IUBio

Signal strength from ABI trace files?

Nirav Merchant nirav at arl.arizona.edu_no_spam
Wed Aug 11 03:29:09 EST 1999


Please download the tar file ..it includes the source code and should compile
on any *NIX platform ..it includes the binary for linux ...
ftp://public.arl.arizona.edu/pub/sware/abibasecalls.tar
It can be tailored to ouput anything from the abi trace file ..this version
outputs the signal strength. [ I have one which outputs data for excel to
create a trace]

Typical output:
 ./abibasecalls 12_1az_tmp_17303.CRO
G:76 A:68 T:63 C:88


The program was based on the skeletal code provided by Peter Kline.

"John E. Blume" wrote:

> Does anyone have a way to get the signal strengths from ABI trace files on
> a Unix platform?
>
> I'm trying to compile data from many trace files at one time.
>
> TIA,
>
> --
> John E. Blume, Ph.D.
> Metabolex, Inc.
> blume at metabolex.com




More information about the Autoseq mailing list

Send comments to us at biosci-help [At] net.bio.net