Prosearch version 1.1

Lee F Kolakowski lfk at athena.mit.edu
Sun Sep 23 11:46:11 EST 1990


  Prosearch software for searching protein sequences for patterns in
the Prosite database is available from the EMBL server. 

The Prosite database is now at version 5.1. The last release of
Prosearch included data for the Prosite 5.0 database. The differences
between 5.0 and 5.1 of the database are minimal. In fact with respect
to the patterns and the description of the patterns there are *mo*
changes. As a result, there will not be an update of Prosearch at this
time. There are two minor fixes to the data, one a small error by Amos
Barioch, and one an error by me. The Fixes are below.

In file Prosite.doc the line
{PS00029; ENGRAILED} 
should be => 
{PS00033; ENGRAILED}

In prosite.regex the line
PS00267 F[IVFY]G[LM]M[G$] TACHYKININ PDOC00240
should be replaced by two lines
PS00267 F[IVFY]G[LM]M$ TACHYKININ PDOC00240
PS00267 F[IVFY]G[LM]MG TACHYKININ PDOC00240


--

Frank Kolakowski 

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|lfk at athena.mit.edu                     ||      Lee F. Kolakowski    |
|lfk at eastman2.mit.edu                   ||	M.I.T.		     |
|kolakowski at wccf.mit.edu                ||	Dept of Chemistry    |
|lfk at mbio.med.upenn.edu		        ||	Room 18-506	     |
|lfk at hx.lcs.mit.edu                     ||	77 Massachusetts Ave.|
|AT&T:  1-617-253-1866                  ||	Cambridge, MA 02139  |
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