[Arabidopsis] total number of genes changed from specific stress for
hypergeometric test
galonyae from post.tau.ac.il
via arab-gen%40net.bio.net
(by galonyae from post.tau.ac.il)
Mon Apr 20 01:24:18 EST 2009
Hi
I want to calculate the p-value of the enriched list of genes
(according various
classifications, such as : cold, heat, uvb ext) from my microarray
experiment, using
hypergeometric test.
For this calculation I need the total number of genes belonging to a
specific group (e.g.
cold) in a chip.
Does anyone know where can I found how many genes are changed in each
biotic or abiotic
stress. for example: how many genes are changing in a chip as a result
of cold stress (up
and down regulated)?
Thanks in advance, Yael
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