Software to graph sequence alignments

eugene veklerov veklerov at spindle.ee.lbl.gov
Fri Mar 5 16:25:50 EST 1993


In article <9303020004.AA14577 at umailsrv0.UMD.EDU> MAILER-DAEMON at UMAILSRV0.UMD.EDU (Mail Delivery Subsystem) writes:

>What I'm lookng for is a program that will take a pair of aligned
>sequences, and plot graphically, either the similarity or identity,
>and using a specifible window size, along the entire length of an

I have written a program that displays the results of sequence alignment
produced by XDAP in a graphical form.

Even though the program is pretty straight-forward, our biologists like it,
because they do a lot of sequencing and they need to visualize the output.

Eugene Veklerov




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