Bass (ABI reading software)

Phil Davey pd at mole.bio.cam.ac.uk
Thu Jul 25 16:10:19 EST 1996


In article <4t2tjf$ig0 at net.bio.net>, Michael J. Parlee <mparlee at UVic.CA> writes:
> I've also had no luck getting Bass up and running. I tried compiling on a
> SunIPX running SunOS 4.1.3. A friend in the computer science dept. has been
> trying to work on it in his spare time for over a month now and still no
> joy.
> 
> If you find out how to compile it I'd love to hear how it's done!

Well I have finally managed to get Bass to compile.
1. I'm using Debian Linux 1.1 which installs packages automatically. However it
seems to have a problem with tcl/tk. When I installed these manually (tk4.1 and
tcl7.5) it was ok.
2. The Makefile needed tweaking. These changes may well be specific for my machine.
CC_OPTS line:
-I/usr/include/g++ added
TK_LIBRARIES line:
-L/usr/X11/lib changed to /usr/X11R6/lib
-ltk4.0 changed to -ltk4.1
-ltcl7.4 changed to -ltcl7.5
-ldl added

That's it.
Hopefully this will help anyone else who is having the same problems as me.
All I need now are some gel files to test it out on! :-)

Thanks *very* much to everyone who helped!!     
Phil
[E-mail pd at mole.bio.cam.ac.uk]




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