Software choice? sequencher, phrap/phred/consed, staden?

Stuart M. Brown browns02 at mcrcr.med.nyu.edu
Mon Aug 12 17:00:23 EST 1996


In article <4ufh91$ao5 at net.bio.net>, Don Gilbert
<gilbertd at bio.indiana.edu> wrote:

> Do you have opinions to share on the best choice(s) of 
> software for small-scale autosequencing?  We have recently acquired
> Sequencher, Phrap/Phred/Consed/etal, and Staden package,
> all of which can handle ABI and SCF trace data, do base calling
> and assembly.  But it will take some time to compare and evaluate
> these, so your experiences would be valuable to us and others
> starting with such software.
> 
> Thanks,  Don
> 
> --
> -- d.gilbert--biocomputing--indiana u--bloomington--gilbertd at bio.indiana.edu

I used Sequencher for two years and loved it.

-- 
Stuart M. Brown, Molecular Biology Consultant 
NYU-MC Research Computing Resource, Dept. of Cell Biology
550 First Ave, New York, NY 10016
Phone: (212)263-7689  FAX: (212)263-8139




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