Amino Acid: Nucleotide Alignments

Elliot Lefkowitz Lefkowitz at orion.cmc.uab.edu
Thu Jan 9 22:11:49 EST 1992


	  Does anyone know of a program which will allow you to align a nucleotide
sequence given its amino acid sequence which has been previously aligned
to some other sequence(s) and may therefore contain gaps? The program could
either align the nt sequence itself based upon the alignment of the aa 
sequence, or simply an editor which would display both the aa and nt sequences
together and allow you to introduce gaps into the nt sequence where 
appropriate.

   We utilize the GCG programs on a VAX using Macs as terminals, so anything
compatible with GCG, VMS, or Mac formats would be most helpful.

Thanks for any help,
Elliot

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*  Elliot Lefkowitz            |  University of Alabama      *
*  Lefkowitz at Orion.cmc.uab.edu |  Department of Microbiology *
*  Lefkowitz at Uabcmc.Bitnet     |  Birmingham, AL  35294      *
**************************************************************




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