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[Arabidopsis] Happy SNPing

Joseph R. Ecker via arab-gen%40net.bio.net (by ecker from salk.edu)
Mon Jul 30 18:29:19 EST 2007

Dear Colleagues,

As you may know, a  very dense set of SNPs for 19 accessions was  
published by Clark et al. (see below for reference).  While TAIR has  
incorporated this information into their nice searching tool and  
seqviewer, we have also make a web search tool/browser to allow  
access to the SNPs in the context of each of the pseudochromosome  
sequences. The link to the Perlegen data is here;


Happy SNPing,


Common Sequence Polymorphisms Shaping Genetic Diversity in  
Arabidopsis thaliana Richard M. Clark, Gabriele Schweikert,  
Christopher Toomajian, Stephan Ossowski, Georg Zeller, Paul Shinn,  
Norman Warthmann, Tina T. Hu, Glenn Fu, David A. Hinds, Huaming Chen,  
Kelly A. Frazer, Daniel H. Huson, Bernhard Schölkopf, Magnus  
Nordborg, Gunnar Rätsch, Joseph R. Ecker, and Detlef Weigel  (2007)  
Science (July 20):  338-342.

Joseph R. Ecker
Professor,  The Salk Institute for Biological Studies
Plant Biology/Genomic Analysis  Laboratories
10010 North Torrey Pines Road
La  Jolla, CA 92037
Phone (858) 453-4100 x1752
FAX (858) 558-6379

Web addresses:
Administrative Assistant:

Kim Emerson
Phone (858) 453-4100 x1106
email: kemerson from salk.edu

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