[Arabidopsis] Arobidopsis Gene Expression is newly updated
expressionbrowser from gmail.com
(by expressionbrowser from gmail.com)
Thu Aug 4 17:07:37 EST 2011
We have put new NCBI GEO dataset into
Arabidopsis Gene Expression Browser (GEB, http://www.ExpressionBrowser.com).
Current GEB includes 436 microarray experiments (http://
arab/index.jsp?tab=1), 2007 pairs of treatment over control (T/C) and
45,460,330 ratios. All ratios are tested by t-test and thus each
ratio is shown with its p-value. We can search and visualize gene
expression profiles from Gene View (to view how the 2007 experimental
conditions affect a gene) and T/C View (to view the expression changes
of 22180 genes in a condition). We also establish co-responsive
network of genes and co-regulation network of experimental conditions
network). At current time, user can only view related genes (e.g.
PR-1 gene has 229 co-responsive genes at
related conditions (e.g. the treatment 16 hr Pseudomonas infection
has 290 co-regulation conditions at http://expressionbrowser.com/arab/displayPair.jsp?id=2056966).
We are now working on developing network view of the two networks and
will release the network views in 2012.
Your suggestions and feedbacks are welcome.
GEB development team
More information about the Arab-gen