IUBio Biosequences .. Software .. Molbio soft .. Network News .. FTP

[Arabidopsis] GFF fille for snoRNAs in Arabidopsis thaliana

Loraine, Ann via arab-gen%40net.bio.net (by Ann.Loraine from uncc.edu)
Mon Apr 29 20:21:47 EST 2013


The IGBQuickLoad site for Arabidopsis TAIR10 release (June 2009) has this


Which is converted from a GFF file available at arabidopsis.org.

The file is in "bed detail" format developed by UCSC Genome
Bioinformatics. If you need help decoding the format feel free to email me
separately for assistance.

Best wishes,

Ann Loraine

Ann Loraine, Ph.D.
Associate Professor
Department of Bioinformatics and Genomics
University of North Carolina at Charlotte
North Carolina Research Campus
600 Laureate Way
Kannapolis, NC 28081
aloraine from uncc.edu

On 4/29/13 7:17 AM, "Florian Peschke" <GrandD from gmx.de> wrote:

>   Hello everybody.
>   I am looking for a gff file containing loci of snoRNAs in Arabidopsis
>   only. Of course TAIR10 wpuld be perfect. Alternatively a file for
>   non-coding RNAs would be fine too.
>   Is there anything like this out there?
>   Best regards
>   Florian
>Arab-gen mailing list
>Arab-gen from net.bio.net

More information about the Arab-gen mailing list

Send comments to us at biosci-help [At] net.bio.net