotechnology, Inc., invites applications for a Research Scientist position in Molecular Interactions. The candidate must have demonstrated expertise with protein chemistry techniques including co-immunoprecipitation (CoIP). Familiarity with chromatin immunoprecipitation and experience with yeast two-hybrid and other high-throughput protein-protein interaction screening methodology is also required. Preference will be given to applicants with experience working with Arabidopsis. Strong written and oral communication skills in the English language are required. Applicants must have a PhD in biochemistry, molecular biology or related field and at least 2 years of post-doctoral experience. Must be a U.S. citizen or have authorization to work in the U.S. To apply, please send a letter of interest, CV, and contact information for three references (including email addresses) to: job93+b@mendelbio.com ------------------------------------------------- Research Associates (multiple positions) - Molecular Biology and Molecular/Protein Interactions Mendel Biotechnology, Inc., invites applications for Research Associate positions in Molecular Biology and Molecular Interactions. The candidates will have previous experience with the application of a broad array of molecular biology (PCR, subcloning, bacterial and yeast transformation, etc.) and/or protein chemistry (gel electrophoresis, protein purification, blotting, etc.) techniques in a research laboratory. The positions will involve the use of laboratory automation in a high-throughput team environment, demanding comfort with both standard (Microsoft Office) and custom software applications. Applicants must have a Bachelors or Masters Degree in molecular biology, biochemistry, genetics or equivalent with a minimum of 5 years experience with a Bachelors, or 2 years with a Masters degree. Must be a U.S. citizen or have authorization to work in the U.S. To apply, please send a letter of interest, CV, and contact information for three references (including email addresses) to: job94+b@mendelbio.com ------------------------------------------------- Research Associate - Plant Molecular Biology & Plant Morphology Mendel Biotechnology, Inc., invites applications for a Research Associate position in Plant Molecular Biology. The candidate should have a good background in general genetics, DNA and RNA manipulation and isolation techniques, PCR, and plant transformation. Prior experience with Arabidopsis or other plants is desirable, but not a requirement. Applicants should have a Bachelors degree in a scientific discipline with 1-2 years experience working at the lab bench. Strong written and oral communication skills in the English language are considered essential, as is the ability to work in the US. To apply, please send a letter of interest, CV, and contact information for three references (including email addresses) to: job99+b@mendelbio.com From ebrenner from nybg.org Wed Dec 26 17:45:32 2007 From: ebrenner from nybg.org (Brenner, Eric) Date: Wed Dec 26 19:07:19 2007 Subject: [Arabidopsis] Plasmid with SFI1 site Message-ID: Hello, I am looking for a PUC based plasmid vector with a single SFI1 site in the polylinker. Cheers, -- Eric D. Brenner, Ph.D Assistant Curator Project Director The New York Plant Genomics Consortium The New York Botanical Garden 200th Street and Kazimiroff Blvd., Bronx, NY 10458 From gberkowi from nsf.gov Thu Dec 27 06:51:27 2007 From: gberkowi from nsf.gov (Berkowitz, Gerald) Date: Thu Jan 3 01:09:45 2008 Subject: [Arabidopsis] post doc sought- patch clamping Message-ID: <3CDD3C901292164BAADB4440AE9649686BC0AD@NSF-BE-02.ad.nsf.gov> Postdoc Position: Patch clamp electrophysiologist A scientist with prior patch clamp experience (including use of PClamp for current analysis) is sought to join a group characterizing plant calcium-conducting cyclic nucleotide gated channels. Channel properties as well as the role the channels play in plant innate immune signaling will be the focus of the research. The project will involve channel recordings from native plant cell membranes, as well as from oocytes and HEK cells expressing channel constructs. The scientist will have an opportunity to learn molecular biology research approaches, as well as training in use of any of the channel characterization systems. Salary: approximately $40-45,000 depending on experience. Contact: Gerry Berkowitz (gberkowi@nsf.gov). Berkowitz is currently a Program Director at the National Science Foundation (Washington D.C. area) but directs a research program at the home institution: University of Connecticut, Agricultural Biotechnology Laboratory, Storrs, CT, USA. Gerry Berkowitz, Ph.D. Program Director Physiological and Structural Systems Cluster Integrative Organismal Systems Rm 683.31 National Science Foundation 4201 Wilson Blvd., Arlington, VA 22230 Phone: 703-292-7879 Email: gberkowi@nsf.gov From gregory from salk.edu Fri Dec 28 14:36:05 2007 From: gregory from salk.edu (Brian D. Gregory) Date: Thu Jan 3 01:09:51 2008 Subject: [Arabidopsis] New Database Available Message-ID: <12C2C7A4-CA12-4CC8-8F49-FCBE23636703@salk.edu> Dear Arabidopsis Community, We would like to draw your attention to a new database that we have =20 recently released at: http://signal.salk.edu/cgi-bin/exosome. This =20 database displays a genome-wide atlas of RNA targets of the exosome =20 complex, which plays a central and essential role in RNA metabolism. =20 These genome-wide high-resolution analyses have revealed novel aspects =20= of stable structural RNA metabolism as well as uncovered numerous =20 novel exosome substrates including hundreds of noncoding RNAs, the =20 vast majority of which have not been previously described and belong =20 to a =93deeply hidden=94 layer of the transcriptome that can only be =20 visualized upon inhibition of exosome activity. We hope this database =20= will provide another useful resource to the entire community of =20 Arabidopsis researchers. Sincerely, Brian D. Gregory Postdoctoral Research Fellow Ecker Lab Salk Institute for Biological Studies= From jiangyqcn from hotmail.com Fri Dec 28 20:35:13 2007 From: jiangyqcn from hotmail.com (y Chiang) Date: Thu Jan 3 01:09:55 2008 Subject: [Arabidopsis] control aphid in growth chamber Message-ID: hi, At resarchers, I found some aphids on my plants in the growth chamber. These plants are for fungal disease study and so I want to know which pesticide should be used to kill the aphids while does not have negative effect on fungal invasion? I have End-all and Orthene in hand, but do not know if it is safe to use either of them. I know the best way to control the aphids is to sterilize the growth chamber using bleach or pesticide before planting new plants. Thanks for your input. Chiang _________________________________________________________________ Use fowl language with Chicktionary. Click here to start playing! http://puzzles.sympatico.msn.ca/chicktionary/index.html?icid=htmlsig