DOS - current index of Genbank-server@uhnix2.uh.edu

Dan Davison dbd at THEORY.BCHS.UH.EDU
Mon Apr 23 18:13:14 EST 1990


Some files have been added to the DOS section of the Genbank-server at uhnix2.
uh.edu.  The complete index is shown below.  The server is accessible from
Bitnet/EARN, the Internet, Usenet, and most gatewayed networks.

For information on the Genbank-server(*), send the subject line "help"
to:
	genbank-server at uhnix2.uh.edu

and for further information on the DOS files, send the lines:
	send dos help
	send dos index

dan davison/ davison at uh.edu /DAVISON at UHOU

(*) the genbank-server at the university of Houston is not funded or
associated in any way with NIH or its GenBank contractors and subcontractors.



 Size  | last       | program      |
(bytes)| update     | name         | description
 142257 Jan  1 14:26 alx3.uue        Gotoh's alignment pgms
  94522 Jan  1 14:26 alx3src.uue     Source for above
   2768 Nov 20 19:39 decode          directions for decoding .UUE files
  55703 Jan  7 01:47 elbamap.uue     Electrophoresis band manager
 177486 Jan  1 14:26 emacsexe.uue    MicroEmacs, executables
 192098 Jan  1 14:26 emacsman.uue    MicroEmacs, documentation
  97777 Jan  1 14:26 gelpgm.uue      Thompson Gel program
   2927 Nov 20 19:40 help            help file (see note below)
  19370 Jan  1 14:26 linear.uue      
 280066 Jan  1 14:26 molecule.uue    Thompson Molecule pgm; C/EGA & Herc. vers.
 101496 Jan  1 14:26 msker232.uue    MS-Kermit 2.32/A, executable only
 194484 Jan  2 17:05 mskerdoc.uue    Documentation for MS-Kermit (>300kb)
 104185 Jan  1 14:26 oligomak.uue    Beadles et al. oligo mutant maker
 126261 Jan  2 17:05 pak201.uue      archiver used by UH & EMBL
 110237 Jan  2 17:05 pcfldsrc.uue    RNA sequence folding source
 165382 Jan  2 17:05 pcfoldex.uue    RNA sequence folding executables
 166401 Jan  1 14:26 plasmid.uue     Plasmid Paint, requires all others
  22431 Jan  1 14:26 plasmids.uue    Plasmid Paint sources
 351864 Jan  1 14:27 seqaid.uue      Roufa&Rhodes NA/P analy.,12/6/89 update
 121723 Jan  1 14:27 tdalnexe.uue    Thompson and Davison alignment executables
 130067 Jan  1 14:27 tdalnsrc.uue    Thompson and Davison source
  19430 Nov 20 19:40 uud.c           C source to a uudecoder (see note below)
   5415 Nov 20 19:40 uud19.bas       bootstrap uudecoder, use on uuembl.uue
   6238 Nov 20 19:40 uue.c           C source to a uuencoder (see note)
  33118 Oct 18 17:10 uuembl.uue      REQUIRED.  Creates UUDECODE needed
                                     for converting all these .UUE files
	                             to self-extracting .EXE files
                     uud19.bas      BASIC source code for UUDECODE.  Use
			            to create UUDECODE file that *DECODES*
	                            UUEMBL.UUE
	                            NOTE: You MUST use the UUDECODE from
				    UUEMBL.UUE to uudecode all other UUE
				    files on this server.
	                            See the file HELP, retrieve with
			            SEND SOFTWARE HELP.
                        uud.c, uue.c C source code for uuencode/uudecode.
			            Same caution applies.  Use these only
	  			    to UUDECODE UUEMBL.UUE with the
				    commmand "uud uuembl.uue" after com-
				    piling with your favorite C compiler.

			HELP        A file which gives general guidelines
			            and tips on retrieving sw from this
				    server.


If you have picked up files off the UH server before 1 January 1990 
and not been able to unpack them, get PAK201.UUE, UUDECODE it to
PAK201.EXE, type "PAK201.EXE" which will extract several files from
PAK, then run PAK on the files you retrieved:
	PAK X MOLECULE.EXE
(if the MOLECULE.UUE file uudecoded to MOLECULE.EXE),
and a working version of the software will be produced.

The UUEs were produced from files made by PAK, but without the
/EXE option, which makes self-extracting archive files.


New Additions:

*186384 Feb 24 20:53 clones.uaa    Clone, strain mgmt db., pt. 1
* 45419 Feb 24 20:53 clones.uab    Part II of above
* 193584 Feb 24 20:53 fast.uue     prot. struct. pred.
  11572 Jan 31 13:07 fv126.uue     ARC, PAK, PK, etc. File Viewer-contents
  46698 Jan 31 13:07 lharc112.uue  LHarchive utility
  74254 Feb 24 20:53 ligate.uue    ligation conditions calculation
  94719 Jan 31 13:07 list72a.uue   "more"-like utility
 126261 Jan 31 13:07 pak201.uue    PAK archiver/unarchiver
  33795 Jan 31 13:07 pkfind11.uue  Phil Katz archive file viewer
 167835 Jan 31 13:07 pkpak361.uue  Phil Katz archive/unarchiver
 190775 Jan 31 13:08 pkzip102.uue  Katz ZIP file archive/unarchiver
*107636 Feb 24 20:54 pronet.uue    Neural net prot. struct. pred.
  49563 Jan 31 13:08 scanv55.uue   Version 55 file scanner
 159950 Jan 31 13:08 shez50.uue    Full-screen arhive manipulator-friendly
   5122 Jan 31 13:08 validat3.uue  uncorruptable checksum calculator
 116224 Jan 31 13:08 zoo201.uue    ZOO archiver/unarchiver
* 44740 Apr 23 16:59 detar.uue     MS/PC DOS version of unix "tar" pgm
* 79196 Apr 23 16:59 digiseq.uue   Digitizer input of sequence data
* 88005 Apr 23 17:00 dnaclone.uue  DNA clone,strain mgmt.
*171923 Apr 23 17:00 ezfit.uue     enzyme kinetics fitting
* 28411 Apr 23 17:00 hydrasc.uue   plot 2 prot.regions w/ sim. hydro, 2nd st
* 47138 Apr 23 17:00 motif.uue     motif searching program
* 56056 Apr 23 17:00 pattern.uue   pattern searching pgm
*117350 Apr 23 17:00 predict.uue   prot. 2nd stru. predictions
*186190 Apr 23 17:00 sdse.uaa      simulation of DNA seq. evol., pt. 1
* 48094 Apr 23 17:01 sdse.uab      simulation of DNA seq. evol., pt. 2
* 62291 Apr 23 17:01 sigseq.uue    pred. of sig. seq. cleavage site
* 56638 Apr 23 17:01 typeseq.uue   seq. input with keyboard

(*) courtesy EMBL File Server.   dbd last change 4/23/90




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