[Automated-sequencing] Re: BS tag in ace file format

Phillip San Miguel pmiguel at purdue.edu
Wed Jul 27 09:52:49 EST 2005


Ben Horowitz wrote:
> Hi,
> 
> Does anyone know whether the BS tag in ace files reports positions
> using the padded or unpadded numbering scheme?
> 
> Here's the documentation from consed 14 (at
> http://bozeman.mbt.washington.edu/consed/distributions/README.14.0.txt):
> 
> BS <padded start consensus position> <padded end consensus position>
> <read name>
> [...]
> 


Hi Ben,

While I can't tell you for sure, the language you include above suggests 
that the padded numbering scheme is used.

You might want to email David Gorden if you are uncertain.

-- 
Philllip



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