Sequence Analysis Primer

Stephen Baird SBAIRD%UOTTAWA at ACADVM1.UOTTAWA.CA
Tue Oct 8 12:01:04 EST 1991


Peter Rice, Keith Elliston and Michael Gribskov,
       I have a few questions about chapter one that the three of you
wrote for Sequence Analysis Primer.

How were the weight matrices calculated for the sequence identification
section? Bucher (1990)?

What are the cutoff values for the eukaryotic sequence site matrices?

It also seems that figure 35 and 36 are reversed.??

    I'd like to try and use them in Chris Field's gene modeler for use with
unknown human sequence.

Stephen Baird
Molecular Genetics
Children's Hospital of Eastern Ontario




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