WTD:SCF viewer with rev/compl for linux

Forster, Robert ForsteR at prose.dpi.qld.gov.au
Tue Jan 23 22:24:23 EST 2001


Hello: I'm looking for a simple SCF viewer that will give me the reverse
complement of the original read. I have a large multiple alignment file in a
Linux program and I want to check the reads from the original data. Of
course some of the SCF sequence data are in the opposite orientation to the
final alignment. I would usually do this with sequencher (Mac) or Chromas
(win) but I need a linux program. Trev doesn't seem to do rev/comp. 

Anyone know of a program that would work?

Thanks

Dr Bob Forster
Visiting Research Scientist
Queensland Beef Industry Institute
Animal Research Institute
Locked Mail Bag, No. 4
Moorooka, Qld. 4105,
AUSTRALIA
Tel. +61 7 33629577
Fax. +61 7 33629429
email forster at prose.dpi.qld.gov.au



********************************DISCLAIMER****************************
The information contained in the above e-mail message or messages 
(which includes any attachments) is confidential and may be legally 
privileged.  It is intended only for the use of the person or entity 
to which it is addressed.  If you are not the addressee any form of 
disclosure, copying, modification, distribution or any action taken 
or omitted in reliance on the information is unauthorised.  Opinions 
contained in the message(s) do not necessarily reflect the opinions 
of the Queensland Government and its authorities.  If you received 
this communication in error, please notify the sender immediately and 
delete it from your computer system network.


---







More information about the Autoseq mailing list