help with consensus sequence

[Dan Davison]

Keith Elliston said:
> Also... doesn't PIMA work with coding sequences when aligning proteins, or
> something like that?  Anyone know?

Pattern Induced Multiple Alignment, by Randy Smith and Temple Smith,
indeed works on proteins. It's on the gene-server at bchs.uh.edu
(anonymous ftp from ftp.bchs.uh.edu) and should be on the other molbio
servers.


dan
gene-server manager
-- 
dr. dan davison/dept. of biochemical and biophysical sciences/univ. of
Houston/4800 Calhoun/Houston,TX 77204-5934/davison at uh.edu/DAVISON at UHOU

-----RIP Isaac Asimov 1920-1992     I'll miss him --------------------

Disclaimer: As always, I speak only for myself, and, usually, only to
myself.