Boxed alignment program(s)

Rodrigo Lopez rodrigol at ulrik.uio.no
Wed Mar 27 07:52:50 EST 1991


In article <9103252258.AA20111 at genbank.bio.net>,
Peter.Rice%EMBL at PUCC.PRINCETON.EDU (Peter Rice) writes:
> Dan,
> 
> >I'm looking for a program which will allow me to draw boxes around
identical
> >residues in a multiple seqence alignment.
> >
> >.....
> >
> >Surely some of the alignment programs can do this.  One which will
run on a PC
> >DOS system is preferable but a MAC would be OK too.  The third option
is an IBM
> >mainframe running VM/CMS.
> >I'd appreciate any information that you can provide, be it the
program name or
> >an FTP site which holds it.  Thanks.
> 
> Well, you did say "any information". I have a program that uses the
GCG package
> to do this, which means it can run on VAX/VMS and soon probably Unix
(when GCG
> is converted). Sadly this does not include any of the three system you
listed,
> but perhaps you have access to others.
> 
>                                         Peter Rice
> 
> 
------------------------------------------------------------------------
------
>  Peter Rice, EMBL                             | Post: Computer Group
>                                               |       European
Molecular
>  Internet:    Peter.Rice at EMBL-Heidelberg.DE   |            Biology
Laboratory
>  EARN/Bitnet: rice at embl.bitnet                |       Postfach
10-2209
>                                               |       D-6900
Heidelberg
>  Phone:   +49-6221-387247                     |       Germany

Peter,

	Which program?

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* RODRIGO LOPEZ SERRANO              Biotechnology Centre of Oslo       
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