Restriction map comparisons
Cary O'Donnell
ODONNELL at ARCB.AFRC.AC.UK
Wed Jul 14 12:18:00 EST 1993
Sorry for yet another ... does anyone know of software that does ...?
I have had a couple of requests recently for software allowing comparison
of restriction maps from sequencs. I think the request breaks down into
two main parts:
1) Comparison of program output that list restriction sites
in a given sequence eg: GCG's MAPSORT
2) Comparison of autoradiographs of a (multiple) restriction digest.
Elaborating futher:
Building up a database of 1 or 2 & doing searches with an unknown to
identify close matches. Sounds like RFLP mapping....
Any suggestions of software, or steps to achieve the same end, before I
engage my own brain on the task?
regards
*************************************************************************
Cary O'Donnell Tel: (+44) 582 762271 ext 229
Scientific Support Group Fax: (+44) 582 761710
AFRC Computing Division
West Common JANET : odonnell at uk.ac.afrc.arcb
Harpenden Internet : odonnell at arcb.afrc.ac.uk
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